| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,868,359 | C→A | 11.9% | A54A (GCG→GCT) | dgoR ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,868,359 | 0 | C | A | 11.9% | 1262.7 / 107.1 | 354 | A54A (GCG→GCT) | dgoR | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (139/173); new base A (18/24); total (157/197) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 356 total aligned reads displayed.
GATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGTT > CP009273/3868211‑3868506 | gATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTc > 2:2199632/1‑149 (MQ=255) ttCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGcc > 1:1577697/1‑149 (MQ=255) ttCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGcc < 2:3339970/149‑1 (MQ=255) cGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCAt > 1:866131/1‑149 (MQ=255) cGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCAt < 1:1816202/149‑1 (MQ=255) ttCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCg > 1:4411540/1‑149 (MQ=255) tCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGa < 1:3114041/149‑1 (MQ=255) tCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGa > 2:1209577/1‑149 (MQ=255) cGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATCTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCAGTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGaa < 1:1748291/149‑1 (MQ=255) gCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAAc < 1:4356301/149‑1 (MQ=255) cATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGa > 2:2956176/1‑149 (MQ=255) cATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGa > 2:921896/1‑149 (MQ=255) ggCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAaca < 2:710930/149‑1 (MQ=255) aCTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCt > 1:3380123/1‑149 (MQ=255) tGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCa < 2:3994362/149‑1 (MQ=255) tGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCa < 2:4261032/149‑1 (MQ=255) gATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCAc < 2:1933452/149‑1 (MQ=255) gATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCAc > 1:1341721/1‑149 (MQ=255) aaGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGga < 2:3789452/149‑1 (MQ=255) aGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgat < 2:5044508/149‑1 (MQ=255) aGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgat < 2:5199468/149‑1 (MQ=255) aGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGgat > 2:1036035/1‑149 (MQ=255) gacGTGGGTAGTAGTCATTTTCCAGAACACATATCAGAACGTCAGTGTCGAGGTAAATCCACTCGTTACGCGGTGCCACAAACGCCCAGCGATAACGTATAATTTCAATCAGCCTCATCCCCAACACCGAACGGAACACATCACTgatg > 1:3332422/3‑149 (MQ=255) gCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGgatg > 2:1505846/1‑149 (MQ=255) gggTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGtt < 1:2330672/149‑1 (MQ=255) tCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTgcg > 2:1697873/1‑149 (MQ=255) aGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAg < 1:688431/149‑1 (MQ=255) gTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAgg < 1:3433957/149‑1 (MQ=255) cATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGtt < 2:633770/149‑1 (MQ=255) cATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGtt > 2:209220/1‑149 (MQ=255) ccAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAAc < 1:4979904/149‑1 (MQ=255) gCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcc < 1:373783/149‑1 (MQ=255) gCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcc > 2:3473096/1‑149 (MQ=255) aCCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAActcctc > 2:2450590/1‑149 (MQ=255) cAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGtt < 1:2151492/149‑1 (MQ=255) aGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTc < 2:447381/149‑1 (MQ=255) tACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCg < 2:4656191/149‑1 (MQ=255) aCGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGc > 1:394191/1‑149 (MQ=255) gTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCt < 1:4841656/149‑1 (MQ=255) tCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTc < 1:2877170/149‑1 (MQ=255) cAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCa < 2:1115962/149‑1 (MQ=255) aGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAg > 2:1003414/1‑149 (MQ=255) gtgtCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGc < 1:4076061/149‑1 (MQ=255) gtgtCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGc > 2:612207/1‑149 (MQ=255) tgtCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGcc < 2:507535/149‑1 (MQ=255) ggTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAgc < 2:3861790/149‑1 (MQ=255) aagtCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAgcggc < 1:123037/146‑1 (MQ=255) ttCCACGGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGa < 2:4846526/149‑1 (MQ=255) ccACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGc < 2:4409097/149‑1 (MQ=255) aCTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCt > 1:1885603/1‑149 (MQ=255) aCTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCt > 2:2526744/1‑149 (MQ=255) aCTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCt > 1:92111/1‑149 (MQ=255) cTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTg < 2:4562145/149‑1 (MQ=255) gTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCa < 2:2413986/149‑1 (MQ=255) gcgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAt < 2:1827122/149‑1 (MQ=255) cgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAtt < 1:60560/149‑1 (MQ=255) cgGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTAtt < 1:4433521/149‑1 (MQ=255) ccACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCg < 1:5185209/149‑1 (MQ=255) caAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGa > 1:1435072/1‑149 (MQ=255) aCGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACg > 1:3864055/1‑149 (MQ=255) gCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGAt < 2:3112249/149‑1 (MQ=255) gCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGAt > 2:2297147/1‑149 (MQ=255) gCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCAATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGAt < 1:246334/149‑1 (MQ=255) ccccGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATc < 2:3659671/149‑1 (MQ=255) gcgATAACGTTTCTTTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGTTGTTGCGCGAGGTTGAAAACTCCTCACAGTGTTCCGCCTGAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGtt < 1:1346715/149‑1 (MQ=255) gcgATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGtt < 2:3128109/149‑1 (MQ=255) gcgATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGAAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGtt < 1:4181392/149‑1 (MQ=255) gATAACGTTTCATTTCAATCAGCCGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTa < 2:3985300/149‑1 (MQ=255) aaCGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTAccc > 1:238738/1‑149 (MQ=255) aaCGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTAccc > 1:5053574/1‑149 (MQ=255) cGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAg > 2:125197/1‑149 (MQ=255) gTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGc > 2:3258677/1‑149 (MQ=255) ttcatttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGt < 2:2901434/149‑1 (MQ=255) catttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTaa < 1:228933/149‑1 (MQ=255) atttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAAt > 1:1015380/1‑149 (MQ=255) atttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAAt > 1:2826843/1‑149 (MQ=255) atttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAAt < 2:3700785/149‑1 (MQ=255) ttcaATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGa < 2:1601751/149‑1 (MQ=255) aaTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACaa > 2:3218238/1‑149 (MQ=255) aaTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACACAGCGTAATGACaa > 2:2362548/1‑149 (MQ=255) aTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAAt < 2:4181018/149‑1 (MQ=255) aTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAAt > 1:4299254/1‑149 (MQ=255) aTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAAt < 1:567991/149‑1 (MQ=255) aTCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAAt > 2:268680/1‑149 (MQ=255) tCAGCCGCTTCTCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATg < 1:3773411/149‑1 (MQ=255) tCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATg > 1:2142869/1‑149 (MQ=255) cAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGc < 2:3431975/149‑1 (MQ=255) cAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGc < 1:2649641/149‑1 (MQ=255) ccGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGAt < 1:2896519/149‑1 (MQ=255) cGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATc < 1:5156215/149‑1 (MQ=255) cGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATc < 2:3065388/149‑1 (MQ=255) cGCTTAGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATc < 2:707370/149‑1 (MQ=255) gCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCg > 1:2295637/1‑149 (MQ=255) gCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCg > 1:1162294/1‑149 (MQ=255) gCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCg < 1:1063183/149‑1 (MQ=255) cTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCgg < 2:488188/149‑1 (MQ=255) ttCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGt > 1:4725845/1‑149 (MQ=255) ttCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGt < 1:3515241/149‑1 (MQ=255) ttCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTACCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGt > 1:26936/1‑149 (MQ=255) tCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGtt < 2:5152336/149‑1 (MQ=255) | GATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACCCATTGCAGTACGTCAGTGTCGAGGTAATTCCACTGGTTACGCGGTGCCACAAACGCCCCGCGATAACGTTTCATTTCAATCAGCCGCTTCGCCATCAGCGAACGGAACACCTCACGGATGATGTTGCGCGAGGTTGCAAACTCCTCACAGAGTTCCGCCTCAGCCGGAAGCGGCGAGCCTGGCACGTATTTGCCGTGAACGATCTGTTTACCCAGCGTAATGACAATGCGATCGGTT > CP009273/3868211‑3868506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |