| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,873,729 | G→T | 8.9% | V6V (GTC→GTA) | casE ← | CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,873,729 | 0 | G | T | 8.9% | 1214.5 / 65.3 | 320 | V6V (GTC→GTA) | casE | CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| Reads supporting (aligned to +/- strand): ref base G (173/118); new base T (22/7); total (195/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 336 total aligned reads displayed.
CTGCAATAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTATATATATCGCCGCCA > CP009273/2873582‑2873877 | cTGCAATAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAAtgatga > 2:4238984/1‑149 (MQ=255) tGCAATAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGAc > 1:957033/1‑149 (MQ=255) aaTAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACttt < 1:2453102/149‑1 (MQ=255) aTAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTa > 2:3033565/1‑149 (MQ=255) tAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTAc < 2:3182114/149‑1 (MQ=255) tGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCATGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATa < 2:780899/149‑1 (MQ=255) gACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTTGTAAAGATCCCTGCTCCAGTCCCTGGCAATGATGACTTTACTGAGATAc > 2:3680821/1‑149 (MQ=255) gACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATAc < 2:676996/149‑1 (MQ=255) gACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATAc > 1:709342/1‑149 (MQ=255) gACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATAc < 2:4724782/149‑1 (MQ=255) aCAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACa > 1:1577551/1‑149 (MQ=255) cAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACAt < 2:2289986/149‑1 (MQ=255) aGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATc < 2:727968/149‑1 (MQ=255) gCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATcc > 1:1786982/1‑149 (MQ=255) gCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATcc > 1:4724574/1‑149 (MQ=255) ttCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATa > 2:1387706/1‑149 (MQ=255) tCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATAc > 1:2304643/1‑149 (MQ=255) gtgtTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCtt < 1:1923224/149‑1 (MQ=255) gtgtTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCtt < 2:2062270/149‑1 (MQ=255) tttCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTaa < 1:2729384/149‑1 (MQ=255) cTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATcaca > 2:2870168/1‑149 (MQ=255) cTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATcaca > 1:1017358/1‑149 (MQ=255) ttCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTGCTGAGATACATCCATACCTCCTTTAATCACAt > 1:3926391/1‑149 (MQ=255) ttCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACAt < 2:2386865/149‑1 (MQ=255) tcAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATAcc > 1:4172611/1‑149 (MQ=255) cAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTTGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCa < 2:2628536/149‑1 (MQ=255) cAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCa < 1:2954288/149‑1 (MQ=255) cAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCa > 2:1434520/1‑149 (MQ=255) aaCATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCAt > 1:566360/1‑149 (MQ=255) cATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATtc < 2:4521878/149‑1 (MQ=255) cATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATtc < 2:2836511/149‑1 (MQ=255) aTGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATtct < 1:3721004/149‑1 (MQ=255) aaaaaGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCgg < 2:1087930/149‑1 (MQ=255) aaaaGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCggg > 2:2708442/1‑149 (MQ=255) aaaGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGa < 2:1589043/149‑1 (MQ=255) aaaaTCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCa > 2:4359326/1‑149 (MQ=255) aaTCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCaca > 2:294910/1‑147 (MQ=255) aaTCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCaaa > 1:893683/1‑149 (MQ=255) aTCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAAt < 2:2731516/149‑1 (MQ=255) aTCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAAt < 1:888637/149‑1 (MQ=255) aCGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGt < 1:3169458/149‑1 (MQ=255) cGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTc > 2:5044666/1‑149 (MQ=255) agcagcATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGa > 2:1148215/1‑149 (MQ=255) agcagcATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGa < 1:4684884/149‑1 (MQ=255) cagcaTCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAgg > 2:1675758/1‑149 (MQ=255) agcaTCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGc > 1:4928699/1‑149 (MQ=255) agcaTCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGc < 1:780865/149‑1 (MQ=255) gcaTCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCa < 1:1237512/149‑1 (MQ=255) aTCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAg < 1:3752879/149‑1 (MQ=255) tCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCACgg > 1:3645805/1‑149 (MQ=255) tCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAgg > 1:1192376/1‑149 (MQ=255) cGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGCAGCAAATTGTCGAGGCCCGGTg > 2:5106344/1‑149 (MQ=255) gTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGat < 1:3486770/149‑1 (MQ=255) gTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGat > 1:4620060/1‑149 (MQ=255) tCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGatc > 2:3812555/1‑149 (MQ=255) cTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTCATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGatca < 2:1373425/149‑1 (MQ=255) gTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGatcatc > 1:3313763/1‑149 (MQ=255) tGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGt < 2:4533483/149‑1 (MQ=255) gAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCACTGCTCAAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATAACATACCATTCTCGTGAAGCAAATTTTCGAGGCAAGGTGATCATCGGTtc > 1:2263016/1‑149 (MQ=255) aataaatGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTtcgt < 2:935779/149‑1 (MQ=255) aataaatGCCATAAGCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTtcgt < 2:4100069/149‑1 (MQ=255) atcaatGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTtcgtc < 2:583410/146‑1 (MQ=255) ataaatGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTtcgtc < 1:4714084/149‑1 (MQ=255) ataaatGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTtcgtc > 1:4118701/1‑149 (MQ=255) atGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTcgcgc > 1:2064096/1‑149 (MQ=255) tGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTcgcgcg > 2:25014/1‑149 (MQ=255) ccATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGcc > 1:4639690/1‑149 (MQ=255) aTAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATCCATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGt > 1:1860603/1‑149 (MQ=255) aTAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGt < 2:4339831/149‑1 (MQ=255) aTAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGt > 1:3690717/1‑149 (MQ=255) tAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTa > 2:3276315/1‑149 (MQ=255) tCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAAt > 2:1841609/1‑149 (MQ=255) cccTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAAtt < 1:3379944/149‑1 (MQ=255) gTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTaaa > 1:1142235/1‑149 (MQ=255) tGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAat > 2:3135558/1‑149 (MQ=255) tGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAat > 1:3595552/1‑149 (MQ=255) tGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAat > 1:4545207/1‑149 (MQ=255) aaGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCACTGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCACATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAatga > 1:282907/1‑149 (MQ=255) aaGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAatga > 2:3705433/1‑149 (MQ=255) aaGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAatga < 2:4640675/149‑1 (MQ=255) aGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAatgat < 2:3469590/149‑1 (MQ=255) aGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAatgat > 2:4883533/1‑149 (MQ=255) ttGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGc < 1:4832144/149‑1 (MQ=255) tGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGTCAAGGTGATCATCGGTTCGTCGCGCGCCGAAAATTTTAAATGATGcc > 1:1454051/1‑149 (MQ=255) gTAAAGATCCCTGCTCCAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCt > 1:116360/1‑149 (MQ=255) cccTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGa > 1:2656670/1‑149 (MQ=255) cccTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGa > 1:5107305/1‑149 (MQ=255) tGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTc > 1:2533479/1‑149 (MQ=255) ccAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCa > 1:4434941/1‑149 (MQ=255) cAGGCCCTGGCAATGATTACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCAc > 2:4696572/1‑149 (MQ=255) cAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCACGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCAc > 2:2280191/1‑149 (MQ=255) aGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACt > 1:3836835/1‑149 (MQ=255) ggCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACta < 2:1973936/149‑1 (MQ=255) ggCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACta > 1:4007995/1‑149 (MQ=255) ggCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACtatatata > 1:1538283/1‑149 (MQ=255) gCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTatatatat > 1:3571488/1‑149 (MQ=255) cAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTATATATATc < 1:2134883/149‑1 (MQ=255) tgaCTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTATATATATCgccgcc > 2:3867808/1‑149 (MQ=255) tgaCTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTATATATATCgccgcc > 2:1117594/1‑149 (MQ=255) gaCTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTATATATATCGCCGCCa > 1:4211917/1‑149 (MQ=255) | CTGCAATAAAACATGACAGCCTTCTGGTGTGTTTCGCTTCTCAACATGAAAAAGAAAATCACGAGCAGCATCCGGTCTGTTTGGAAATAAATGCCATAATCCCTGGTGAAGTTGGTAAAGATCCCTGCTCCAGGCCCTGGCAATGATGACTTTACTGAGATACATCCATACCTCCTTTAATCACATACCATTCTCGGGAAGCAAATTGTCGAGGCAAGGTGATCATCGGTTCGTCGCGCGCCGTAAATTTTAAATGATGCCCTGTAACTGATTCCTCACTATATATATCGCCGCCA > CP009273/2873582‑2873877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |