| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,502,657 | G→T | 6.3% | I172I (ATC→ATA) | yhfW ← | phosphopentomutase‑related metalloenzyme superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,502,657 | 0 | G | T | 6.3% | 1232.1 / 43.0 | 316 | I172I (ATC→ATA) | yhfW | phosphopentomutase‑related metalloenzyme superfamily protein |
| Reads supporting (aligned to +/- strand): ref base G (151/145); new base T (11/9); total (162/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 326 total aligned reads displayed.
GGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCT > CP009273/3502509‑3502805 | ggAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTcacgcacg > 1:3995570/1‑149 (MQ=255) gAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGa < 2:4327149/149‑1 (MQ=255) gAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGa > 1:1392082/1‑149 (MQ=255) gAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGa < 1:1626081/149‑1 (MQ=255) aaaCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACTAt > 1:3023607/1‑149 (MQ=255) aCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGTTCACGCACGATAc < 2:712904/149‑1 (MQ=255) aCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACATGCTCACGCACGATAc > 1:1478224/1‑149 (MQ=255) gTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGAc < 2:3275707/149‑1 (MQ=255) tCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAt < 2:244212/149‑1 (MQ=255) cATAAGCGCCAGAACGCGGCGCATTGATGCCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAtt < 2:2895650/149‑1 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt < 2:1111331/149‑1 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt < 1:3430721/149‑1 (MQ=255) gAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGcgtc < 2:840676/149‑1 (MQ=255) gAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGcgtc < 1:786815/149‑1 (MQ=255) aCGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGcgtcgt < 1:1131793/149‑1 (MQ=255) gcgcATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCaaaa < 1:586024/149‑1 (MQ=255) gcgcATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCaaaa > 2:4403788/1‑149 (MQ=255) gATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATca > 2:4516277/1‑149 (MQ=255) gATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATca < 2:3530427/149‑1 (MQ=255) tACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCAAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATcaca < 1:1743517/149‑1 (MQ=255) ccAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACaga > 1:1828122/1‑149 (MQ=255) ccAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACaga > 1:2097782/1‑149 (MQ=255) ccAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACaga > 1:4692110/1‑149 (MQ=255) cAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACagag < 2:1931531/149‑1 (MQ=255) aaTAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACagaga > 1:4176539/1‑149 (MQ=255) aTAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACagagag < 1:2541546/149‑1 (MQ=255) tAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACTATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAgagaga < 2:465314/149‑1 (MQ=255) aaaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAt > 1:5111936/1‑149 (MQ=255) aaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAtt > 1:1492531/1‑149 (MQ=255) aaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAtt > 1:4531420/1‑149 (MQ=255) aaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAtt < 2:2139776/149‑1 (MQ=255) aGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCCCCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTg > 2:1240856/1‑149 (MQ=255) aGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTg < 2:1875754/149‑1 (MQ=255) aGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTg > 2:3471234/1‑149 (MQ=255) gcgcCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTgg < 1:3179749/149‑1 (MQ=255) cgcCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGc < 2:3003111/149‑1 (MQ=255) cgcCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGc < 2:1477931/149‑1 (MQ=255) ccTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGt > 1:3795445/1‑149 (MQ=255) cttcttTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACCGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACTATACTACCAATTTTGATTTCGTCGTCAAAAGAGATCAAACAGAGATTGGCGGTa > 2:3657938/1‑149 (MQ=255) tttGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGt > 2:1114754/1‑149 (MQ=255) tttGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGt > 2:4788772/1‑149 (MQ=255) ttGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGtt < 1:43257/149‑1 (MQ=255) gCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTtat > 2:1296193/1‑149 (MQ=255) gCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTtat < 2:3397192/149‑1 (MQ=255) cTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTtata < 2:4766294/149‑1 (MQ=255) tttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAg > 1:2457250/1‑149 (MQ=255) ttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGa > 1:2446757/1‑149 (MQ=255) ttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGa < 1:2018254/149‑1 (MQ=255) cGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTgg < 2:2282203/149‑1 (MQ=255) gCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGcc > 2:2502635/1‑149 (MQ=255) gCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGcc > 1:2557715/1‑149 (MQ=255) gCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTGATAGACCTGGcc > 1:4579115/1‑149 (MQ=255) cATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACTATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCt < 2:1600935/149‑1 (MQ=255) tCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTaa > 1:4080512/1‑149 (MQ=255) tCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTaa > 2:3508647/1‑149 (MQ=255) tCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTaa > 2:269736/1‑149 (MQ=255) tCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTaa > 1:2899081/1‑149 (MQ=255) cGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTaaa < 2:4039720/149‑1 (MQ=255) agaATGCGTTGACTGTCGGTTAACAGGCCACCAACTGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATc > 2:3314099/1‑149 (MQ=255) agaATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATc < 2:4450260/149‑1 (MQ=255) tGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGcc > 1:3308526/1‑149 (MQ=255) tGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGcc > 1:2765919/1‑149 (MQ=255) tGCGTTGACTGTAGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTAACTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGcc < 1:1323110/149‑1 (MQ=255) gCGTTGACTGTCGGTTGACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCt < 2:4871646/149‑1 (MQ=255) aCTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGAt > 2:1841653/1‑149 (MQ=255) aCTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGAt < 2:4067097/149‑1 (MQ=255) cTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGAtt < 1:1069942/149‑1 (MQ=255) tGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTa > 2:1700701/1‑149 (MQ=255) gTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTAt < 1:4870415/149‑1 (MQ=255) gTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGcc > 1:475183/1‑149 (MQ=255) gTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGcc > 1:2240115/1‑149 (MQ=255) cAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCg > 1:68523/1‑149 (MQ=255) aGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACTATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGc > 1:4398129/1‑149 (MQ=255) ggCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCa > 1:30918/1‑149 (MQ=255) ccaccaAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAAc < 2:1034099/149‑1 (MQ=255) caccaAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAAcc < 1:4254664/149‑1 (MQ=255) ccaAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGc > 1:930203/1‑149 (MQ=255) caAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTTATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGcc < 1:1280867/149‑1 (MQ=255) caAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGcc < 1:2358876/149‑1 (MQ=255) aTGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGa < 1:3664776/149‑1 (MQ=255) aTGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGa < 2:5112673/149‑1 (MQ=255) aTGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGa < 2:5202875/149‑1 (MQ=255) aTGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGAc > 1:2347238/1‑149 (MQ=255) gACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGAccc < 1:4984339/149‑1 (MQ=255) ccgaccTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGaaa > 1:4922560/1‑149 (MQ=255) ccgaccTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGaaa > 1:3568558/1‑149 (MQ=255) ccgaccTGTACCTGCTCACGCACGATACGACCAATTGTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGaaa < 1:3871680/149‑1 (MQ=255) cTGTACCTGCTCACGCACTATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCa > 1:5178043/1‑149 (MQ=255) cTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCa < 2:1365386/149‑1 (MQ=255) tGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAg < 1:3915100/149‑1 (MQ=255) gTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGa < 1:3215114/149‑1 (MQ=255) gTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGa > 2:121268/1‑149 (MQ=255) tACCTGCTCACGCACGATACGACCAATTTTGAGTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGat < 2:625492/149‑1 (MQ=255) cTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatcat < 1:3349149/149‑1 (MQ=255) cTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTAGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatcat > 2:2045615/1‑149 (MQ=255) cTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGc < 2:3936852/149‑1 (MQ=255) tCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGcc > 2:1548077/1‑149 (MQ=255) acgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCAc < 2:2598278/149‑1 (MQ=255) acgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCAc < 1:2208032/149‑1 (MQ=255) acgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGgcg > 2:3031675/1‑149 (MQ=255) | GGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCT > CP009273/3502509‑3502805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |