| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,447,486 | C→T | 5.5% | pseudogene (995/2646 nt) | yfcU ← | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,447,486 | 0 | C | T | 5.5% | 1064.5 / 30.2 | 293 | pseudogene (995/2646 nt) | yfcU | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (126/149); new base T (8/8); total (136/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 304 total aligned reads displayed.
CACTCTTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATC > CP009273/2447339‑2447634 | cACTCTTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCAcc < 1:744481/149‑1 (MQ=255)cACTCTTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCAcc < 2:1879635/149‑1 (MQ=255) aCTCTTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCa > 2:2819341/1‑149 (MQ=255) ctctTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCATCaa > 2:3886885/1‑149 (MQ=255) ctTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGa < 1:3169049/149‑1 (MQ=255) ctTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGa < 1:2429189/149‑1 (MQ=255) ttGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATTCCACGTACCGGAGACGGAATCACCAAGAt > 1:1993023/1‑149 (MQ=255) aCGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGaa < 1:5075223/149‑1 (MQ=255) aCGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGaa < 2:2972589/149‑1 (MQ=255) aCGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGaa < 1:891207/149‑1 (MQ=255) aCGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCCGaa < 1:1108653/149‑1 (MQ=255) gTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACCGACCGGAGACGGAAACACCAAGAACCAGaaaa > 1:4850137/1‑147 (MQ=255) tCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATAc > 2:1609600/1‑149 (MQ=255) tCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATAc < 1:1045720/149‑1 (MQ=255) tCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCAGAATAc > 1:1690299/1‑149 (MQ=255) catcatGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGaa < 2:1729306/149‑1 (MQ=255) catcatGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCATCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGaa > 1:564915/1‑149 (MQ=255) catGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATTCGAATATGCAACGTAACGGAGAAGGAATCACCAAGATCCTGAATACGAAAcc > 1:4466980/1‑148 (MQ=255) atGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACgg > 1:132778/1‑149 (MQ=255) tGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGt < 1:3765608/149‑1 (MQ=255) tGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTAAATGCGAATATGCAACGTACCGGAGAAGGAATCAACAATATCCAGAATAAGAAACGGt > 1:3955317/1‑149 (MQ=255) taGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCgg < 2:846564/149‑1 (MQ=255) aGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGa > 1:2536949/1‑149 (MQ=255) gCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGACTACGAAACGGTCCAGCCGGaa > 2:3358078/1‑149 (MQ=255) gCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTGCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCATCAAGATCCTGAATACGAAACGGTCCAGCCGGaa > 1:2223547/1‑149 (MQ=255) cGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCATCAAGATCCTGAATACGAAACGGTCCAGCCGGAAc < 1:3036300/149‑1 (MQ=255) gAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGACTCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAAcc > 2:5122001/1‑149 (MQ=255) gAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAAcc < 1:1914040/149‑1 (MQ=255) aaCCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCt > 2:5179250/1‑149 (MQ=255) aaCCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTAATTTATTAAATTCGAATAATCAACCTAACGGAGAAGGAATCACCAAGATAATTAATAAGAAACGGTCCAGACCGaaaca > 1:1776823/1‑146 (MQ=255) tggcctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGt < 2:1194023/149‑1 (MQ=255) ggcctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGGGTATATTCAACGTACCGGAGACGGAATCACCAAGATCCTGAATAAGAAACGGTCCAGCCGGGACCTGCggt > 1:3930694/1‑147 (MQ=255) ggcctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGtt < 2:3604620/149‑1 (MQ=255) gcctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGACTCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGttt > 2:2776141/1‑149 (MQ=255) cctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTc < 1:2944790/149‑1 (MQ=255) cctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTc < 2:2865720/149‑1 (MQ=255) cctggGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTc < 1:4595816/149‑1 (MQ=255) gggCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCATCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTa > 2:435925/1‑149 (MQ=255) gggCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTa < 1:2605528/149‑1 (MQ=255) gggCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCGGTTCTTCAATGCGAATATGCAACCTACCCGAGACGGAATCACCAAGATCCAGAATACGCAACCGTCCAGCCCGAACCAGCGGTTCGTa > 1:4388283/1‑149 (MQ=255) gCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTaaa < 1:1132656/149‑1 (MQ=255) gAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATc < 2:6670/149‑1 (MQ=255) gAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATc < 2:1377656/149‑1 (MQ=255) aGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATca < 2:3281897/149‑1 (MQ=255) tGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATcaca < 2:1457968/149‑1 (MQ=255) tGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATcaca < 1:574347/149‑1 (MQ=255) tATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGccc > 2:3756251/1‑149 (MQ=255) gCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATc < 1:3457314/149‑1 (MQ=255) gCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATc < 1:2436699/149‑1 (MQ=255) cATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCt < 2:3861021/149‑1 (MQ=255) tCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGCACCTGCGTTTCGTAAATCACACGCCCCAACTgg > 1:2785470/1‑149 (MQ=255) gAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCt < 2:3867395/149‑1 (MQ=255) ggCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGa < 2:5002957/149‑1 (MQ=255) tGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTc < 1:3802940/149‑1 (MQ=255) gCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCa > 2:4453590/1‑149 (MQ=255) gCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCa < 2:1972190/149‑1 (MQ=255) cTGATGTCATATTCCTGCACCTGGCCGTTGGGTTCTTCAATGCGCATATGCAACGTACCGGCGACGGAATCACCAAGATACAGAATACGAAACGGTCCCGCCGGAACCAGCGTTTAGTAAATCACACCCCCCAGCAGGCTGACGGTCAc > 1:3575654/1‑149 (MQ=255) gATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACtt > 2:1641675/1‑149 (MQ=255) aTGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACttt < 2:2826005/149‑1 (MQ=255) aTGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACttt < 2:4595695/149‑1 (MQ=255) tatTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCtgt < 2:248997/149‑1 (MQ=255) ccTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTgtggtg < 1:214198/149‑1 (MQ=255) tGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGgtgtg < 2:1019871/149‑1 (MQ=255) gCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGgtgtgt < 2:2622893/149‑1 (MQ=255) tGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCAc < 2:2412721/149‑1 (MQ=255) tGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCAGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCAc > 1:4220916/1‑149 (MQ=255) gCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGc > 1:1640917/1‑149 (MQ=255) gttctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCATCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCgg < 1:435925/149‑1 (MQ=255) ttctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGa > 1:4060067/1‑149 (MQ=255) ttctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGa > 2:47150/1‑149 (MQ=255) ctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGaaa > 2:4113351/1‑149 (MQ=255) tgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCATCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAAt < 1:3886885/149‑1 (MQ=255) tgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAAt < 1:1202014/149‑1 (MQ=255) tgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAAt > 1:3342362/1‑149 (MQ=255) ttcttcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGt < 2:4915604/149‑1 (MQ=255) tcttcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTc < 1:427881/149‑1 (MQ=255) tcttcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTc < 2:2233832/149‑1 (MQ=255) cttcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCt > 2:3417717/1‑149 (MQ=255) aaTGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGgcg > 2:585305/1‑149 (MQ=255) tGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGcgcg > 1:2911535/1‑149 (MQ=255) aaTATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGc < 1:4127104/149‑1 (MQ=255) aaTATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGc > 1:2705520/1‑149 (MQ=255) tatGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCcg > 1:3898336/1‑149 (MQ=255) ccGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTggg > 2:738079/1‑149 (MQ=255) cGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGa < 1:2167980/149‑1 (MQ=255) cGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGa < 1:671961/149‑1 (MQ=255) gagaCGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAgg < 1:4154737/149‑1 (MQ=255) gagaCGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAgg < 1:1451291/149‑1 (MQ=255) gaCGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCa > 1:920930/1‑149 (MQ=255) ggAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACa < 2:3966403/149‑1 (MQ=255) ggAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACa < 1:3380979/149‑1 (MQ=255) gAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAt < 2:3663170/149‑1 (MQ=255) gAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAt < 2:1993023/149‑1 (MQ=255) aaTCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAtt < 2:2598019/149‑1 (MQ=255) aTCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAttt > 1:4903658/1‑149 (MQ=255) aTCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAttt < 2:2071553/149‑1 (MQ=255) tCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTg < 2:226348/149‑1 (MQ=255) aCCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGAt < 1:4033768/149‑1 (MQ=255) ccAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATc > 1:4093873/1‑149 (MQ=255) ccAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATc < 1:5122001/149‑1 (MQ=255) | CACTCTTGCGGACGTCCCATCATGATCTTATAGCGAACCTGGCCTGGGCGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATC > CP009273/2447339‑2447634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |