| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,869,269 | C→A | 7.1% | E140D (GAG→GAT) | cysD ← | sulfate adenylyltransferase, subunit 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,869,269 | 0 | C | A | 7.1% | 1130.0 / 45.7 | 308 | E140D (GAG→GAT) | cysD | sulfate adenylyltransferase, subunit 2 |
| Reads supporting (aligned to +/- strand): ref base C (147/137); new base A (8/16); total (155/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.24e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 321 total aligned reads displayed.
TCCAGTTAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGCCTTCCGGGTTTT > CP009273/2869121‑2869417 | ccAGTTAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTtct < 1:3694156/149‑1 (MQ=255) ccAGTTAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTtct < 2:4294427/149‑1 (MQ=255) aGTTAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTctct > 2:4405827/1‑149 (MQ=255) gTTAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCtt > 2:4717069/1‑149 (MQ=255) tAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCg < 1:2730127/149‑1 (MQ=255) agagagCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGt < 2:2082319/149‑1 (MQ=255) agagCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCa > 1:4469090/1‑149 (MQ=255) gagCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCAc > 1:4637251/1‑149 (MQ=255) ggAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGgcgc > 1:4304798/1‑149 (MQ=255) ggAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGGCACGGAAAGAGTAAATTAGCTCGTTATCGCGGGATTTCTCTTAGTCACCgcgc > 1:4799053/1‑149 (MQ=255) aaGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGgcgcgc < 2:2657744/149‑1 (MQ=255) aGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGca > 1:4224779/1‑149 (MQ=255) ggATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCg > 2:2301809/1‑149 (MQ=255) gATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGa > 2:2216153/1‑149 (MQ=255) aTGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCTCAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGaa < 2:427376/149‑1 (MQ=255) aTGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGaa < 1:1621421/149‑1 (MQ=255) aTGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGaa < 2:2468492/149‑1 (MQ=255) tGCTTTCGCATTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAg < 2:4099528/149‑1 (MQ=255) gCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAgg < 1:2301809/149‑1 (MQ=255) cTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAggc < 2:4385923/149‑1 (MQ=255) cTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAggc > 2:303085/1‑149 (MQ=255) gCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCAt > 2:4052956/1‑149 (MQ=255) ccTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATc < 1:5198047/149‑1 (MQ=255) ccTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAAATCGCTCTTTAGCGCGGGATTTCTCATCGTCACCGCGCGCACCACCGAAGGCGGCATc > 1:4974562/1‑149 (MQ=255) cTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCa > 1:2097701/1‑149 (MQ=255) ttttatAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTTATTTTTCGGATCAAATCGATGGAAACGGACACGGAAAGAAAAAAATCGCTCATTAGCGCGGGAATTATCTTCGTCACGGCGCGCACCACCGAAGGCCGcaacaa > 1:3466097/6‑149 (MQ=255) tttGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCaa > 2:652827/1‑149 (MQ=255) tGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCaaaa > 2:1708204/1‑149 (MQ=255) gTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTATCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAAc > 1:1909029/1‑149 (MQ=255) aTTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTa < 1:4403062/149‑1 (MQ=255) ttGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTAtt < 2:15263/149‑1 (MQ=255) cccGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGt < 1:4906598/149‑1 (MQ=255) ccGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGtt > 1:550902/1‑149 (MQ=255) gTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTAGGATACCAGCGATGGTAGCGGTCACGGAAAGAGTAAATTCGCTCTTTATCGCGGGGTTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCCTATTTGTTCa > 1:2178703/1‑149 (MQ=255) ttGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCCCCACCGAAGGCGGCATCAAAACCGTATTTGTTCAg > 1:4604181/1‑149 (MQ=255) aGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGcc < 2:1027563/149‑1 (MQ=255) gTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCt > 2:2845203/1‑149 (MQ=255) tgCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGttt < 2:828330/149‑1 (MQ=255) gCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTc > 2:3061039/1‑149 (MQ=255) cacaGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAg < 1:3139631/149‑1 (MQ=255) cacaGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAg < 2:3321964/149‑1 (MQ=255) acaGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCGGTTTCAgg > 2:4150600/1‑149 (MQ=255) gCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCt > 2:1999588/1‑149 (MQ=255) gCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCt < 1:2824885/149‑1 (MQ=255) tCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTc < 1:1647003/149‑1 (MQ=255) cGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAAATCGCTCATTAGCGCGGGATTTCTATTCGTCACGGCGCGCACCACCCAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCGGTTTCAGGCCGTCAg > 1:1135228/1‑149 (MQ=255) gggCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGt > 2:4509703/1‑149 (MQ=255) ggCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGtt < 2:1092731/149‑1 (MQ=255) gcgcTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGttt < 2:4771009/149‑1 (MQ=255) gcgcTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGttt < 1:3954715/149‑1 (MQ=255) gcTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTc < 2:4674606/149‑1 (MQ=255) gATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCata < 2:2821772/149‑1 (MQ=255) gATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCata < 1:2065726/149‑1 (MQ=255) tttCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAatat < 1:3191538/149‑1 (MQ=255) tCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCg < 1:829721/149‑1 (MQ=255) ggATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGt > 1:3271626/1‑149 (MQ=255) gATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTa > 1:630295/1‑149 (MQ=255) cccAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGt < 2:3776518/149‑1 (MQ=255) ccAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGtt < 2:3511873/149‑1 (MQ=255) ccAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGtt > 2:3978684/1‑149 (MQ=255) cAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGttt < 2:4885140/149‑1 (MQ=255) aGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTc > 2:1608251/1‑149 (MQ=255) aGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTc < 2:737321/149‑1 (MQ=255) gCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTcg > 1:2665360/1‑149 (MQ=255) aaGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGcc < 1:1017857/149‑1 (MQ=255) aGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCg > 2:880088/1‑149 (MQ=255) gCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGt > 1:1746151/1‑149 (MQ=255) gCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGt > 1:5121218/1‑149 (MQ=255) ggTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGc > 1:1160544/1‑149 (MQ=255) ggTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGc > 2:1829528/1‑149 (MQ=255) ggTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGc > 1:1246579/1‑149 (MQ=255) ggTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGc < 1:3133916/149‑1 (MQ=255) gTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCa > 2:3089588/1‑149 (MQ=255) tCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCAc > 2:1256710/1‑149 (MQ=255) cACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACg < 2:325281/149‑1 (MQ=255) cGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGaa < 2:122377/149‑1 (MQ=255) cGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTACCGTGCACGaa > 1:2042092/1‑149 (MQ=255) ggAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAAt < 2:550902/149‑1 (MQ=255) ggAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAAt > 2:726591/1‑149 (MQ=255) ggAAAGAGTAAAATCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAAt > 2:288085/1‑149 (MQ=255) gAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATg > 1:30647/1‑149 (MQ=255) aaaGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATgg < 2:4965166/149‑1 (MQ=255) aaGAGTAAATTCGCTCTTTAGCGCGGGATTTATCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGa < 1:4748496/149‑1 (MQ=255) gagTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGAtt < 1:2224562/149‑1 (MQ=255) gTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTaa < 1:666706/149‑1 (MQ=255) tAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAAt > 1:3040312/1‑149 (MQ=255) cGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCAt < 1:3652896/149‑1 (MQ=255) ctctTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCg > 2:5134707/1‑149 (MQ=255) tctTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGc < 2:2770115/149‑1 (MQ=255) ctTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGcc < 1:291423/149‑1 (MQ=255) tttAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCa < 1:4079118/149‑1 (MQ=255) tttAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCa > 2:14627/1‑149 (MQ=255) ttAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCAc > 1:1125328/1‑149 (MQ=255) gcgcGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGcc < 1:3858560/149‑1 (MQ=255) gcgcGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTATTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGcc < 2:2607037/149‑1 (MQ=255) cgGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGCCTTc < 1:2714233/149‑1 (MQ=255) gATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCAACAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTGCAGTTTTCAAAATATCGGTATGTTTCGCGCTGCCGTGCACGAAAGGATTAATCCCCATCGCCACGCCTTCCgg > 2:2035724/1‑149 (MQ=255) aTTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGCCTTCCggg > 1:3925196/1‑149 (MQ=255) aTTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGCCTTCCggg < 2:3447800/149‑1 (MQ=255) ttCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGCCTTCCGGGtt < 2:4786658/149‑1 (MQ=255) | TCCAGTTAGAGAGCGGGAAGACGCGGATGCTTTCGCCTTTGTTAATTTGCCCGTTGTAGTTGTGCCACAGCTCCGGGCGCTGATTTTTCGGATCCCAGCGATGGAAGCGGTCACGGAAAGAGTAAATTCGCTCTTTAGCGCGGGATTTCTCTTCGTCACGGCGCGCACCACCGAAGGCGGCATCAAAACCGTATTTGTTCAGCGCCTGTTTCAGGCCTTCAGTTTTCATAATATCGGTATGTTTCGCGCTGCCGTGCACGAATGGATTAATCCCCATCGCCACGCCTTCCGGGTTTT > CP009273/2869121‑2869417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |