| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,544,288 | C→A | 5.9% | V96V (GTG→GTT) | yfeY ← | RpoE‑regulated lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,544,288 | 0 | C | A | 5.9% | 1524.6 / 50.7 | 390 | V96V (GTG→GTT) | yfeY | RpoE‑regulated lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (203/164); new base A (11/12); total (214/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
Only 100 of 394 total aligned reads displayed.
GATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTAATTCAC > CP009273/2544140‑2544436 | gATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATc < 1:494078/149‑1 (MQ=255)gATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATc > 2:4041743/1‑149 (MQ=255) ttATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCAc > 1:875968/1‑149 (MQ=255) tATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCAcc < 1:3298241/149‑1 (MQ=255) catcaCCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATc < 1:279551/149‑1 (MQ=255) tcaCCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGc < 1:3038123/149‑1 (MQ=255) caCCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGcc > 1:1650245/1‑149 (MQ=255) aTCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGt < 1:2806479/149‑1 (MQ=255) aTCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGt > 2:4977142/1‑149 (MQ=255) tCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGtt > 2:1967535/1‑149 (MQ=255) tCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGtt > 1:3772199/1‑149 (MQ=255) aGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGt < 1:157180/149‑1 (MQ=255) aGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGt > 1:4998114/1‑149 (MQ=255) aGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGt > 1:1237558/1‑149 (MQ=255) gCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTc < 1:1812042/149‑1 (MQ=255) gCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTc > 2:845454/1‑149 (MQ=255) tttGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGccc < 1:2647078/149‑1 (MQ=255) tGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCtt < 1:14799/149‑1 (MQ=255) aTTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTtcatca < 1:3566931/149‑1 (MQ=255) ttGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCAc > 1:2413985/1‑149 (MQ=255) cAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCa > 1:2052943/1‑149 (MQ=255) aaaTGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCaa > 2:1173736/1‑149 (MQ=255) aaaTGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCaa > 2:2358915/1‑149 (MQ=255) aaTGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCaaa > 1:4640400/1‑149 (MQ=255) aTGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCaaaa > 1:4831471/1‑149 (MQ=255) cTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAg > 2:4776993/1‑149 (MQ=255) tttGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAgc > 2:3172156/1‑149 (MQ=255) tGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAgcgc < 2:4466472/149‑1 (MQ=255) gCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGca < 2:3621484/149‑1 (MQ=255) gCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATAACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGca > 1:423996/1‑149 (MQ=255) gCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGCTGTCAGCAGGAATATCGCTATCCAGCACGACAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACATCAAAAAAGCGca > 2:2672825/1‑149 (MQ=255) cTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGcac < 1:3917508/149‑1 (MQ=255) aaGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGt > 1:174670/1‑149 (MQ=255) gTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGc < 2:4084756/149‑1 (MQ=255) gCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGt > 2:1544419/1‑149 (MQ=255) cTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGtt < 2:1733804/149‑1 (MQ=255) cTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGtt > 2:1275106/1‑149 (MQ=255) gtgtACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGtt < 1:5199568/149‑1 (MQ=255) tACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCATCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCTCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTc < 2:348632/149‑1 (MQ=255) tACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTc > 1:117414/1‑149 (MQ=255) ccGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCAt > 1:4351428/1‑149 (MQ=255) gATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTc > 1:2587685/1‑149 (MQ=255) gATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTc < 1:935399/149‑1 (MQ=255) gATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTACAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTc > 1:987663/1‑149 (MQ=255) aTTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTcc > 1:2944556/1‑149 (MQ=255) aTTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTcc > 1:4593038/1‑149 (MQ=255) aTTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTcc > 1:2328605/1‑149 (MQ=255) tAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTg > 2:4677432/1‑149 (MQ=255) aaCACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTgc < 2:415151/149‑1 (MQ=255) cGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAgg > 2:3798116/1‑149 (MQ=255) ggTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGc > 1:756674/1‑149 (MQ=255) gtCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGAt > 2:2527800/1‑149 (MQ=255) gtCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGAt < 1:2274357/149‑1 (MQ=255) gcagGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATc > 1:4139861/1‑149 (MQ=255) tatCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCa > 2:4395910/1‑149 (MQ=255) tCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAg > 1:781371/1‑149 (MQ=255) cTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGGCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGGTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAgcgc > 2:4501462/1‑149 (MQ=255) tATCCAGCACGTCACTGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCa < 2:3224475/149‑1 (MQ=255) aTCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCAt > 2:5114854/1‑149 (MQ=255) tCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATc > 2:643467/1‑149 (MQ=255) aGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGc > 1:3828202/1‑149 (MQ=255) aGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGc > 2:2001244/1‑149 (MQ=255) gCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCa > 2:1296900/1‑149 (MQ=255) gCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCa < 2:3648271/149‑1 (MQ=255) cACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCaa < 2:2254235/149‑1 (MQ=255) aCGTCACTGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTACAAAAAAGCGCACCACGGTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAAt < 2:3245481/149‑1 (MQ=255) aCGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAAt < 1:3144808/149‑1 (MQ=255) tCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGc > 1:1025636/1‑149 (MQ=255) aaTGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCtt < 2:2450439/149‑1 (MQ=255) tGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGt > 2:2083534/1‑149 (MQ=255) tGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGt > 2:1350151/1‑149 (MQ=255) gCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGtt < 1:3481025/149‑1 (MQ=255) cGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTc < 1:4487798/149‑1 (MQ=255) gACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCt < 2:1166724/149‑1 (MQ=255) gACTGATCGTGCCTTGATCGCCGTTAATAACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCt < 1:1918117/149‑1 (MQ=255) aCTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCtt < 1:3940964/149‑1 (MQ=255) gATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCa > 1:3695438/1‑149 (MQ=255) gATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCa > 1:4059811/1‑149 (MQ=255) gATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCa > 1:142425/1‑149 (MQ=255) gATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCa < 1:3602623/149‑1 (MQ=255) gATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCa > 2:2073517/1‑149 (MQ=255) gATCGTGCCTTGATCGCCGTTAATAACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCa < 2:423996/149‑1 (MQ=255) gTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAgtgg < 1:3236198/149‑1 (MQ=255) tGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAgtggt < 2:1603714/149‑1 (MQ=255) cTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGtgtg < 2:1671778/149‑1 (MQ=255) cTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGtgtg > 2:2281560/1‑149 (MQ=255) cTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTCGTTCTTGCAGTGGtgtg < 2:185104/149‑1 (MQ=255) ttGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTgg < 2:901237/149‑1 (MQ=255) tGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGa < 2:4555203/149‑1 (MQ=255) gATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGAc < 2:3127512/149‑1 (MQ=255) gATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGAc < 2:4923536/149‑1 (MQ=255) tCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGc > 2:4272339/1‑149 (MQ=255) tCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGc > 2:3347246/1‑149 (MQ=255) cGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGtt > 1:1349393/1‑149 (MQ=255) ttAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTaa < 2:4010365/149‑1 (MQ=255) ttAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTaa > 2:2833244/1‑149 (MQ=255) ttAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTaa > 1:5125049/1‑149 (MQ=255) aaTCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTAAtt > 2:1151156/1‑149 (MQ=255) aaTAACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTAAtt > 2:5031924/1‑149 (MQ=255) aTCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTAATTc > 1:439589/1‑149 (MQ=255) | GATTATCATCACCATCAGCTTTTTGGCAATTGCCAAATGCTTTGCTGTAAAGGTCGCTAAACGGTGTACCGATTTTAACACCGGTGTCAGCAGGAATATCGCTATCCAGCACGTCAATGCGACTGATCGTGCCTTGATCGCCGTTAATCACCATCGCCACGTTGTCGCCCTTCATCACTTCAAAAAAGCGCACCACGTTGCCGTTCGCGGTTTTCATTCCGCTGCGCAGGCGATAATCGCCATCAAGCGCATCGGCAATGGCTTGTTCTTGCAGTGGTGTGGACGCCGTTAATTCAC > CP009273/2544140‑2544436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |