Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,316,300 C→A 6.8% R377L (CGT→CTT)  glmM ← phosphoglucosamine mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,316,3000CA 6.8% 1076.2 / 42.6 279R377L (CGT→CTT) glmMphosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base C (118/142);  new base A (11/8);  total (129/150)
Fisher's exact test for biased strand distribution p-value = 3.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

Only 100 of 299 total aligned reads displayed.

TTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACC  >  CP009273/3316152‑3316448
                                                                                                                                                    |                                                                                                                                                    
ttCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAac                                                                                                                                                      >  1:2386360/1‑149 (MQ=255)
     cTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAacgtacg                                                                                                                                                 >  1:545536/1‑149 (MQ=255)
       tCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGtt                                                                                                                                               <  1:200655/149‑1 (MQ=255)
         caccaTCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTaa                                                                                                                                             <  2:1020892/149‑1 (MQ=255)
          accaTCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAAc                                                                                                                                            <  1:3201537/149‑1 (MQ=255)
          accaTCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAAc                                                                                                                                            <  1:2415679/149‑1 (MQ=255)
          accaTCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAAc                                                                                                                                            <  1:4112838/149‑1 (MQ=255)
            caTCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCa                                                                                                                                          <  2:4688484/149‑1 (MQ=255)
            caTCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCa                                                                                                                                          >  1:3812930/1‑149 (MQ=255)
                aCGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAAt                                                                                                                                      >  2:1785504/1‑149 (MQ=255)
                 cgcgAATTAGCGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATc                                                                                                                                     >  2:410339/1‑149 (MQ=255)
                 cgcgAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATc                                                                                                                                     <  2:3032209/149‑1 (MQ=255)
                  gcgAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCt                                                                                                                                    <  2:1697179/149‑1 (MQ=255)
                   cgAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTg                                                                                                                                   <  1:3297697/149‑1 (MQ=255)
                    gAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGc                                                                                                                                  <  2:2737275/149‑1 (MQ=255)
                          aCGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAAc                                                                                                                            <  1:4815311/149‑1 (MQ=255)
                              ttCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACAttt                                                                                                                        >  1:3414782/1‑149 (MQ=255)
                               tCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACAtttt                                                                                                                       <  1:1153147/149‑1 (MQ=255)
                                 ggTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCa                                                                                                                     <  1:3058376/149‑1 (MQ=255)
                                 ggTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCa                                                                                                                     <  1:722409/149‑1 (MQ=255)
                                  gTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCAt                                                                                                                    <  2:1216965/149‑1 (MQ=255)
                                       ggATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGc                                                                                                               <  2:545536/149‑1 (MQ=255)
                                        gATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCt                                                                                                              <  2:4741647/149‑1 (MQ=255)
                                        gATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCt                                                                                                              >  1:568863/1‑149 (MQ=255)
                                         aTTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCCCGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTg                                                                                                             >  2:2068002/1‑149 (MQ=255)
                                         aTTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTg                                                                                                             >  1:623531/1‑149 (MQ=255)
                                          tttACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGc                                                                                                            >  2:1951931/1‑149 (MQ=255)
                                             aCGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCaaa                                                                                                         >  1:394222/1‑149 (MQ=255)
                                             aCGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCaaa                                                                                                         <  1:4988135/149‑1 (MQ=255)
                                               gcagcaACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAgg                                                                                                       >  2:2231302/1‑149 (MQ=255)
                                               gcagcaACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAgg                                                                                                       <  2:4678637/149‑1 (MQ=255)
                                                cagcaACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGt                                                                                                      <  2:4099881/149‑1 (MQ=255)
                                                cagcaACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGt                                                                                                      <  1:2805958/149‑1 (MQ=255)
                                                  gcaACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCg                                                                                                    >  2:4539858/1‑149 (MQ=255)
                                                  gcaACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCg                                                                                                    >  2:1526414/1‑149 (MQ=255)
                                                    aaCACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTg                                                                                                  >  1:4567145/1‑149 (MQ=255)
                                                         gcgTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGc                                                                                             <  2:3106947/149‑1 (MQ=255)
                                                          cgTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCt                                                                                            <  2:4962188/149‑1 (MQ=255)
                                                           gTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTc                                                                                           >  1:2074412/1‑149 (MQ=255)
                                                            tCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCa                                                                                          <  1:3564697/149‑1 (MQ=255)
                                                            tCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCa                                                                                          <  2:2597704/149‑1 (MQ=255)
                                                               aCGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCatat                                                                                       >  1:1736507/1‑149 (MQ=255)
                                                                  gTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGt                                                                                    >  2:706633/1‑149 (MQ=255)
                                                                  gTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGt                                                                                    >  2:2455215/1‑149 (MQ=255)
                                                                  gTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGt                                                                                    >  2:4308846/1‑149 (MQ=255)
                                                                   ttGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGtt                                                                                   <  2:4084755/149‑1 (MQ=255)
                                                                    tGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTa                                                                                  <  1:1581494/149‑1 (MQ=255)
                                                                          gcgcAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGcc                                                                            >  2:3165891/1‑149 (MQ=255)
                                                                          gcgcAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGcc                                                                            >  1:2916519/1‑149 (MQ=255)
                                                                            gcAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCAt                                                                          <  2:3226120/149‑1 (MQ=255)
                                                                              aGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATcg                                                                        >  1:3653976/1‑149 (MQ=255)
                                                                                 ttCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATcgccg                                                                     >  1:2161259/1‑149 (MQ=255)
                                                                                 ttCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATcgccg                                                                     >  2:4794596/1‑149 (MQ=255)
                                                                                  tCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATcgccgc                                                                    <  2:3414787/149‑1 (MQ=255)
                                                                                  tCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATcgccgc                                                                    <  1:330292/149‑1 (MQ=255)
                                                                                     aCCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAg                                                                 >  1:1562008/1‑149 (MQ=255)
                                                                                         ctGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCAcc                                                             <  1:5158265/149‑1 (MQ=255)
                                                                                          tGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCt                                                            >  1:3198128/1‑149 (MQ=255)
                                                                                             ggTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCa                                                         >  1:4405157/1‑149 (MQ=255)
                                                                                             ggTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCa                                                         >  1:2313704/1‑149 (MQ=255)
                                                                                             ggTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCAACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATATTCATGCCGCTCCAAAGGTCTAGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCa                                                         >  1:4915857/1‑149 (MQ=255)
                                                                                              gTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCaa                                                        <  2:4153237/149‑1 (MQ=255)
                                                                                              gTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCaa                                                        <  2:759285/149‑1 (MQ=255)
                                                                                               tCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAg                                                       >  1:3387698/1‑149 (MQ=255)
                                                                                               tCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAg                                                       >  2:3799831/1‑149 (MQ=255)
                                                                                                cACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGc                                                      >  2:1871422/1‑149 (MQ=255)
                                                                                                cACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGc                                                      >  1:4314016/1‑149 (MQ=255)
                                                                                                  cGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCa                                                    <  2:577348/149‑1 (MQ=255)
                                                                                                  cGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCa                                                    <  1:3378595/149‑1 (MQ=255)
                                                                                                   ggCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAg                                                   >  2:2379795/1‑149 (MQ=255)
                                                                                                    gCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGc                                                  <  2:267689/149‑1 (MQ=255)
                                                                                                    gCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGc                                                  >  2:137296/1‑149 (MQ=255)
                                                                                                         aaCTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGa                                             <  2:16491/149‑1 (MQ=255)
                                                                                                             gACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGcc                                         <  2:4955399/149‑1 (MQ=255)
                                                                                                              aCTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCg                                        >  1:1870003/1‑149 (MQ=255)
                                                                                                               cTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGt                                       <  1:931812/149‑1 (MQ=255)
                                                                                                                  aTGCTCAAGTGGATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCAc                                    >  2:4487834/1‑149 (MQ=255)
                                                                                                                    gCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCg                                  <  1:4876630/149‑1 (MQ=255)
                                                                                                                       cAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGgta                               <  2:3632127/149‑1 (MQ=255)
                                                                                                                          gTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGgtagta                            >  2:1111728/1‑149 (MQ=255)
                                                                                                                           tGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGtagtag                           <  2:1939230/149‑1 (MQ=255)
                                                                                                                           tGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGtagtag                           <  2:814881/149‑1 (MQ=255)
                                                                                                                            ggATCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTagtagt                          <  2:2854667/149‑1 (MQ=255)
                                                                                                                              aTCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGttt                        <  2:4464198/149‑1 (MQ=255)
                                                                                                                              aTCGCCGCTACCTGCGGTGTAAAGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGttt                        >  1:1436032/1‑149 (MQ=255)
                                                                                                                               tCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGtttt                       <  2:3964419/149‑1 (MQ=255)
                                                                                                                                cgccgcTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTa                      <  2:1974793/149‑1 (MQ=255)
                                                                                                                                      tACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCcagc                <  2:3385284/149‑1 (MQ=255)
                                                                                                                                      tACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCcagc                >  1:1048302/1‑149 (MQ=255)
                                                                                                                                      tACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCcagc                >  1:3081442/1‑149 (MQ=255)
                                                                                                                                        ccTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCcagcag              <  2:3495407/149‑1 (MQ=255)
                                                                                                                                        ccTGCGGTGTAACGTACGTGAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCcagcag              <  2:1848705/149‑1 (MQ=255)
                                                                                                                                         cTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAgg             >  2:4659321/1‑149 (MQ=255)
                                                                                                                                         cTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAgg             >  1:1901046/1‑149 (MQ=255)
                                                                                                                                           gCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGAt           >  1:4469263/1‑149 (MQ=255)
                                                                                                                                               tgtAACGTACGTTAACCAGAATCTGCGGGGACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTCGTTTTATCCAGCAGGATcaca       >  1:1320998/1‑149 (MQ=255)
                                                                                                                                               tgtAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATcaca       >  1:1377769/1‑149 (MQ=255)
                                                                                                                                                 tAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATg     >  2:4355663/1‑149 (MQ=255)
                                                                                                                                                   acgtacgtTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGAc   <  1:4539875/149‑1 (MQ=255)
                                                                                                                                                    cgtacgtTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGAcc  <  1:1616681/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TTCGCCTTCCACCATCACGCGAATTAACGGTTCGGTGCCGGATTTACGCAGCAACACGCGTCCACGGTTGCCCAGCGCAGCTTCAACCTCTGCGGTCACGGCTTTAACTGACTCATGCTCAAGTGGATCGCCGCTACCTGCGGTGTAACGTACGTTAACCAGAATCTGCGGGAACATTTTCATGCCGCTGCAAAGGTCGTGCAGGCTCATATGGTTACGTGCCATCGCCGCCAGCACCTGCAAGCCAGCAACGATGCCGTCACCGGTAGTAGTTTTATCCAGCAGGATCACATGACC  >  CP009273/3316152‑3316448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: