| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,080,755 | T→G | 21.0% | F231V (TTC→GTC) | metK → | S‑adenosylmethionine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,080,755 | 0 | T | G | 21.0% | 503.7 / 70.9 | 296 | F231V (TTC→GTC) | metK | S‑adenosylmethionine synthetase |
| Reads supporting (aligned to +/- strand): ref base T (77/152); new base G (64/3); total (141/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 314 total aligned reads displayed.
CGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACG > CP009273/3080607‑3080903 | aTGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtttc < 2:3114881/149‑1 (MQ=255) aTGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtttc < 2:514272/149‑1 (MQ=255) gCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtttcgt < 2:2039042/149‑1 (MQ=255) cTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtttcgtt < 1:904840/149‑1 (MQ=255) tGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTa < 2:2439333/149‑1 (MQ=255) gagCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCgg > 2:3827464/3‑149 (MQ=255) gagCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCgg < 1:3907742/147‑1 (MQ=255) cTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTgg > 1:1583989/1‑149 (MQ=255) ttCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATCGGTgggc > 1:2004423/1‑147 (MQ=255) cACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCaa > 2:3370500/1‑149 (MQ=255) tCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATAGGTGG‑CCCAAAgg > 1:2328287/1‑149 (MQ=255) aCTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGAc < 2:1958166/149‑1 (MQ=255) ctctGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCAATGGGTGACt > 2:2276430/1‑149 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGTTATCGGTGG‑CCCCATGGGTGACAGCg > 1:1415069/1‑149 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCg < 1:2825313/149‑1 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCg < 1:2598103/149‑1 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGG‑CCCCAAGGGTGACAGCg > 1:4625049/1‑149 (MQ=255) tGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATCTGTGG‑CCCAATGGGTGACTGCg > 1:2182010/1‑149 (MQ=255) gAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCgg < 2:2892322/149‑1 (MQ=255) aaGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATCGGGGG‑GCCCAAGGGTGGcggcggg > 1:3063078/1‑148 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGATTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGGTTCGTTATCGGTGG‑CCCAATGGGTGACTGCggac < 2:2945055/149‑3 (MQ=255) gaTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGa > 2:2745482/1‑149 (MQ=255) cGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTg < 1:3627137/149‑1 (MQ=255) cGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTg < 1:3032656/149‑1 (MQ=255) gACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTgg > 2:3336482/1‑149 (MQ=255) aCCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGt < 1:4253805/149‑1 (MQ=255) aCCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGt > 2:589233/1‑149 (MQ=255) ccAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTc < 1:2078916/149‑1 (MQ=255) aGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGt < 2:922681/149‑1 (MQ=255) aaTCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCCAAGGGTGACTGCGGTCAGACTGGTCGGaaa > 1:1675677/1‑149 (MQ=255) ttCGCTGCAAGTAGAGGTAATGGAAGAGATAATCAAGCCAATTCTGACCTCTGTATTGCTGACTTCTGCATCCTAATTCTTCATCAACCCGACCGGTTGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGTCTGGTCGTataa < 2:1575595/148‑1 (MQ=255) aTCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTaaaa > 1:4179442/1‑149 (MQ=255) aTCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATCGGTGG‑GCCAAAGGGTGACTGCGGTCTGTCAGGTCGTaaaa > 1:782968/1‑149 (MQ=255) aTCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGGGG‑CCCCCTGGGGGACTGCGGTCTGACTGGTCGTgaaa > 1:3600548/1‑149 (MQ=255) tCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAAt < 2:711862/149‑1 (MQ=255) tCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCCAAGGGTGACTGCGGTCTGACTGGTCGTAAAAt > 1:3854355/1‑149 (MQ=255) cGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAAtt < 2:4001644/149‑1 (MQ=255) gCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTa < 1:4370215/149‑1 (MQ=255) cTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTAt < 1:2633171/149‑1 (MQ=255) cTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGGTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTAt < 2:4974998/149‑1 (MQ=255) tGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTGGTTATAGGGGG‑GCCAATGGGTGACTGCGGTCTGACTGGTCGTTAAAatata > 1:5051846/1‑148 (MQ=255) tGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATc < 1:1860484/149‑1 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATGGGTGG‑CCCAAAGGGTGACAGCGGTCTTACTGGTGGTAAAAATATAGtt > 1:95480/1‑149 (MQ=255) agaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTg < 1:4956203/149‑1 (MQ=255) aagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGAt < 2:4600565/149‑1 (MQ=255) aagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGAt < 1:1024828/149‑1 (MQ=255) cGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATAcc < 1:805441/149‑1 (MQ=255) ggTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCt < 2:1721889/149‑1 (MQ=255) tAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAc < 2:1558462/149‑1 (MQ=255) ggAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTTAAATTATCGTTGATACCTAcggcg > 2:2804907/1‑149 (MQ=255) gAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGG‑CCCAATGGGTTACTGCGGTCTGACTGGTCGGAAAATTATCGTTGATACCAAcggcgg > 2:479836/1‑149 (MQ=255) aaGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACggcggc > 2:3324850/1‑149 (MQ=255) aaGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTAGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACggcggc < 2:796527/149‑1 (MQ=255) agaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATg < 2:5071565/149‑1 (MQ=255) agaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCCGTGG‑CCCCAAGGGTGTCTGCGGTCTGACGGGTCGTAAAATTATCGTTGATAACTACGGCGGCCTg > 2:4449744/1‑149 (MQ=255) agaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGCTCGTGTAGTTATCCGAGG‑CCCCAAGGGTGACTGCGGTCAGACAGGTCGTAAAAATATCTATGATAACAACGGCGGCAtt > 2:4656666/1‑148 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATgg < 2:3856766/149‑1 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATgg < 2:566239/149‑1 (MQ=255) atcatcAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGgc < 1:4788689/149‑1 (MQ=255) atcatcAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGgc > 2:4532693/1‑149 (MQ=255) catcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATCGGTGG‑CCCCAAGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGATAACAACCGCGGCATGgcgc > 1:2922820/1‑149 (MQ=255) atcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATGGGTGG‑CCCAAATGGTTACTGCGGTCTGACGGGTCGTTAAATTATCGGTGATAACTAAGGCGGCATGGcgcg > 2:21549/1‑149 (MQ=255) tcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCCAAGGGTGTCTGCGGTCTGACTGGTCGTAAAATTATAGTTGATAACTACGGCGGCATGGCGCGt > 2:1426530/1‑149 (MQ=255) aaGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCa > 2:738985/1‑149 (MQ=255) aGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCAc < 1:1520164/149‑1 (MQ=255) gCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATCGGTGG‑GCCCAAGGGGGACTGCGGGATTTCTGGTGGGTAAAATATAGTTGATAAAAAAGGCGGCATGGGGCGTCCCg > 1:1372767/1‑149 (MQ=255) ccAATTCTGCCCGCTGAATGGCTGACTTCTGCCCCCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTTTCCGTGGCCCCAATGGGT‑AATGCGGTCTTACTTGTAGTAAAATTATCGTTTTTAACTAACGCGGCCTGGCGCGTCAccg > 2:1861651/1‑147 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGc < 1:4976369/149‑1 (MQ=255) ttCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTAGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGc > 1:1965113/1‑149 (MQ=255) tCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCg < 2:1473344/149‑1 (MQ=255) cGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCAt < 1:4522279/149‑1 (MQ=255) aaTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGGGG‑CCCAAGGGGTGACTGCGGTCTGACGGGTCGTAAAATTATCGTTGATACCTACGGCGGCAAGGCGCGTCACGGTGGCGGGGCATtctca > 2:2689621/1‑148 (MQ=255) aaTGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATAGGTGG‑CCCCAAGGGTGACTGCGGTCGGACTGGTCGTAAAAATATAGTTGTTAACAACCGCGGCATGGCGCGTCCCCGTGGCGGGGCATTctct > 1:4235124/1‑149 (MQ=255) gCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAAGGCGGCATTGCGCGTCACGGTGGCGGTGCATTCTCTGGTa > 2:2514073/1‑149 (MQ=255) gACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGTCTGCGGTCTGACTGGTCGTAAAATTATAGTTTATTCCTACGGCGGCCTGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAg > 2:4382266/1‑149 (MQ=255) gACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTAACGGTGG‑CCCAATGGGTGAAGGCGGGCTGACTGGTCGTAAAATTATCGTTGATACCAACGGCGGCAGTGCGCGGCACCGTGGCGGGGCAATCACAGGTaaat > 1:1273359/1‑148 (MQ=255) aCTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCCAAGGGTGACAGCGGTCTGACAGGTCGGAAAATTATAGTTGATACCAACCGCGGCAATGCGCGGCACCGGGGCCGTGCAATCTCAGGGaaata > 1:3352166/1‑147 (MQ=255) cTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCa < 1:3494645/149‑1 (MQ=255) tGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCAt < 1:2535192/149‑1 (MQ=255) gCCACCAAATTCTTCCTCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATc < 2:1183978/149‑1 (MQ=255) gCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACGGCGGTCTGACTGGTCGTAAAAATATCGGTTATAACAAAGGCGGCATGGCGCGGCACGGTGGCGGTGCATTATCTGGTAAATATCCAta > 2:2415420/1‑148 (MQ=255) accaAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACGGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCaaa > 2:4279550/1‑149 (MQ=255) accaAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGGTGG‑CCCAAATGGTGACTGCGGTCTGACTGGTCGTAAAAATATAGTTGATACCAAAGGCGGCAAGGCGCGTCACCGTGGCGGTGCATTCTCAGGTAAAGATAAATCaaa > 1:1192066/1‑149 (MQ=255) accaAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAATATACATCaaa > 2:1645354/1‑149 (MQ=255) aaTTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTg < 1:5150335/149‑1 (MQ=255) aaTTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTg < 1:1384452/149‑1 (MQ=255) aaTTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCGGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCCCGGTGGCGGGGCATTCTCTGGTAAAGATCCAAAAAAAGTg > 2:2070394/1‑149 (MQ=255) ttcttcATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGa < 1:4263626/149‑1 (MQ=255) tcttcATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGAc < 1:1801944/149‑1 (MQ=255) tcttcATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGAc < 2:3002764/149‑1 (MQ=255) tcttcATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGAc < 1:2510115/149‑1 (MQ=255) catcaACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGtt < 1:856283/149‑1 (MQ=255) catcaACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCGGACGGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGGGGACCggt > 2:3263720/1‑147 (MQ=255) atcaACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTc < 2:4179442/149‑1 (MQ=255) atcaACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTc < 2:2701165/149‑1 (MQ=255) aaCCCGACCGGTCGTTTAGTTATAGGTGG‑CCCAAAGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGATAACAACGGCGGCATGGCGCGTCACGGTGGCGGTGCCTTCTCTGGTAAACAAACATCAAAATTGGACCGTTcccc > 2:3603879/1‑147 (MQ=255) aCCCGACCGGTCGTTTAGGTATCGGGGG‑CCCACAGGGTGACAGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAAGGCGGCATGGCGCGGCACGGTGGCGGTGCAATCTCTGGTAAAGATACATCAAAAGTGGACCGTTCCGCa > 2:3094819/1‑149 (MQ=255) cccGACCGGTCGTGTCGATATCGGTGG‑CCCAAATGGTGAATGCGGTCAGAATGGTCGTAAAAATATAGTTTATACCTACGGCGGCATGGCGCGTCACGGTGGAGGTGCATTATCTTTTAAACATCCAAAAAAAAAGGACCGTTCCCCac > 2:106306/1‑148 (MQ=255) aCCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTa < 1:1257635/149‑1 (MQ=255) tttcgttATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCAc > 2:875988/1‑149 (MQ=255) | CGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGG‑CCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACG > CP009273/3080607‑3080903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |