| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,129 | T→G | 6.9% | V301G (GTT→GGT) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,129 | 0 | T | G | 6.9% | 590.9 / 2.5 | 220 | V301G (GTT→GGT) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base T (97/101); new base G (20/2); total (117/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.65e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 227 total aligned reads displayed.
TTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACA > CP009273/4602981‑4603277 | tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGt > 2:789405/1‑149 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGtt < 1:4142733/149‑1 (MQ=255) aTTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTgg < 1:549913/149‑1 (MQ=255) aTTGAGAAACCACCGGGAAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTgg < 1:4997506/149‑1 (MQ=255) ttGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGc < 1:2168856/149‑1 (MQ=255) ttGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑CGTTTGc > 1:1091593/1‑149 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGGTGGCaa > 2:3280914/1‑149 (MQ=255) gaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTCGCCAC‑GGTTGGCAAGc > 1:756537/1‑149 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCt < 2:1021802/149‑1 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCt < 1:74874/149‑1 (MQ=255) caccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGGTGGCAAGCTATTa > 2:2557454/1‑149 (MQ=255) ccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCAC‑CGTTGGCAAGCGATTAAc > 1:285649/1‑149 (MQ=255) cGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACt < 1:4646077/149‑1 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑CGTTTGCAAGCTATTaaaag > 1:233648/1‑146 (MQ=255) gCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTCCTAGCCAC‑CGTTTGGAAGCTATTTACTGaa > 1:652905/1‑149 (MQ=255) gCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGaa < 1:3883284/149‑1 (MQ=255) gCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGGTGGCAACCGAATAACTGaa > 1:1149451/1‑149 (MQ=255) gCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTACTCGCCAC‑CGTTGGCCAGCCATTAAATGaa > 1:1872693/1‑149 (MQ=255) aaGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGaaaa < 2:1069547/149‑1 (MQ=255) aaGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCAC‑GGTTTGCAAGCAATTTACTGaaaa > 2:2661927/1‑149 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAg < 1:57755/149‑1 (MQ=255) cTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAgc < 1:2836244/149‑1 (MQ=255) cTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAgc < 1:3105596/149‑1 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTGCGCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAgcg > 1:2511541/1‑149 (MQ=255) cGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGcgcc < 1:5146129/149‑1 (MQ=255) atatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCt < 2:687792/149‑1 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAATCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGGTGGCAAGCGATTAACTGTAAAAGCGCCGCtt > 2:4468675/1‑149 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCtt > 2:4671810/1‑149 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCtt < 1:1625064/149‑1 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑CGTTTGCAACCAAATAAAAGAAAAAAcgccgcat > 1:4856640/1‑147 (MQ=255) tATCCGCCGAAGCCATTACTTAGTATCGCGGTTGGATTTCGTATTCCGGCGCTGCGTTATGACTTAAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCt < 2:3571911/149‑1 (MQ=255) tATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTACTAGCCAC‑CGTTGGCAAGCGATTAAAAGAAAAAGCGCCGCGTACCCGCCAACt > 2:3957693/1‑149 (MQ=255) tATCCGCCGAAGCCATTACATAGTATCGCGCTGGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCt < 2:1129389/149‑1 (MQ=255) aTCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGTATTCCGGCGCTGCGTGAAGAATATAAACTTGGGCGTTTATGCGGTCTTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTg < 1:3709617/149‑1 (MQ=255) aTCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTTAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTg < 1:3709665/149‑1 (MQ=255) tCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑CGTTGGCCAGCTATTAAATGAAAAAGCGCCGCATAACCCCCATCAgg > 1:806150/1‑149 (MQ=255) tCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTTCTCGCCAC‑GGTTTGGAAGCGATTAAATGAAAAATAGCCGCGTAACcccccacagg > 1:3251527/1‑143 (MQ=255) ccgccgACGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTAGGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGt < 1:4624926/149‑1 (MQ=255) ccgccgACGCAATTACATAGTAGCGCGCTTGGCAGGCGGATTCCGGCGCGGCGGGAAGAATATAAAGTGGGGGGTTTATGGGGTCGTTATTTCCGCGCCAG‑GGGTGGCAAGCTATTACCTCAAAAAGCGCCGCTTACCCGCCATCTGGt < 1:4429509/149‑1 (MQ=255) gccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTAGCCAC‑GGTTGGCAAGCTATTAAATGAAAAATCGCCCCGTAACCGCCAACGGGTGc > 2:1312685/1‑149 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCC‑CGTTGGCCAGCGATTAACTGAAAAAGCGCCCCATAACCCCCCACAGGTGCCAgt > 1:2963394/1‑149 (MQ=255) cATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtggtg < 2:4705640/149‑1 (MQ=255) cATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtggtg < 1:865006/149‑1 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGa < 1:843409/149‑1 (MQ=255) aCATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCC‑GGTTGGCAAGCTATTAAATGAAAAAGCGCCGCTTACCCGCCAACAGGTGCCAGTGGTGACGc > 2:1894420/1‑149 (MQ=255) aCATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGc > 2:3815079/1‑149 (MQ=255) cATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTTCACGCCCC‑GGGTGGCAACCTATTAAAAGAAAAAGCCCCGCGTAACCCCCCACAGGTGGCACTGGTGGCGcc > 1:2362370/1‑149 (MQ=255) cATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGcc < 2:63471/149‑1 (MQ=255) gTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCTTGAAGACTATAAAATTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGAAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGTTGCCAGTGGTGACGCCGGaa < 2:1738485/149‑1 (MQ=255) gTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGaa > 2:362665/1‑149 (MQ=255) gTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGGTGGCCAGCTATTAAATGAAAAATCGCCGCTTACCCGCCAACTGGTGCCAGTGGTGACGCCGGaa > 1:314017/1‑149 (MQ=255) tATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAt < 1:1012959/149‑1 (MQ=255) tATCGCGCGTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACGGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAt < 2:2386056/149‑1 (MQ=255) aTCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCGATTAAAAGAAAAACCGCCCCGTACCCGCCAAATGGTGCCAGTGGTGACGCCGGAATc > 2:3504393/1‑149 (MQ=255) aTCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAta > 2:2844779/1‑148 (MQ=255) gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCCTCGGGTGCCCGTGGTGACGCCGGACTCGATTg > 2:4598370/1‑149 (MQ=255) gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGTTGGCAAGCTATTAAATGAAAAAGCGCCGCTTAACCGCCATCTGGTGGCAGTGGTGAAGCCGGAATAGAttt > 2:2686014/1‑148 (MQ=255) gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTACTCGCCCC‑CGTTGGGAAGCTAATTAATTAAAAATCGCCCCGTAACCCCCAACAGGTGGCACTGGGGTCGCCGGAAAAGAttt > 1:201975/1‑148 (MQ=255) cTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTACTCGCCACGGGTTGGC‑AGCAATTAACAGAAAAATCGCCCCGTAACCCCCCACAGGGGGCAGTGGTGGCGCCGGCATCGATTGt > 1:999505/1‑149 (MQ=255) ttGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCGATTAACTGAAAAAGCGCCGCTTACCCGCCAACTGGTGCCCGTGGTGACGCCGGAAACGATTGTc > 2:4077002/1‑149 (MQ=255) ttGGCAGTCGGATTCCGGCGCTGCGTGAAGAATATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTc < 2:3461685/149‑1 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTCGCCAC‑GGTTGGGAAGCTATTAAATGAAAAATCGCCGCTTAACCGCCAAAAGGTGCCCGTGGTGACGCCGGAAACGATTGTCaa > 2:2771/1‑148 (MQ=255) ggCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGGTTTACTCGCCACGGGTTGGC‑AGCTATTTAATGAAAAAGCGCCGCGTTCCCGCCATCTGGTGGCCGTGGTGACGCCGGAATCCATTGTCAt > 2:2745/1‑149 (MQ=255) gTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCCCCAACAGGTGCCAGTGGGGACGCCGGAATCGATTGTCATTccc > 2:1996732/1‑148 (MQ=255) gATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACAAGCCAC‑CGGTTGCAAGCGCTTAACTGAAAAAGCGCCGCGTACCCGCCAACGGGTGGCAGGGGGGACGCCGGCAACGAATTTGATTCCGCCTg > 1:240671/1‑149 (MQ=255) cgcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTc < 2:5075414/149‑1 (MQ=255) gcTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTGCTCGCCAC‑CGTTGGCAAGCGATTAACTGAAAAAGCGCCCCGTACCCCCCCTATGGTGGCCGTGGTGACGCCGGAATCGAATGTCATTCCGCCAGCGCCCGTCg > 2:536060/1‑149 (MQ=255) tGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACAAGCCAC‑GGTTGGGAAGCAATTTACTGAAAAAGCGCCCCTTACCCGCCAACTGGTGCCACTGGTTACGCCGGAATCGATTGTCAATACGCCAGCGCCAGTCGcc > 2:2800578/1‑149 (MQ=255) cGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTACCGGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCaa < 2:4378767/149‑1 (MQ=255) tGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTGCGAGCCAC‑GGGTGGCCAGCGATTAACGGAAAAAGCGCCGCTTAACCGCCATCTGGTGGCCGTGGTTTCGCCCGAATCGATTTTCATTACCCCGGCGCCACTCGCCAAcc > 2:4805896/1‑148 (MQ=255) gAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGATATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGa < 1:4222601/149‑1 (MQ=255) aGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCCC‑GGGTGGCAAGCTATTAACTGAAAAAGCGCCGCGTAACCGCCAACTGGTGCCCGGGGTGTCGCCGGAAACGATTGTCATTACCCCAGCGCCAGTCGCCAACGaaa > 2:1827970/1‑147 (MQ=255) gACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCGGCGCCAGTCGCCAACCATAc > 2:2167273/1‑149 (MQ=255) aCTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTTACTGAAAAATCGCCGCTTAACCGCCATCTGGTTCCAGTGGTGACGCCGGAATCGATTGTCATTACGCCTGCGCCAGTCGCCAACGATACg > 2:4239244/1‑149 (MQ=255) aCTATAAACTTGGGCGTTTATGCGGTCGTGATTTACTCGCCCC‑GGTTTGGCAGCTATTAAAGGAAAAAGCGCCGCTTACCCGCCAACTGGTGCCCGGGGTGTCGCCCGAAACGATTGTCAATCCGCCTGCGCCCGTCGCCCACGATaag > 2:2322043/1‑147 (MQ=255) cTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCCC‑CGTTGGGAAGCTATTAACTGTAAAAGCGCCGCTTTACCGCCATCTGGTGGCAGTGGGGTCGCCGGAATCGATTGTCATTCCCCCGGCGCCAATCGCCCACGATAccc > 2:2247936/1‑147 (MQ=255) aaaCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGt < 1:1887732/149‑1 (MQ=255) tGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTAACCGCCAACTGGTGCCAGTGGTGACGCCGGAAACGATTGTCATTACCCCGGCGCCAGTCGCCAACGATACGCTGGTTTCCg > 2:756092/1‑149 (MQ=255) tGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCCCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCAATCCGCCAGCGCCAGTCGCCAACGAAAAGCGGGTTGCCg > 2:4720803/1‑149 (MQ=255) gCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAg < 1:4118248/149‑1 (MQ=255) tttATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGa < 1:5182023/149‑1 (MQ=255) tttATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGa < 2:3658629/149‑1 (MQ=255) tttATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAACCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGa > 2:2061498/1‑149 (MQ=255) tATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGc < 1:4772553/149‑1 (MQ=255) gCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGAc < 1:733706/149‑1 (MQ=255) gTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:2750579/1‑149 (MQ=255) gTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:2751357/1‑149 (MQ=255) gTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:3619741/1‑149 (MQ=255) tttCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg < 2:1176650/149‑1 (MQ=255) gtCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGc < 1:2661938/148‑1 (MQ=255) ccTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGa > 1:2549/1‑149 (MQ=255) ccTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGa < 2:1907260/149‑1 (MQ=255) cTCGCCAG‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 1:2646190/149‑1 (MQ=255) cTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa > 2:239490/1‑149 (MQ=255) cTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa > 1:1279856/1‑149 (MQ=255) cAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 2:4711684/1‑149 (MQ=255) cAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAcc > 1:3443168/1‑149 (MQ=255) tttGGAAAGATATTAACTTAAAAAGCGCCGCTGACCCGCCATCTGGTGCATGTGGTGACGCCGGAATCGTTTTTAATTCCGCCGGCGCCTGTCGCAAACGATACGCTGGTTGCCTAAGTGAGCGACGCTCCGCAGGCGAACGACCCGAc < 2:3978680/148‑1 (MQ=255) gTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGAAGGCGAACGACCCGAc < 2:2492202/149‑1 (MQ=255) ttGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACa > 1:1721747/1‑149 (MQ=255) | TTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACA > CP009273/4602981‑4603277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |