| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,035,672 | C→A | 8.9% | intergenic (+20/+176) | ygfZ → / ← yqfA | iron‑sulfur cluster repair protein, plumbagin resistance/hemolysin III family HylIII inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,035,672 | 0 | C | A | 8.9% | 1036.4 / 30.5 | 322 | intergenic (+20/+176) | ygfZ/yqfA | iron‑sulfur cluster repair protein, plumbagin resistance/hemolysin III family HylIII inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (176/108); new base A (5/33); total (181/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.84e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 326 total aligned reads displayed.
CTGGAAGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGT > CP009273/3035524‑3035820 | tGGAAGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCa > 2:1893984/1‑149 (MQ=255) tGGAAGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCa < 1:1930013/149‑1 (MQ=255) aaGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCAttt > 1:3446139/1‑149 (MQ=255) aaGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCAttt > 1:4213916/1‑149 (MQ=255) aTGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATc < 1:37540/149‑1 (MQ=255) aTGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATc < 1:2159833/149‑1 (MQ=255) ggTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGc < 2:5087973/149‑1 (MQ=255) gTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGcc > 2:671751/1‑149 (MQ=255) cAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTg > 1:4904554/1‑149 (MQ=255) aGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGa < 1:5205169/149‑1 (MQ=255) aGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGa < 1:3698984/149‑1 (MQ=255) tCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGc > 2:4823021/1‑149 (MQ=255) tCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGc < 1:4722695/149‑1 (MQ=255) gTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGa > 1:1342061/1‑149 (MQ=255) ttACTGGTCGTCATGAATAACGATTTGGACCCGGATAGCATCTTCCGCGTACGCGACGATGCGAATAAATTGCATATCGAGCCGCTGCCGTTTTCGCTCGAAGAGTAAATCTATTTATCGCATCAGGAATTTATCGCCTGATGCGACGc < 2:906684/148‑1 (MQ=255) tACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCCTTTATCGCCTGATGCGACGCt > 2:4207573/1‑149 (MQ=255) tACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGGATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCt > 2:344112/1‑149 (MQ=255) cAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTgg > 1:2598396/1‑149 (MQ=255) cAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTgg > 1:2555641/1‑149 (MQ=255) gtcgtcATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGgcgc > 1:781568/1‑149 (MQ=255) gtcgtcATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGgcgc > 2:1820996/1‑149 (MQ=255) tcgtcATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGcgcg > 2:343061/1‑149 (MQ=255) tcgtcATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGcgcg > 2:1596644/1‑149 (MQ=255) gtcATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGAATTTATCGCCTGATGCGACGCTGGCGCGTc < 2:3676839/149‑1 (MQ=255) tttaaTAACGATATGGAACGGGATAGCATCTTCCGCGTACGCGACGATGCGAATACTTGGAATATCGAGCCGCTGCCGTATTCGCTCTAAGATTAAATCTCTTTATCGCATCAGGCATTTATCGCCTTATGCGACGCTGGCGCGTCTTa < 2:3613974/146‑1 (MQ=255) tGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTAt > 2:2459842/1‑149 (MQ=255) tGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTAt > 1:3408694/1‑149 (MQ=255) tGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTAt > 1:2836364/1‑149 (MQ=255) aTAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCAt > 2:3007240/1‑149 (MQ=255) aTAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCAt > 2:466878/1‑149 (MQ=255) aaCGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCAGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCAGTTTTAGCCTGATGCGACGGTGTCTCGTCTTATGATGt > 1:1020796/1‑149 (MQ=255) gATATGGAACCGGATAGCATCTTCCGCGTACGCGACTTTGCTAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGATTAAATCTCTTTATCGCATCAGGCATTTATCGCCTTTTGCGACGCTGGCGCGTCTTATCATGTCTg < 2:4872978/149‑1 (MQ=255) gATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTg > 2:2486834/1‑149 (MQ=255) gATAGGCAACCGTATAGCATCTTCCGCGTACGCGACTATGCTAATACATTGAATATCGAGCCGCTGCGTTTTTCGCTCGAAGTGTAAATCTATTTATCGCAAAAGGAATTTATCCCCTGTTGCGACGCTGGCGCGTCTTATCATGTCTg < 2:2270054/149‑1 (MQ=255) tatGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTggg > 1:1825876/1‑149 (MQ=255) ggAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGAtt > 1:102862/1‑149 (MQ=255) aCCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGa > 1:4765146/1‑149 (MQ=255) aCCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGa > 1:4655222/1‑149 (MQ=255) aCCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGa > 1:308841/1‑149 (MQ=255) gATCGCATCTTCCGCTTACGCGACGATGCTAATACATGGAATATCGAGCCGCTGCCTTATTCGCTCGACGAGTAAATCTGTTTATCGCAACAGGCATTTATCGCATGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGcc < 2:1851747/149‑1 (MQ=255) gATAGCATCTTCCGCGTACGCGACGATGCTAATACATTGCATATCGAGCCGCTGCCGTATTCGCGCGAAGAGTAAATCTCTTTATCGCATCCGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGcc < 2:3345625/149‑1 (MQ=255) tAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATAAGGCAATTATCGCCTGATGCGACGCAGGCGCGTCTTATCATGTCTGGGAtgtgtagccgt > 1:4499877/1‑142 (MQ=255) gCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTa > 1:976789/1‑149 (MQ=255) tgctgccGCTTACGCTACGTTGCGAATACTTTGAATATGGCGCCGCTGCCTTTTTCGCACGACGATTAAATCTCTTTATCGCATCAGGATTTTATGGCCTTATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATc < 2:2206235/144‑1 (MQ=255) tCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATca > 1:1743204/1‑149 (MQ=255) tCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATca > 2:1618180/1‑149 (MQ=255) tCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATca > 2:4344251/1‑149 (MQ=255) ttCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATcaca < 2:387345/149‑1 (MQ=255) tCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCacaa > 2:2044567/1‑149 (MQ=255) gcgTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAg < 2:4719633/149‑1 (MQ=255) gcgTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGAATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAg > 2:3544910/1‑149 (MQ=255) ttACGCGCCGATGCTAATACTGTGCTTTTGGCGCCGCTGCCGTATTCGCTCTAAGATTAAATCTCTTTTCCGCATCTGGCTTTTATCGCTTGTTGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAggg < 1:3191760/148‑1 (MQ=255) gtccgcgACGTTGCTAATAATTTGCATATCGCGCCGGTGCTTTTTTCGATCTATTATAAAATCTATTTTTCGCACCTGGATTTTAGCGCCTGTTGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAggg < 1:3174364/146‑1 (MQ=255) gTACGCGACGTTGCGATTAATTTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGATTAAATCTATTTATCGCATCAGGCTTTTATCGCCTTATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAggg < 2:3988080/149‑1 (MQ=255) tACGCGACGTTGCTAATACTTTGAATATCGCGCCGCTGCCTTATTCGCTCGAATATTAAATCACTTTATCGAATCTGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGa < 2:27394/149‑1 (MQ=38) gcgACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGa > 1:2979134/1‑149 (MQ=255) cgacgaTGCTAATAATTTGCATATCGCGCCGCGGCGTTATTCGCTCGAAGTTTAAATCTCTTTATCGAATCTGGAATTTAGCGCCTGAGGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAg < 1:1624760/149‑1 (MQ=255) cgaagaTGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGATCGAAGATAAAATCACTTTATCGCATCAGGCATTTATCGCCTGTTGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAg < 2:156548/149‑1 (MQ=255) cgaTGCGAATACATTGCATATCGAGCCGCTGCCGTTTTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGAATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGcc < 2:2834165/149‑1 (MQ=255) aTGCGAATACATTGCATTTCGCGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCg < 2:1105231/149‑1 (MQ=255) aTGCGAATACATTGCATATCGAGCCGCGGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCg < 2:3688454/149‑1 (MQ=255) tGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGt > 2:758824/1‑149 (MQ=255) gCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTa < 2:2537642/149‑1 (MQ=255) aaTACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGAt > 1:736753/1‑149 (MQ=255) aaTACATTGCATATCGAGCCGCTGCCGTAATCGCTAGAAGAGTAAATATCTTTATCGCATCAGGCATTTATAGCCTTATGCGACGCTGGCGCGTCTTATAATGTATGGGATTTGTTTACTTTATAACAACAGGGACGAGGCCCGTAgtt > 1:1435220/1‑147 (MQ=255) tACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCg > 2:2908818/1‑149 (MQ=255) cATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGa > 1:4246828/1‑149 (MQ=255) atatCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGCGACGAGGCCCGTAGATCGGATAAGGc > 2:3361610/1‑149 (MQ=255) gAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGAATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGGCTGCGAAGTGATGCCCCTTACACCACACGGACGATGCCATTAAAACGGAGAAAGCGtaaa > 1:1228549/1‑146 (MQ=255) ccGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGc > 2:414835/1‑149 (MQ=255) gCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCg > 1:2873263/1‑149 (MQ=255) cTGCCTTTTTCGCTCGAAGAGTAAATCTCTTTATCGCATCTGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGa < 1:2854371/149‑1 (MQ=255) gCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAAt < 1:2063801/149‑1 (MQ=255) gCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAAt > 1:1660215/1‑149 (MQ=255) ccGTTTGCGCTCGAAGATTAAATCTCTTTATCGATTCTGGAATTTATCGCCTTTTGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATc < 1:545912/149‑1 (MQ=255) gTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCg > 1:1224108/1‑149 (MQ=255) gTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCg > 2:4958492/1‑149 (MQ=255) gTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCg > 1:618792/1‑149 (MQ=255) aTTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGc > 1:4294085/1‑149 (MQ=255) aTTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGc > 1:361512/1‑149 (MQ=255) ttCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCa > 1:4158301/1‑149 (MQ=255) gCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGtt > 2:4777430/1‑149 (MQ=255) gattAAATCTCTTTATCGCATCAGGAATTTATCGCTTGTTGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTcc < 1:5043209/146‑1 (MQ=255) gagTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTcc < 2:2752232/149‑1 (MQ=255) attAAATCTATTTATCGAATCAGGATTTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCg < 1:2486317/147‑1 (MQ=255) gTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCCGTGGTGCTCCGa > 2:3925864/1‑149 (MQ=255) tAAATCTCTTTATCGCAGCAGGAATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGAt < 1:710395/149‑1 (MQ=255) aaTCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGc > 2:3139593/1‑149 (MQ=255) ctctTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTg > 1:3119751/1‑149 (MQ=255) ctctTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTg > 2:4700554/1‑149 (MQ=255) tctTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGa > 1:3985599/1‑149 (MQ=255) tctTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGa > 1:923672/1‑149 (MQ=255) tCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGAc > 2:4554961/1‑149 (MQ=255) tCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGAc > 2:1421709/1‑149 (MQ=255) tCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGAc > 2:4019139/1‑149 (MQ=255) tCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTACACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGAc > 2:2820052/1‑149 (MQ=255) gCATCCGGATTTTCTCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGc < 1:4095872/149‑1 (MQ=255) aTCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTg > 2:1932711/1‑149 (MQ=255) ggCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGgcgc > 2:1046662/1‑149 (MQ=255) cATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGt < 2:2397243/149‑1 (MQ=255) | CTGGAAGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGT > CP009273/3035524‑3035820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |