BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,822,345	T→G	7.2%	V14G (GTT→GGT)	xanP →	xanthine permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,822,345	0	T	G	7.2%	669.4 / 4.6	270	V14G (GTT→GGT)	xanP	xanthine permease
Reads supporting (aligned to +/- strand): ref base T (130/112); new base G (15/12); total (146/124)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 281 total aligned reads displayed.

AAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTA  >  CP009273/3822197‑3822493

aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGt                                                                                                                                                      <  2:258779/149‑1 (MQ=255)

 aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGtt                                                                                                                                                     <  1:1462844/149‑1 (MQ=255)

 aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGtt                                                                                                                                                     <  1:2129424/149‑1 (MQ=255)

  aaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCGGTTg                                                                                                                                                    >  2:1347979/1‑149 (MQ=255)

    gTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTgcg                                                                                                                                                  >  1:2563082/1‑149 (MQ=255)

       cATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAAAGTTTGCTTTACTCTATCGGTCAGCTAAAATGACCGCTTTGATACCACGGGATTGTTTTCGATGTATGTTTCCACCCTCGAGACAGAAAATGCGCAAACGGTTGCGCAg                                                                                                                                               >  2:5055470/1‑149 (MQ=255)

        aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCAGa                                                                                                                                              >  1:4879027/1‑149 (MQ=255)

         tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGAc                                                                                                                                             <  2:1093158/149‑1 (MQ=255)

           tATCTCATTTATATATTTTGATGAGGATGTGGCAAACGTTTGATTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCAGGGGATTGTTTTCGATGTCTGTTTCCACCCTCGTGTCAGAAAATGCGCAACCGGTTGCGCAGACTc                                                                                                                                           <  2:3562533/149‑1 (MQ=255)

                  tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTTTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAg                                                                                                                                    <  2:3265915/149‑1 (MQ=255)

                   ttAAATATTTAGCTGAGTTTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGTATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCATAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGc                                                                                                                                   <  2:3906238/149‑1 (MQ=255)

                    tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCg                                                                                                                                  >  2:825800/1‑149 (MQ=255)

                     aaaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCAACCGGGTGCGCAGAATCAAAAAAGCGa                                                                                                                                 >  1:121650/1‑149 (MQ=255)

                      aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGaa                                                                                                                                >  2:4058986/1‑149 (MQ=255)

                      aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAG‑AAATGCGCAAACCGTTTCGCACACAAAAAAAAACGAAc                                                                                                                               >  1:1042436/1‑149 (MQ=255)

                        tatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACt                                                                                                                              >  2:1707217/1‑149 (MQ=255)

                        tatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACt                                                                                                                              <  2:1666717/149‑1 (MQ=255)

                         atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAACACCGAAcag                                                                                                                             >  2:3117807/1‑147 (MQ=255)

                          tttAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGa                                                                                                                            >  2:244724/1‑149 (MQ=255)

                               aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACAGCTTTaa                                                                                                                       >  2:3926754/1‑148 (MQ=255)

                                tGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGGAACCGGGTGCGCAGACGCAAAACAGCGCACTGCTTTagc                                                                                                                      >  1:2827048/1‑147 (MQ=255)

                                 gAGGTTGTGGCAAACTTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCTCGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCg                                                                                                                     <  2:1877217/149‑1 (MQ=255)

                                 gAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGCCTCAAAACAGCGAACTGATTTACCg                                                                                                                     >  2:4241668/1‑149 (MQ=255)

                                   ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGATGCGCAGACTCAAAACAGCGAACTGATTTACCgac                                                                                                                   >  2:4457640/1‑147 (MQ=255)

                                   ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAACCCTTGCGCAGACTCAAAAAAACGAACAAATTTaaaata                                                                                                                   >  1:4829704/1‑144 (MQ=255)

                                    gATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACTCAAAACACCGAACAGATTTAACGTCt                                                                                                                  >  1:1646667/1‑149 (MQ=255)

                                     ttgtgGCAAATGTTTGCTTTTCTCTTTCGGTCAGCTAAACTGCCCGCTTTGCTACCTGGGTTTTGTTTTCGTTGTGTGTTTCCACCCTCGAGTCATAAACGGCGCAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCtt                                                                                                                 <  1:1126871/148‑1 (MQ=255)

                                     aTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGTTGGGCAGACTAAAAACAACGAACAGATTTAACGTAtt                                                                                                                 >  1:4954423/1‑149 (MQ=255)

                                            aaaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATc                                                                                                          >  2:2910775/1‑149 (MQ=255)

                                             aaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGACTTGAAGATCg                                                                                                         >  2:2109148/1‑149 (MQ=255)

                                              aCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                                        >  2:2061827/1‑149 (MQ=255)

                                              aCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACACCGCACTGATTTAACGTCTTGAAGATCGt                                                                                                        >  1:5156980/1‑149 (MQ=255)

                                              aCGTTTGCTTTTCTCTGTCGGTCAGCTAAACTGCCCGCTTTGCTACCCCGGGATTGTTTTCGATGTCGGTTTCCACCCTCGAGTCAGAAAAGGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                                        <  2:3595196/149‑1 (MQ=255)

                                                gTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTcc                                                                                                      >  2:3981154/1‑149 (MQ=255)

                                                 tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccg                                                                                                     >  2:1780790/1‑149 (MQ=255)

                                                  ttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTccgc                                                                                                    >  2:2171952/1‑149 (MQ=255)

                                                       tttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCtt                                                                                               >  2:586583/1‑149 (MQ=255)

                                                        ttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTGCGCAGACTAAAAAAAGCGAAAAGATTTAAAGTATTTAATATAGTccgccccatc                                                                                              >  1:3135367/1‑144 (MQ=255)

                                                         tctcTTTGGGTCATATAAAATGCCGGCTTTGCTACCTGGGTTTTGTTTTCGTTGTTTGTTACCACCCTCGATTCAGAAACTGCGCACCGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTcc                                                                                             <  1:2686059/149‑1 (MQ=255)

                                                         tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTcc                                                                                             <  2:1926770/149‑1 (MQ=255)

                                                         tctcTTTCGGTCAGCTAAAATGCCCGATTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTcc                                                                                             <  2:353354/149‑1 (MQ=255)

                                                             tttCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAAACGAACAGATTTAACGTCTTTAAGATCTGCCGCCGCTTCCTCaa                                                                                         >  1:623417/1‑149 (MQ=255)

                                                                 ggTCAGCTAAAAGGCCCGCTTTGCTACCACGGGTTTGTTTTCTAGGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAccc                                                                                     <  1:2942065/149‑1 (MQ=255)

                                                                 gctCAGATAATATGCCCGATTTGCTACCTGGTTTTTGTTTTGTTTTTCTGTTCCCACCCTCGTGTCATAAAATGCGCAACGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAccc                                                                                     <  1:1558453/147‑1 (MQ=255)

                                                                  gTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAACCGAACTGATTTAACGTCTTTAAGATCGTCCGCCGCATCCACAAAccca                                                                                    >  1:3644605/1‑148 (MQ=255)

                                                                   tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACCCGGGTGCGCAGACGCAAAAAAGCGAACAGATTTAACGTCTTGAATATAGTCCGCCCCGGCCGCAAAcccac                                                                                   >  1:3491410/1‑147 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                                 >  2:3890679/1‑149 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                                 >  2:401237/1‑149 (MQ=255)

                                                                     aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAATATAGTCCGCCGCGGCCTCAAAACCAGtt                                                                                 >  1:2291203/1‑149 (MQ=255)

                                                                           aaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACACAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgc                                                                           >  2:371250/1‑149 (MQ=255)

                                                                            aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                                          >  2:2950548/1‑149 (MQ=255)

                                                                            aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                                          >  2:55264/1‑149 (MQ=255)

                                                                               cccGATTTGCTACCTCGTTTTTTTTTTCGATGTGTGTCCCCACCCTCTATTAAAAAAATGCGCACCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGt                                                                       <  1:3474956/149‑1 (MQ=255)

                                                                                ccGCTGTGCTCCCCGGGGTTTGTTTTGGTTGTGTGTTACCACCCTCGTGTCAGAATCGGCGCCCGCGGGTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTc                                                                      <  1:2419049/149‑1 (MQ=255)

                                                                                 cGCTGTGCTCCCCCGGGATTGTTTTCGATGTGTGTTTCCCCCCTCGAGTCAGACAATGCGCAACCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCa                                                                     <  2:906931/149‑1 (MQ=255)

                                                                                  gCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                                    >  2:3667992/1‑149 (MQ=255)

                                                                                       gatACCACGGGATTTTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATct                                                               <  2:101/147‑1 (MQ=255)

                                                                                        ccaCCCCGGGATTGTTTCGGTTGTCTGTTACCACCCTCGAGACATAACCGGCCCACCGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctg                                                              <  1:4008448/147‑1 (MQ=255)

                                                                                           ccAGGGGATTGTTTTCGATGTCTGTTTCCACCCTGGTGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgctg                                                           <  2:4919062/149‑1 (MQ=255)

                                                                                             aCGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCACCCGTTTCGCAGACTCAAAACAGCGAACTGATTTACCGTCATGAAGATCGTCCGCCGCTTCCTCAAACCCAGTTTTGCGCCAGTCAGCAACTGCTGGc                                                         >  1:3210619/1‑149 (MQ=255)

                                                                                             aCGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGc                                                         <  2:4683721/149‑1 (MQ=255)

                                                                                               gggATTGTTTTCTATGTCTGTTACCACCCTCGAGTCACAAAAGGCGCACCGGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGa                                                       <  1:417674/149‑1 (MQ=255)

                                                                                               gggATTGTTTTCGATGTCTGTTTCCCCCCTCGAGTCAGAAAATGCGCCCCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCACACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGa                                                       <  2:385202/149‑1 (MQ=255)

                                                                                               gggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGa                                                       >  2:1284894/1‑149 (MQ=255)

                                                                                                ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCACAAACCCGGTTTGCCGCCTGTCAGCAACAGCTGGCGAt                                                      >  1:855632/1‑149 (MQ=255)

                                                                                                 gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAtt                                                     >  2:351337/1‑148 (MQ=255)

                                                                                                  tttGTTTTGGAGGTCTGTTCCCACCCGCGAGTCAGAAACTGCGCACCCGGGGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                                    <  1:2477451/148‑1 (MQ=255)

                                                                                                  aTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCAACCGGTTGCGCAGACTCAAAACAGCGCACTGATTTACCGTCTTGAATATCGTCCGCCGCGTCCTCAAACCCAGTTTGCCGCCAGTCAGCATCTGCGTGCGATGt                                                    >  1:4561294/1‑149 (MQ=255)

                                                                                                  aTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                                    <  2:1182643/149‑1 (MQ=255)

                                                                                                    tGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAAGCGAACAGATTTAACGTCTTTTAGATAGTCCGCCGCGTCCTCAAACCCTGTTTTGCGCCAGTAAGCAAATGCTGGCGATGtta                                                  >  1:195547/1‑148 (MQ=255)

                                                                                                      ttttCTTTGTCTTTTACCCCCCTCGAGACACAAAATGCGCACCCGGTGCCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGt                                                <  1:463134/149‑1 (MQ=255)

                                                                                                       tttCGATGTCTGTTTCCCCCCCCGAGTCAGAAAAGGCGCACCCGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGtt                                               <  1:1816867/149‑1 (MQ=255)

                                                                                                        ttCGTTGTCTGTTACCCCCCTCGAGTCATAAAAGGCGCACCGGGGGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTg                                              <  1:1364493/149‑1 (MQ=255)

                                                                                                         tCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGc                                             >  2:5167934/1‑149 (MQ=255)

                                                                                                          cGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCg                                            >  2:3356628/1‑149 (MQ=255)

                                                                                                           gATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                                           <  2:731479/149‑1 (MQ=255)

                                                                                                            ttGTCTGTTTCCACCCTCGAGTCAGAAATTGCGCAACGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGt                                          <  1:3367471/148‑1 (MQ=255)

                                                                                                            ttGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGt                                          <  2:4751929/148‑1 (MQ=255)

                                                                                                                 tGTTTCCCCCCTCGAGTAATAAAATGCGCAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCa                                     <  1:1677724/149‑1 (MQ=255)

                                                                                                                     tCCACCCTCGAGTCAGAACATGCGCACCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCGTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTGTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGcc                                 <  2:3082394/149‑1 (MQ=255)

                                                                                                                        aCCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGGCTTTAATATCGTCCGCCGCTTCCTCAAACCCAGTTTGGCGCCTGTCAGCAACTTCTGGCGATGTTCGTTGCGGTGATAACGCCAgc                              >  1:3883764/1‑149 (MQ=255)

                                                                                                                            tCGAGTCAGAAAATGCGCAACCGGGTGCGCAGACTCAAAAAAGCGAACAGATTTACCGTCTTGAAGATCGTCCCCCGCTTCCTCAAACCCAGGTTTCCGCCTGTAAGCATCAGCTGGCGTTGTTCGGTGCGGTGTTCACGCCCGCGCTa                          >  1:1680018/1‑149 (MQ=255)

                                                                                                                              gAGTCAGAAAATGCGCAACCGGTTGCACAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTAtt                        <  2:155187/149‑1 (MQ=255)

                                                                                                                               aGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCGATTa                       >  2:2325089/1‑149 (MQ=255)

                                                                                                                                 taaGAAAATGCGCCCCGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt                     <  1:3117807/147‑1 (MQ=255)

                                                                                                                                  cAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATc                    <  2:1998434/149‑1 (MQ=255)

                                                                                                                                   aGAAATTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt                   <  2:2506360/149‑1 (MQ=255)

                                                                                                                                   aGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGTATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt                   <  2:3429390/149‑1 (MQ=255)

                                                                                                                                     aaatggcgcCACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc                 <  1:4388021/144‑1 (MQ=255)

                                                                                                                                      aaaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc                >  1:924939/1‑149 (MQ=255)

                                                                                                                                      aaaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATGTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc                <  2:2763243/149‑1 (MQ=255)

                                                                                                                                       aaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa               <  2:2804471/149‑1 (MQ=255)

                                                                                                                                       aaTGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa               <  2:3062926/149‑1 (MQ=255)

                                                                                                                                             cAACGGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCt         <  1:3321361/149‑1 (MQ=255)

                                                                                                                                               aCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg       >  2:4417560/1‑149 (MQ=255)

                                                                                                                                                 cGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGt     >  1:5067056/1‑149 (MQ=255)

                                                                                                                                                 cGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGt     <  2:4854042/149‑1 (MQ=255)

                                                                                                                                                  ggTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGtt    <  1:2910775/149‑1 (MQ=255)

                                                                                                                                                   gTTGCGCGGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCATGCCAGCGCTATTAATCTGCCAGGCGCTGGGttt   >  1:3926302/1‑149 (MQ=255)

                                                                                                                                                    ttGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTa  >  1:1780408/1‑149 (MQ=255)

AAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTA  >  CP009273/3822197‑3822493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`