| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,295,611 | C→T | 6.5% | A208T (GCG→ACG) | napA ← | nitrate reductase, periplasmic, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,295,611 | 0 | C | T | 6.5% | 1210.6 / 47.0 | 339 | A208T (GCG→ACG) | napA | nitrate reductase, periplasmic, large subunit |
| Reads supporting (aligned to +/- strand): ref base C (169/147); new base T (11/11); total (181/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 345 total aligned reads displayed.
ATGCCGTTATCCGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCG > CP009273/2295463‑2295759 | tgCCGTTATCCGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAAcgcg > 1:4893867/1‑149 (MQ=255) ccGTTATCCGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTc < 1:4996266/149‑1 (MQ=255) ccGTTATCCGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTc > 1:2107823/1‑149 (MQ=255) aTCCGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCt < 1:3894941/149‑1 (MQ=255) ccGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGc > 1:2568046/1‑149 (MQ=255) aGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGAt > 2:301578/1‑149 (MQ=255) tCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAGACGCGTCAGCCTGCTCGATgtc < 2:2415800/149‑1 (MQ=255) tCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATgtc > 2:4914089/1‑149 (MQ=255) aaGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATgtcgtc > 1:3437710/1‑149 (MQ=255) aGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCa < 2:544095/149‑1 (MQ=255) gCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCAt > 1:3040666/1‑149 (MQ=255) aCGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATagc > 1:3763258/1‑149 (MQ=255) aTGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATagcagc > 2:1454270/1‑149 (MQ=255) ggtaggtaGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATc > 1:280495/1‑149 (MQ=255) gtaggtagAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCg > 1:1806578/1‑149 (MQ=255) gtaggtagAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCg > 1:3356943/1‑149 (MQ=255) aggtagAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGTTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGc > 1:428356/1‑149 (MQ=255) aggtagAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGc > 1:323081/1‑149 (MQ=255) gtagAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTc > 2:2263851/1‑149 (MQ=255) gtagAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTc > 2:4257096/1‑149 (MQ=255) agAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCAt < 1:3345785/149‑1 (MQ=255) aaaGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATcc > 1:34800/1‑149 (MQ=255) aGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCAt > 2:3824393/1‑149 (MQ=255) aGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCAt > 2:3998181/1‑149 (MQ=255) aGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCAt < 1:2009076/149‑1 (MQ=255) gCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATa > 1:812291/1‑149 (MQ=255) gCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATa > 2:2937006/1‑149 (MQ=255) cACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATAc < 1:1046001/149‑1 (MQ=255) gCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCaaa > 1:670084/1‑149 (MQ=255) ccACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAg < 2:5082814/149‑1 (MQ=255) cACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAgg < 1:355238/149‑1 (MQ=255) gACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCa < 1:3145223/149‑1 (MQ=255) gACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCa < 1:544567/149‑1 (MQ=255) gACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCa < 2:1786944/149‑1 (MQ=255) aCGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAGACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCAt > 2:1601418/1‑149 (MQ=255) cGTTCTGGTTAGAGAGACGACGGTTAGTGATGAGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATa < 2:1049170/149‑1 (MQ=255) gTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATaa < 2:3764075/149‑1 (MQ=255) ttCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATaaa > 1:1109845/1‑149 (MQ=255) tGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGcc > 2:33185/1‑149 (MQ=255) gTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGAGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCaa > 1:4498146/1‑149 (MQ=255) gagagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAactac < 1:500972/149‑1 (MQ=255) agagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAactact < 1:2924904/149‑1 (MQ=255) gagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGTGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTg > 2:4981649/1‑149 (MQ=255) gagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTg > 2:63759/1‑149 (MQ=255) gagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTg > 1:2194231/1‑149 (MQ=255) gagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTg > 2:689669/1‑149 (MQ=255) gagaCGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTg > 2:2546347/1‑149 (MQ=255) gacgacGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGcc < 2:3644319/149‑1 (MQ=255) acgGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACg > 2:2745610/1‑149 (MQ=255) acgGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACg > 1:4111539/1‑149 (MQ=255) acgGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACg > 2:789523/1‑149 (MQ=255) cgGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGc > 1:651544/1‑149 (MQ=255) ggTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGcc > 2:4322998/1‑149 (MQ=255) gTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCa < 2:2103417/149‑1 (MQ=255) ttAGTGAGGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCAt < 2:4695250/149‑1 (MQ=255) gTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACa > 1:1633768/1‑149 (MQ=255) tGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGa < 1:3684674/149‑1 (MQ=255) gcgACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGAcgc > 1:3933712/1‑149 (MQ=255) gACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGAcgcgc < 1:5056747/149‑1 (MQ=255) aCCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGAcgcgcg > 2:2516381/1‑149 (MQ=255) aCCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGAcgcgcg > 2:5117771/1‑149 (MQ=255) ccAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGt < 2:4070661/149‑1 (MQ=255) cAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGtt < 1:3793835/149‑1 (MQ=255) agagGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTc < 2:441610/149‑1 (MQ=255) agagGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTc < 2:304911/149‑1 (MQ=255) agagGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTc < 1:4611816/149‑1 (MQ=255) agGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCgg > 1:1141729/1‑149 (MQ=255) gATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGt < 2:3980949/149‑1 (MQ=255) aTCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTc < 1:2365046/149‑1 (MQ=255) ggTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGAtg < 2:717599/149‑1 (MQ=255) gTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGAtgt > 2:4463285/1‑149 (MQ=255) tGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGAtgtt < 2:2780811/149‑1 (MQ=255) tGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGAtgtt < 2:3708202/149‑1 (MQ=255) gCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGAtgttg < 1:2696125/149‑1 (MQ=255) aTTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATgttgtt > 1:1334889/1‑149 (MQ=255) ccGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGaa < 2:1351392/149‑1 (MQ=255) ccGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCAGAGCAGCCCCTCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGaa < 2:3928618/149‑1 (MQ=255) gCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACg < 2:4602490/149‑1 (MQ=255) aTGTTTGCGCCCCACAGCACAGACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGCGACGCGCGTTCGGGTCGATGTTGTTCGAACGGaa > 2:1967868/1‑149 (MQ=255) tGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAg > 2:3523870/1‑149 (MQ=255) gTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGc > 1:2293154/1‑149 (MQ=255) gTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGc < 1:889788/149‑1 (MQ=255) gTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGc < 2:607968/149‑1 (MQ=255) gTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGc < 1:4791980/149‑1 (MQ=255) tttGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGcc < 2:863182/149‑1 (MQ=255) tttGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGcc < 2:323081/149‑1 (MQ=255) tttGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGcc < 2:1658942/149‑1 (MQ=255) tttGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGcc < 1:177183/149‑1 (MQ=255) tttGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGcc < 1:1554871/149‑1 (MQ=255) ttGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGccc < 1:1373643/149‑1 (MQ=255) gcgcCCCACAGCACAGACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGc > 2:308318/1‑149 (MQ=255) gcgcCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGc < 2:26363/149‑1 (MQ=255) ccccACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCttt < 1:2426972/149‑1 (MQ=255) ccACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTaa > 2:4561757/1‑149 (MQ=255) caGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATCCAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACa > 1:602929/1‑149 (MQ=255) gCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGc < 2:1109845/149‑1 (MQ=255) acaAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCtt > 2:1535215/1‑149 (MQ=255) aaaCGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCCTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTgg > 1:4197468/1‑149 (MQ=255) aaCGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGa < 1:4387109/149‑1 (MQ=255) aCGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGAc < 2:2568046/149‑1 (MQ=255) | ATGCCGTTATCCGCCAGCTCGAAGCTACGATGCTGGTAGGTAGAAAGCACCGCCACGGTGACGTTCTGGTTAGAGAGACGACGGTTAGTGATGCGCGACCAGAGGATCGGGTGCATTTCCGCCATGTTTGCGCCCCACAGCACAAACGCGTCAGCCTGCTCGATGTCGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCG > CP009273/2295463‑2295759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |