| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,631,037 | G→T | 6.4% | R325R (CGC→CGA) | bamB ← | BamABCDE complex OM biogenesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,631,037 | 0 | G | T | 6.4% | 1213.1 / 43.4 | 313 | R325R (CGC→CGA) | bamB | BamABCDE complex OM biogenesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (141/152); new base T (10/10); total (151/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 316 total aligned reads displayed.
GCGGCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTCGCGTTTCCACATAATCT > CP009273/2630891‑2631185 | gCGGCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCg > 1:1409968/1‑149 (MQ=255)gCGGCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCg > 2:2357863/1‑149 (MQ=255) ggCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGAt < 1:4233055/149‑1 (MQ=255) ggCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGAt < 1:4337669/149‑1 (MQ=255) gCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATg > 2:3086724/1‑149 (MQ=255) gCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATg < 2:4248876/149‑1 (MQ=255) ccGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATgcagc < 1:503613/149‑1 (MQ=255) ccGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATgcagc < 1:1284599/149‑1 (MQ=255) ccGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCCTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATgcagc < 2:1416227/149‑1 (MQ=255) ggTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGcagcag > 1:2612168/1‑149 (MQ=255) gTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGa < 1:235009/149‑1 (MQ=255) tCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATc > 1:4553454/1‑149 (MQ=255) aGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGc < 2:253558/149‑1 (MQ=255) tCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCtt < 1:228364/149‑1 (MQ=255) tCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCtt > 1:3550677/1‑149 (MQ=255) aaCCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTc > 1:4510635/1‑149 (MQ=255) ccGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCTTTGTGTCca < 1:1972547/149‑1 (MQ=255) cGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCcac > 2:3440114/1‑149 (MQ=255) aaCTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGc > 2:742435/1‑149 (MQ=255) tATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTa > 1:2010308/1‑149 (MQ=255) aTCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTaa > 1:4667308/1‑149 (MQ=255) aTCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTaa < 1:1354903/149‑1 (MQ=255) aaCTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAAcgc < 2:1997823/149‑1 (MQ=255) aCTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAAcgcc < 2:4553473/149‑1 (MQ=255) aCTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAAcgcc < 1:5128675/149‑1 (MQ=255) tGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATc > 2:1041531/1‑149 (MQ=255) gCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCa > 2:4634258/1‑149 (MQ=255) tGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAAt > 1:3426689/1‑149 (MQ=255) tGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAAt > 1:981660/1‑149 (MQ=255) ggCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATCCAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATgg < 1:3029078/149‑1 (MQ=255) ggCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATgg < 1:3029145/149‑1 (MQ=255) ggCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATgg < 1:2251326/149‑1 (MQ=255) cAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTc > 2:3718785/1‑149 (MQ=255) aacgaaacgaCCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCa > 2:546883/1‑149 (MQ=255) acgaaacgaCCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCGTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCaa > 2:3947507/1‑149 (MQ=255) gaaacgaCCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTAGCCATTATACAGAACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCATTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACg > 1:786352/1‑149 (MQ=255) aaacgaCCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAANGc < 1:2094554/149‑1 (MQ=255) aacgaCCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGcc < 2:2662345/149‑1 (MQ=255) aacgaCCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGcc > 2:2108072/1‑149 (MQ=255) ccATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCAc > 2:5121467/1‑149 (MQ=255) ttCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGt > 2:1717733/1‑149 (MQ=255) aCGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCAtt < 1:3594096/149‑1 (MQ=255) aCGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCAtt < 1:4985641/149‑1 (MQ=255) cGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCAttt > 2:122765/1‑149 (MQ=255) cGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCAttt < 2:5183561/149‑1 (MQ=255) ttAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTg < 1:104492/149‑1 (MQ=255) ttAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTg < 1:1218415/149‑1 (MQ=255) ttAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTg > 2:2871771/1‑149 (MQ=255) tAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGa < 1:4452065/149‑1 (MQ=255) aaTCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTgtt < 1:4810272/149‑3 (MQ=255) aaTCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGAt < 2:4136427/149‑1 (MQ=255) aTCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATc > 1:3176465/1‑149 (MQ=255) gCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCaga < 1:3286405/149‑1 (MQ=255) gCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCaga < 1:3707736/149‑1 (MQ=255) cAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCagat > 1:3517043/1‑149 (MQ=255) gATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCagatag > 1:1968635/1‑149 (MQ=255) tAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCTTTTTGATCGACCagatagat < 1:1586574/149‑1 (MQ=255) tAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCagatagat > 2:841437/1‑149 (MQ=255) tAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCagatagat < 2:1182352/149‑1 (MQ=255) aCCTTCACTGTCACCGACCACCCGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGc < 1:2756595/149‑1 (MQ=255) ccTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCg < 1:2416006/149‑1 (MQ=255) ttCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGAt < 2:3906480/149‑1 (MQ=255) cTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGcc > 2:1141977/1‑149 (MQ=255) cTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGcc > 2:320752/1‑149 (MQ=255) cTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGcc < 1:2568120/149‑1 (MQ=255) tGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCg > 1:3842961/1‑149 (MQ=255) gTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGt < 2:3799234/149‑1 (MQ=255) tCACCGACCACTAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTc > 2:3377585/1‑149 (MQ=255) tCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTc > 1:2937333/1‑149 (MQ=255) cACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTcg < 1:3614353/149‑1 (MQ=255) cACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTcg > 2:674939/1‑149 (MQ=255) gACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTcgacga > 1:2396772/1‑149 (MQ=255) accaccAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGAt < 1:1720708/149‑1 (MQ=255) ccaccaGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATg > 2:4843483/1‑149 (MQ=255) ccaccaGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATg > 2:4356331/1‑149 (MQ=255) caccaGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGa > 1:2669792/1‑149 (MQ=255) accaGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGaa < 2:131454/149‑1 (MQ=255) ccaGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGaaa < 2:1368352/149‑1 (MQ=255) ggTTGCCATTATACAGCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCa < 1:2499234/149‑1 (MQ=255) ggTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCa < 1:1639741/149‑1 (MQ=255) ggTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCa > 2:1245709/1‑149 (MQ=255) ttGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCAtt > 1:3753472/1‑149 (MQ=255) tGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTc < 2:3289/149‑1 (MQ=255) ccATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAAACATTCAc < 1:1456851/149‑1 (MQ=255) aTTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCg > 2:2745415/1‑149 (MQ=255) ttATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGa < 2:2298931/149‑1 (MQ=255) ataCAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAAc > 1:4076633/1‑149 (MQ=255) ataCAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATAACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAAc < 2:2511043/149‑1 (MQ=255) aCAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAAccc > 1:1847517/1‑149 (MQ=255) aGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAg < 2:183285/149‑1 (MQ=255) gCACCGGAGAAGTCAGCAGTCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGt > 2:4069041/1‑149 (MQ=255) cACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGtt < 2:3378605/149‑1 (MQ=255) cACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGtt < 2:1788305/149‑1 (MQ=255) aCCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTc > 2:2976467/1‑149 (MQ=255) aCCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTc < 2:2855751/149‑1 (MQ=255) cGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTcgc > 2:2901912/1‑149 (MQ=255) gagaAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTCGCGt > 2:2206455/1‑149 (MQ=255) aaGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTCGCGTTTc < 1:1270360/149‑1 (MQ=255) tCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTCGCGTTTCcac < 2:3550677/149‑1 (MQ=255) gCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTCGCGTTTCCACATAATCt < 2:485812/149‑1 (MQ=255) | GCGGCAACCGGTTCAGTCTGGAAACCGGAACTATCAACTTTTTGCTGGGCAACGAAACGACCATCTTCGACGTTAATCCAGTGCAGATAACCTTCACTGTCACCGACCACCAGGTTGCCATTATACAGCACCGGAGAAGTCAGCAGGCGATGCAGCAGATCGCTTTGTGTCCACAGCGTAACGCCGCCATCAATGGTCAACGCCATCACCCGGTCATTTTGATCGACCAGATAGATGCGATTGCCGTCGACGATGAAATCATTCACCGAACCCAGTTCGCGTTTCCACATAATCT > CP009273/2630891‑2631185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |