| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,110,066 | A→C | 5.6% | V802V (GTT→GTG) | yghJ ← | DUF4092 family putative lipoprotein peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,110,066 | 0 | A | C | 5.6% | 1183.2 / 48.9 | 339 | V802V (GTT→GTG) | yghJ | DUF4092 family putative lipoprotein peptidase |
| Reads supporting (aligned to +/- strand): ref base A (192/128); new base C (10/9); total (202/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 345 total aligned reads displayed.
CAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTG > CP009273/3109918‑3110214 | gCCTTCAGAGAATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAAc > 2:798000/1‑149 (MQ=255) gCCTTCAGAGAATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAAc < 1:4073048/149‑1 (MQ=255) ttCAGAGAATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTc > 2:1465417/1‑149 (MQ=255) gagaATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCt > 1:5203139/1‑149 (MQ=255) gagaATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCt < 2:3941730/149‑1 (MQ=255) aTCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCt < 2:2612436/149‑1 (MQ=255) tCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCtt < 2:1734861/149‑1 (MQ=255) tCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTGTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTGACCGTCCCCTGTCtt < 2:325842/149‑1 (MQ=255) ctctGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTAc > 2:547252/1‑149 (MQ=255) ctctGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTAc < 1:4792564/149‑1 (MQ=255) tctGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACt < 2:3856595/149‑1 (MQ=255) tctGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACt < 1:4465633/149‑1 (MQ=255) tGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTAt > 1:595642/1‑149 (MQ=255) tGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTAt > 2:1105900/1‑149 (MQ=255) gTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATc > 2:5122395/1‑149 (MQ=255) gTTCTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATc < 2:2013609/149‑1 (MQ=255) ttttATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCg > 1:2093920/1‑149 (MQ=255) ttATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGAt > 1:739195/1‑149 (MQ=255) aTGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATgg > 2:4061187/1‑149 (MQ=255) aTCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGgtgt > 2:5067108/1‑149 (MQ=255) aTCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGgtgt > 1:3776641/1‑149 (MQ=255) aTCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGgtgt > 2:2465532/1‑149 (MQ=255) cGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTAc > 1:1380742/1‑149 (MQ=255) cTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCa > 2:2361836/1‑149 (MQ=255) tcatcaATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAg < 1:2812798/149‑1 (MQ=255) atcaATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATCGATGGTGTACGGCAgcg > 1:5039863/1‑149 (MQ=255) tcaATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAgcgc > 2:248240/1‑149 (MQ=255) aaTAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCAc < 1:1001897/149‑1 (MQ=255) ggCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTa > 2:4290507/1‑149 (MQ=255) aTAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACgg > 2:1154138/1‑149 (MQ=255) aTAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACgg > 2:3749779/1‑149 (MQ=255) tAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGc > 1:1757427/1‑149 (MQ=255) aaCGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCa < 2:1004196/149‑1 (MQ=255) aCGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAg > 1:3933888/1‑149 (MQ=255) aCGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAg > 1:2472141/1‑149 (MQ=255) gTTTCCTGTTTGCAATCTACATATTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTAAATGTTATTTCCACTTAACTTCCACTGTATTACTATCTATGGTGTAAGGCAGCGCACCATCTACGGCAGGATa > 2:1604013/1‑149 (MQ=255) tttCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATaa > 1:361281/1‑149 (MQ=255) tttCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATaa > 1:4289379/1‑149 (MQ=255) tttCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATaa > 1:2963555/1‑149 (MQ=255) tttCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATaa < 1:4868840/149‑1 (MQ=255) ttCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAAc < 1:3370454/149‑1 (MQ=255) ccTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGt > 2:1429146/1‑149 (MQ=255) gTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCa > 1:347569/1‑149 (MQ=255) ttGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATa > 1:1012006/1‑149 (MQ=255) gCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGa < 2:2898555/149‑1 (MQ=255) tCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCa > 1:300651/1‑149 (MQ=255) tACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCaaa < 2:1956289/149‑1 (MQ=255) aCATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAAt > 2:4937303/1‑149 (MQ=255) cATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATg < 1:2702338/149‑1 (MQ=255) cATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATg < 1:227802/149‑1 (MQ=255) tCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATaa > 2:3501736/1‑129 (MQ=255) cTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGccc < 1:425856/149‑1 (MQ=255) tCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGt > 1:2661280/1‑149 (MQ=255) agccagcTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTgc < 2:4207666/149‑1 (MQ=255) gccagcTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTgcg > 2:3630502/1‑149 (MQ=255) agcTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTgcgcgc < 1:1079488/149‑1 (MQ=255) ggCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCgctgct > 2:1797532/1‑149 (MQ=255) aaCTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATGTCCACTTACCTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGAc < 2:4446975/149‑1 (MQ=255) aCTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACg > 1:512172/1‑149 (MQ=255) tCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACGTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAAc < 2:314004/149‑1 (MQ=255) ccAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAAcg < 1:4373669/149‑1 (MQ=255) cTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGt < 2:73317/149‑1 (MQ=255) cTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGt < 2:904868/149‑1 (MQ=255) ttCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGtt > 1:3155748/1‑149 (MQ=255) tCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTc < 1:1177497/149‑1 (MQ=255) tCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTc < 1:4154660/149‑1 (MQ=255) ggTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCgg < 1:4745145/149‑1 (MQ=255) ggTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCgg > 2:3701742/1‑149 (MQ=255) ggTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCgg > 1:2525812/1‑149 (MQ=255) gTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGa > 2:631486/1‑149 (MQ=255) catcaGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCt < 1:2889758/149‑1 (MQ=255) catcaGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCt > 2:3651008/1‑149 (MQ=255) atcaGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCGGCTGACGAACGCGGTTCGGATACCCtt < 2:1921271/149‑1 (MQ=255) tcaGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTg > 2:2969472/1‑149 (MQ=255) caGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGc > 1:1906320/1‑149 (MQ=255) aGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCg > 1:1526212/1‑149 (MQ=255) ggTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCgg > 2:627288/1‑149 (MQ=255) ggTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCgg > 1:1257262/1‑149 (MQ=255) tgtttTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCg > 1:2612383/1‑149 (MQ=255) gtttTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGTTACCCTTGCGGATCGt < 2:1685582/149‑1 (MQ=255) ttttCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGtt < 1:550712/149‑1 (MQ=255) tttCTACCTGATATTTCCACTTCACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTa < 1:1700210/149‑1 (MQ=255) ttCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTAt < 1:2213605/149‑1 (MQ=255) ttCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTAt < 1:798000/149‑1 (MQ=255) ttCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTAt < 2:2174169/149‑1 (MQ=255) aCCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTtac < 1:201766/149‑1 (MQ=255) aCCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTtac > 2:2253412/1‑149 (MQ=255) ccTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTtact < 2:3951224/149‑1 (MQ=255) ccTGATATTTCCACTTAACGTCCCCTGTCGTACTATCGATGGGGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTtact < 1:3694081/149‑1 (MQ=255) tGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGTCAGAGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTtactac > 2:2678488/1‑149 (MQ=255) tatTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGa > 1:3829686/1‑149 (MQ=255) atTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGAc < 2:3156434/149‑1 (MQ=255) atTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGAc > 1:843874/1‑149 (MQ=255) tttCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACt > 1:2571320/1‑149 (MQ=255) tttCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCACTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACt > 2:4839395/1‑149 (MQ=255) ttCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCCGATCGTTATTTACTACCGACtt > 2:3432289/1‑149 (MQ=255) ccACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGt > 2:5020109/1‑149 (MQ=255) ccACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGt < 2:92715/149‑1 (MQ=255) aCTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTc > 2:2761641/1‑149 (MQ=255) cTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCa > 2:4735259/1‑149 (MQ=255) | CAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCTCATCAATAAAGGCATAACGCGTTTCCTGTTTGCCATCTACATCTTCCAGCCAGCTGGCAACTTCCAGCTTCGGTTTGTCATCAGGTTTGTTTTCTACCTGATATTTCCACTTAACTTCCCCTGTCTTACTATCGATGGTGTACGGCAGCGCACCATCTACGGCAGGATAACGTTCATAGACCCAAATGCCCGTTGCGCGCTGCTGACGAACGCGGTTCGGATACCCTTGCGGATCGTTATTTACTACCGACTTGTTCAGTG > CP009273/3109918‑3110214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |