| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,897,492 | G→T | 8.4% | P489Q (CCG→CAG) | bglF ← | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,897,492 | 0 | G | T | 8.4% | 1630.1 / 86.7 | 427 | P489Q (CCG→CAG) | bglF | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component |
| Reads supporting (aligned to +/- strand): ref base G (168/223); new base T (18/18); total (186/241) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 437 total aligned reads displayed.
TGACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACC > CP009273/3897344‑3897640 | gACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCgg > 2:733966/1‑149 (MQ=255) gACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCgg < 2:5067013/149‑1 (MQ=255) cAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGcaca > 2:1726848/1‑149 (MQ=255) aaTGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACaa < 2:2076861/149‑1 (MQ=255) aTGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTCTCAGCGACGTGAATGAGCGGCACAAt > 1:1296021/1‑149 (MQ=255) aTGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAAt > 1:440315/1‑149 (MQ=255) aTGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAAt < 1:2091565/149‑1 (MQ=255) tGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAAtc > 2:4637444/1‑149 (MQ=255) cGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTc < 1:3222094/149‑1 (MQ=255) tgtAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCAt > 2:564655/1‑149 (MQ=255) gtAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCACCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAAGCTCTCCCGTCATc < 2:4685299/149‑1 (MQ=255) gtAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATc > 1:2937482/1‑149 (MQ=255) ggCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAAc < 1:1390473/149‑1 (MQ=255) gCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACa < 1:4136434/149‑1 (MQ=255) gAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGa > 1:3391792/1‑149 (MQ=255) acaacGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATa > 1:60547/1‑149 (MQ=255) aaGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGccc < 2:4349483/149‑1 (MQ=255) aaGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGccc < 1:724476/149‑1 (MQ=255) aaGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGccc < 2:604705/149‑1 (MQ=255) aGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGTCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCt > 2:2123047/1‑149 (MQ=255) aGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCt > 1:3177901/1‑149 (MQ=255) cAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGc > 1:2453169/1‑149 (MQ=255) aaTTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCt > 1:380245/1‑149 (MQ=255) aCCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtg < 2:272084/149‑1 (MQ=255) aCCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtg < 2:2015902/149‑1 (MQ=255) cccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtgg < 2:343343/149‑1 (MQ=255) ccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtggt < 1:4900122/149‑1 (MQ=255) ccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtggt < 1:1980609/149‑1 (MQ=255) cGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGgtggtg < 2:1427098/149‑1 (MQ=255) cAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGta < 1:3940707/149‑1 (MQ=255) aaCCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGtaa > 2:4997985/1‑149 (MQ=255) cGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGtaataa < 2:3789305/149‑1 (MQ=255) ggAGAACGCACGTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCACCAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAAc < 2:3396339/149‑1 (MQ=255) gagaACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAAcc < 2:2386007/149‑1 (MQ=255) gagaACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAAcc < 2:4018071/149‑1 (MQ=255) gaACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACctc < 1:1252732/149‑1 (MQ=255) aCTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtgt > 2:4063121/1‑149 (MQ=255) aCTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtgt < 1:4195321/149‑1 (MQ=255) aCTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtgt < 2:1904238/149‑1 (MQ=255) aCTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtgt > 2:2214534/1‑149 (MQ=255) cACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtc < 2:1852173/149‑1 (MQ=255) cACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtc < 1:4033473/149‑1 (MQ=255) aCCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtct > 1:981934/1‑149 (MQ=255) cAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTctct < 2:910504/149‑1 (MQ=255) aaCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCtt < 2:147918/149‑1 (MQ=255) aaCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCtt > 1:4234103/1‑149 (MQ=255) aCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTg < 2:295855/149‑1 (MQ=255) aCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTg < 1:4709313/149‑1 (MQ=255) aCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTg > 1:87126/1‑149 (MQ=255) gAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCgg < 1:3034305/149‑1 (MQ=255) aGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCggg < 2:488381/149‑1 (MQ=255) aGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCggg > 1:266480/1‑149 (MQ=255) ggCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGc < 1:1002261/149‑1 (MQ=255) gAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCAccc > 1:2328038/1‑149 (MQ=255) gAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCAccc > 1:286319/1‑149 (MQ=255) ggCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTgcg > 1:1723900/1‑149 (MQ=255) ggCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTgcg > 1:3754731/1‑149 (MQ=255) aaTACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctg > 2:1059354/1‑149 (MQ=255) tACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctggc > 1:207966/1‑149 (MQ=255) cTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGa > 2:859975/1‑149 (MQ=255) cTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGa > 1:4852451/1‑149 (MQ=255) tttACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGAc < 2:692591/149‑1 (MQ=255) tttACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGAc > 2:2992431/1‑149 (MQ=255) aCCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGtt < 1:2616676/149‑1 (MQ=255) aCCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGtt > 1:3624980/1‑149 (MQ=255) cccAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGttt < 2:1168285/149‑1 (MQ=255) cAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAg < 2:4499923/149‑1 (MQ=255) cAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAg < 2:3630208/149‑1 (MQ=255) aaCAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGc > 1:626730/1‑149 (MQ=255) aaCAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGc > 1:4591130/1‑149 (MQ=255) cAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCgg > 1:3107650/1‑149 (MQ=255) gCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtga < 2:2616104/149‑1 (MQ=255) gCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtga < 2:3502308/149‑1 (MQ=255) gCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtga < 1:694428/149‑1 (MQ=255) cACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtgatg < 1:1475280/149‑1 (MQ=255) aCTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtgatga < 2:3289318/149‑1 (MQ=255) aCTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtgatga < 2:4217009/149‑1 (MQ=255) cTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaa < 1:5117007/149‑1 (MQ=255) tGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaa < 1:2726982/149‑1 (MQ=255) ggCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaat > 1:1778381/1‑149 (MQ=255) gCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatg > 1:3410128/1‑149 (MQ=255) cAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatga < 2:2328038/149‑1 (MQ=255) aaaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatgaa < 2:821666/149‑1 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAg > 1:1666420/1‑149 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAg > 1:2368528/1‑149 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAg > 1:255349/1‑149 (MQ=255) aCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGc > 1:4542009/1‑149 (MQ=255) tGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATc > 1:4774276/1‑149 (MQ=255) ggTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCa < 2:4682089/149‑1 (MQ=255) ggTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCa > 1:557454/1‑149 (MQ=255) gTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCAc < 2:380245/149‑1 (MQ=255) aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTAc < 2:3232594/149‑1 (MQ=255) aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTAc < 1:330109/149‑1 (MQ=255) aCGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGAc < 1:3599526/149‑1 (MQ=255) cGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACa < 1:2226989/149‑1 (MQ=255) gAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAAt < 1:115278/149‑1 (MQ=255) aaTGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATg > 1:1564832/1‑149 (MQ=255) cGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATATCCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAAc < 1:2295922/149‑1 (MQ=255) cGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAAc < 2:305918/149‑1 (MQ=255) cGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAAc < 1:3256198/149‑1 (MQ=255) | TGACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACC > CP009273/3897344‑3897640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |