| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,498,214 | T→G | 8.7% | intergenic (+72/+80) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,498,214 | 0 | T | G | 8.7% | 289.6 / 5.3 | 149 | intergenic (+72/+80) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (30/102); new base G (5/12); total (35/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 155 total aligned reads displayed.
ACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAA > CP009273/3498066‑3498361 | aCAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑Gt < 1:3602567/149‑1 (MQ=255)aCAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑Gt < 1:2720700/149‑1 (MQ=255) cAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑Gtg > 2:1788970/1‑148 (MQ=255) aaCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTca > 2:2896298/1‑148 (MQ=255) cGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCt < 2:5185569/149‑1 (MQ=255) ggTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTc < 2:1354224/149‑1 (MQ=255) gTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCa < 1:3365281/149‑1 (MQ=255) aCGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑t < 2:305772/149‑1 (MQ=255) aCGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑t < 2:4759684/149‑1 (MQ=255) aCGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTACGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACAC‑t < 1:1172100/149‑1 (MQ=255) aCGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTAATGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑t < 2:305800/149‑1 (MQ=255) gTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTGGCCCGCACCC‑aaa > 1:789534/1‑149 (MQ=255) ctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAAcc < 1:1233042/149‑1 (MQ=255) taataaCTATTCTGCCTCTCCAATCGAATCACATTAACTATTTATTATAAATGACATTAACCGTAGGACTTATAAGATGCGACTGCATCGAATCCGGCGATGCTGGCGCGTTTTATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAAccc < 1:1748357/145‑1 (MQ=255) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTTCCCGCAACC‑AAAcccccaaccc > 1:2154630/1‑142 (MQ=38) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCACACCC‑CAACCCACAcccc > 2:825585/1‑149 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTGCCCCACAACC‑CAAACCACAccccc > 2:3618447/1‑148 (MQ=38) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCaaa < 2:1256534/149‑1 (MQ=255) ctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAg < 2:4442209/149‑1 (MQ=255) ctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTGGCCCCCCCCC‑AAAACCACACCCCcaaa > 2:2341932/1‑148 (MQ=38) gCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑AAACCCACTCCCCAAAagg > 2:1161276/1‑149 (MQ=255) cgacAATCGCATCACATTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGa < 1:3058725/146‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAgg < 2:1187254/149‑1 (MQ=255) cAATCGCATCACATTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGAATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAggg < 1:474610/149‑1 (MQ=255) cGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGAcc < 1:4124742/149‑1 (MQ=255) gCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCGAACCC‑ACAACCACAACCCACACGGGCGGGGGGGCCg > 1:3439015/1‑149 (MQ=37) aTCACCTTCACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGtt < 2:2762241/149‑1 (MQ=255) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCGCACCCAAAAACCAACCCCCAAAGgggggggggggcgggg > 2:2273287/1‑143 (MQ=37) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTc < 2:5053386/149‑1 (MQ=255) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCACACCC‑AAACCCACACCCCAAAGGGGCGAGGGGACCggta > 2:1648068/1‑146 (MQ=39) cACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCa < 1:2975616/149‑1 (MQ=255) cACCATAACTAGTGATAATAAAAGACATTAACCGTAGGCCGGATAAGAGGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCa < 2:4397225/149‑1 (MQ=255) aCCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAg < 2:2967907/149‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCCCACCC‑AAAACCACAACCCCAACGGGGGCGGGGGCCGGTcctt > 2:1921508/1‑146 (MQ=25) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGt < 2:1582580/149‑1 (MQ=255) cTTAACTATTGATAATAAAAGACATTCACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACAGCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 1:1091896/149‑1 (MQ=255) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTAc < 1:580710/149‑1 (MQ=255) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTAc < 2:669197/149‑1 (MQ=255) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTAc < 2:1917566/149‑1 (MQ=255) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTACCCCCACCC‑AAAACCCCTCCCCACACGGGCGCGGGGGCCGGTCAGTaa > 2:205631/1‑148 (MQ=37) aaCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCGCACCC‑AAACCCACTACCCCAAGGGGCGCGGGGACCGGTCACTACgg > 2:4306504/1‑149 (MQ=38) aaCGATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACgg < 2:3300450/149‑1 (MQ=255) aTTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAtt < 1:446925/149‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAttt < 1:3021940/149‑1 (MQ=255) ataataAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TACCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGc < 1:1682795/149‑1 (MQ=255) taaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTGCCCCCCCCCC‑AAACCACAAACCCAAAGGGGGGGGGGGCCCGTAGGGAACGGAAttttaggtg > 1:401614/1‑143 (MQ=19) aGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGt < 1:918038/149‑1 (MQ=255) aGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGt < 1:3243665/149‑1 (MQ=255) cATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCt < 2:1445928/149‑1 (MQ=255) cATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCt < 2:306676/149‑1 (MQ=255) aTTACCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTa < 1:3703809/149‑1 (MQ=255) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:251011/149‑1 (MQ=255) aCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCa < 1:548869/149‑1 (MQ=255) aCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAAGTTTACATCCCGTAC‑GGTCCCCACACCC‑GAACCCACTACCCAAATGGGCGCGGGGCCCCGTCAGTCCGGCATTTAGCATTACGGGGcgctaca > 2:1126074/1‑143 (MQ=21) gTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTGCCCACACCC‑AAACCCACTCCCCAAAGGGGCGCGGGGCCCGTTCAGGACGGAATTTATCTTTACGGTGCTATACAGCa > 2:4624269/1‑149 (MQ=38) gTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCa < 2:706277/149‑1 (MQ=255) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCAt < 2:1703715/149‑1 (MQ=255) ccGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 2:1357529/149‑1 (MQ=255) ccGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 1:3127697/149‑1 (MQ=255) ccGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 2:4561042/149‑1 (MQ=255) ccGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 2:267249/149‑1 (MQ=255) cGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAAt < 2:319862/149‑1 (MQ=255) ggATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACCTCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATa < 2:5003264/149‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 2:1796059/149‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 2:3101425/149‑1 (MQ=255) aaGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 1:3309982/149‑1 (MQ=255) aaGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑AAACCCACACCCCCAAGGGGCGGGGGGCCCGTTCAGTACGGAATTTATCTTGTCGGTGCATTCCAGCAATAACAACTgg > 2:3332704/1‑149 (MQ=255) aTGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCaa < 1:1449574/149‑1 (MQ=255) tGCGCCAGCATCGCCTCCGGCGATGCTGGCGCGTTGAATTTTACAGCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAAt < 2:1219670/149‑1 (MQ=255) tGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAAt < 1:2705029/149‑1 (MQ=255) gcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 1:746654/149‑1 (MQ=255) gcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 2:4388151/149‑1 (MQ=255) cAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCGCCCCC‑CAAACCACTCCCCAAAGGGGCGGGGGGCCCGGTCAGTACGGCATGTAGCGTGACGGGGCGATCCAGCCTTAAAAACTGGCAAAActct > 2:2955082/1‑149 (MQ=255) cAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGGAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATActct < 1:1810297/149‑1 (MQ=255) aGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCCCCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 2:1130413/149‑1 (MQ=255) aGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 2:151393/149‑1 (MQ=255) aGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACtctc < 2:2754679/149‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 2:2849605/149‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 2:2849626/149‑1 (MQ=255) tcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGc < 1:582189/149‑1 (MQ=255) atcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaaaa < 2:876966/149‑1 (MQ=255) atcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaaaa < 2:789534/149‑1 (MQ=255) atcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaaaa < 2:1943405/149‑1 (MQ=255) cGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATcc < 1:5171551/149‑1 (MQ=255) tGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcagca < 1:372956/149‑1 (MQ=255) tGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcagca < 1:373119/149‑1 (MQ=255) cTGGCGCGTTGAATTTTACATCCCGTAA‑GTTCCCCTCACCC‑TAACCCAAACCCCAAAGGGGCGAGGGGACCGTTAAGTAAGGAATTTTGCTTGTAGGTGCTATCCAGCCTAAAATAAAGGCAATACAAACACGCAAAATACGCAGCAcc > 2:3888751/1‑149 (MQ=25) tGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCg < 1:4739766/149‑1 (MQ=255) gcgTTGAATTTTACATCCCGTAC‑GTTCCCCACACCC‑TAAACCACAACCCCAAGGGGCGAGGGGACCCTTCACTAAGGAAATTAGCTTTACCGTGCTATCCACCATTAAAAAATGGCAAAAAAATCAACCAAAATCAGCAGCACCGtctc > 2:3767208/1‑149 (MQ=255) gcgTTGAATTTTACATCCCGTAC‑GTTCCCCACAACC‑AAACCCACTCCCCCAAGGGGCGAGGGGACCGTTCAGTAAGGAATTTATCTTGTCGGTGCTATACAGCCATAAATAATGGCAATACTATCAAGCAAAAAAACCAGCACCggcac > 2:3767905/1‑145 (MQ=255) cgTTGAATTTTACATCCCGTAC‑GGTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTctct < 1:979219/149‑1 (MQ=255) gTTGAATTTTACATCCCGTAC‑GGGCCCCTCACCC‑TATCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCtt < 1:1648068/149‑1 (MQ=255) aaTTTTACATCCCGTAC‑GGTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCAcc < 1:981949/149‑1 (MQ=255) ttttACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGc < 2:4644898/149‑1 (MQ=255) ccGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCg < 1:2864574/149‑1 (MQ=255) gTAC‑GTTCCCCGCACCC‑AAACCCACAACCCAAAGGGGCGAGGGGACCGTTCAGTAAGGAATTTAGCATGACCGTGCTATACAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCCCCGTCACTTCACCGCAGCGATACggg > 2:727476/1‑149 (MQ=37) aC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGtt < 1:1892972/149‑1 (MQ=255) aC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGtt < 1:1893015/149‑1 (MQ=255) aC‑GGTCCCCTCACCC‑TAACCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGtt < 2:3245970/149‑1 (MQ=255) gTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTaa > 1:2293604/1‑149 (MQ=255) | ACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTAC‑GTTCCCCTCACCC‑TAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAA > CP009273/3498066‑3498361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |