| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,196,371 | G→T | 7.0% | P374P (CCG→CCT) | cca → | fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,196,371 | 0 | G | T | 7.0% | 1377.4 / 56.3 | 357 | P374P (CCG→CCT) | cca | fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (158/174); new base T (10/15); total (168/189) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 366 total aligned reads displayed.
CCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAA > CP009273/3196223‑3196519 | tCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACa > 2:1355406/1‑149 (MQ=255) gATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACaaa > 1:1907492/1‑149 (MQ=255) aTGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACaaaa > 2:3013584/1‑149 (MQ=255) tGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAg > 1:1417162/1‑149 (MQ=255) gCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCTACAAAAGc > 2:915220/1‑149 (MQ=255) tGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCcgt < 1:817691/149‑1 (MQ=255) tGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCcgt < 2:4748258/149‑1 (MQ=255) ggCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCcgtc > 2:445765/1‑149 (MQ=255) cGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCcgtcgt < 2:1055593/149‑1 (MQ=255) gTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGtt < 1:612377/149‑1 (MQ=255) aaCCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGaa > 2:749573/1‑149 (MQ=255) aaCCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGaa > 2:2651814/1‑149 (MQ=255) aCCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAg > 2:1566415/1‑149 (MQ=255) aCCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAg > 2:4994302/1‑149 (MQ=255) ccGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGc > 1:1453070/1‑149 (MQ=255) ccGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGc < 1:5059325/149‑1 (MQ=255) ccGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGc < 1:2592604/149‑1 (MQ=255) ccGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGc < 1:3346840/149‑1 (MQ=255) gCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCgg < 1:2553156/149‑1 (MQ=255) aGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGa < 2:1181213/149‑1 (MQ=255) cGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGAtt < 1:2967334/149‑1 (MQ=255) tCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTaaa < 1:1106700/149‑1 (MQ=255) gCAACTGGCGATGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTAACCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGgtg > 1:118635/1‑149 (MQ=255) aaCTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGtgtg < 1:5125447/149‑1 (MQ=255) aCTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTgg > 1:4055777/1‑149 (MQ=255) tGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGgag > 2:507702/1‑149 (MQ=255) ggCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGgaga < 2:4595231/149‑1 (MQ=255) cgcTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGAtt < 2:292340/149‑1 (MQ=255) cgcTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGAtt < 1:3974596/149‑1 (MQ=255) gcTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTc < 1:1325220/149‑1 (MQ=255) gcTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTc < 1:3489863/149‑1 (MQ=255) aGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCgagga < 1:3582912/149‑1 (MQ=255) aGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCgagga > 1:4147022/1‑149 (MQ=255) gCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCgaggag > 1:389600/1‑149 (MQ=255) gCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCgaggag > 1:2492108/1‑149 (MQ=255) gAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCt < 1:3098937/149‑1 (MQ=255) aGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTg > 2:307603/1‑149 (MQ=255) ggCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGa > 2:1147759/1‑149 (MQ=255) gcgGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGAcggcgg < 2:2715769/149‑1 (MQ=255) cgGCAGAACCGGTTGTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGa < 1:4661923/149‑1 (MQ=255) ggCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGAt > 1:2004094/1‑149 (MQ=255) cAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTg < 1:434735/149‑1 (MQ=255) aGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCAGCTGGTTGCGAGAAGCCTGGGAAGTGGCGCAGTAAGTGCCGACAAAAGCATTCGTTGAAGCGTGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGTACCGACGTCGGATTgc < 2:1703538/149‑1 (MQ=255) gAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTgcg > 1:1834640/1‑149 (MQ=255) ggTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGt < 1:987142/149‑1 (MQ=255) gTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCTACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTa > 1:3945414/1‑149 (MQ=255) gTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTa < 2:3861370/149‑1 (MQ=255) gTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTa > 1:2157438/1‑149 (MQ=255) gTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTa > 2:551737/1‑149 (MQ=255) tGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCa < 2:2951547/149‑1 (MQ=255) aaTCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGc > 1:1975541/1‑149 (MQ=255) aTCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCt < 1:2139159/149‑1 (MQ=255) gCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTggaa < 2:2494647/149‑1 (MQ=255) gCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTggaa < 2:1345395/149‑1 (MQ=255) gACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTCGCCAGCTggaagga > 2:524304/1‑149 (MQ=255) aCCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGaacaa > 1:625721/1‑149 (MQ=255) ccGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACg < 2:4782611/149‑1 (MQ=255) gCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAATGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGACCAACGtt > 2:2014135/1‑149 (MQ=255) gCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGtt < 2:4953145/149‑1 (MQ=255) gCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGtt < 2:2357292/149‑1 (MQ=255) cAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTg > 1:1526090/1‑149 (MQ=255) gCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCa < 1:4886213/149‑1 (MQ=255) gCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAg < 1:3410725/149‑1 (MQ=255) tGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGcc > 2:364025/1‑149 (MQ=255) cgcgAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATg < 2:1495091/149‑1 (MQ=255) gcgAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGTGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGa < 2:2361354/149‑1 (MQ=255) gcgAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGa < 2:3787170/149‑1 (MQ=255) gAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGt < 2:2300095/149‑1 (MQ=255) aGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTTACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATTAGTAt > 1:4983575/1‑149 (MQ=255) aGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTAt < 1:84785/149‑1 (MQ=255) aGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTAt < 1:326394/149‑1 (MQ=255) cTGGGAAGTGGCGCAGTCAGTGCCTACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTgg < 1:3060656/149‑1 (MQ=255) cTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTgg < 1:3550840/149‑1 (MQ=255) cTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTgg < 1:1768912/149‑1 (MQ=255) cTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGCTGCCCAAAGCCTGAATGAGTATTgg < 2:1952665/149‑1 (MQ=255) gggAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGc > 2:87009/1‑149 (MQ=255) ggAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCa > 2:561225/1‑149 (MQ=255) ggAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCa > 1:5035632/1‑149 (MQ=255) gAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAt < 2:4694504/149‑1 (MQ=255) aaGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAtt > 1:4087314/1‑149 (MQ=255) aGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAttt < 2:2994516/149‑1 (MQ=255) aGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAttt > 1:1684973/1‑149 (MQ=255) ggCGCAGTCAGTGCCTACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc < 1:3616531/149‑1 (MQ=255) gcgcAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGcc > 2:2868702/1‑149 (MQ=255) cagtcagtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGa < 2:1115173/149‑1 (MQ=255) gtcagtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATg > 1:2294059/1‑149 (MQ=255) tcagtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgc > 2:3733130/1‑149 (MQ=255) tcagtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGAGTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgc < 2:4183222/149‑1 (MQ=255) cagtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcg < 2:2050266/149‑1 (MQ=255) cagtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcg < 2:1853280/149‑1 (MQ=255) agtGCCTACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg > 1:4576034/1‑149 (MQ=255) agtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg < 1:2949509/149‑1 (MQ=255) gtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggc > 1:1025910/1‑149 (MQ=255) gtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggc > 2:3951768/1‑149 (MQ=255) gtGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggc > 2:292715/1‑149 (MQ=255) tGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggcg < 1:3757494/149‑1 (MQ=255) gCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGt > 2:3368626/1‑149 (MQ=255) ccGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCAGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGGTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTa > 2:1420401/1‑149 (MQ=255) gACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTaaa < 1:2413770/149‑1 (MQ=255) gACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTaaa < 1:4766341/149‑1 (MQ=255) | CCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAA > CP009273/3196223‑3196519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |