| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,330,426 | Δ1 bp | 100% | intergenic (‑88/+111) | adiA ← / ← melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,330,426 | 0 | T | . | 99.3% | 1693.5 / 1.1 | 341 | intergenic (‑88/+111) | adiA/melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base . (140/198); minor base A (1/1); total (142/199) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 359 total aligned reads displayed.
ACGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAA > CP009273/4330277‑4330571 | cGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAtt < 2:357841/150‑1 (MQ=255) gCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAtttt < 1:343194/150‑1 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttg < 1:1390278/150‑2 (MQ=255) gTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttga > 2:2725694/1‑148 (MQ=255) gTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttga > 1:2817960/1‑148 (MQ=255) ttACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTAGTTGCGGGCAAGTATCTACCGGCCTTATCGGGCTGTAAAGCTCGTGAAAAACAAACAtatttaa > 2:2552356/1‑148 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAat > 1:4281623/1‑150 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAat < 1:5052759/150‑1 (MQ=255) ccGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAata < 2:5257857/150‑1 (MQ=255) gACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATAtt > 1:663771/1‑150 (MQ=255) ccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAg < 1:4037340/150‑1 (MQ=255) cAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGt < 2:5087018/150‑1 (MQ=255) tgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTta < 1:1713672/150‑1 (MQ=255) tCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTtata < 1:3202290/150‑1 (MQ=255) gATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACa > 2:2140982/1‑150 (MQ=255) aTGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACaa > 2:4119760/1‑150 (MQ=255) tGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAAt < 1:5305751/150‑1 (MQ=255) ggAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATa > 1:3397933/1‑150 (MQ=255) gagaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑ATTTGAAATATTTAGTTTTATAAACAATAc > 2:5108337/1‑150 (MQ=255) agaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACg < 1:4517459/150‑1 (MQ=255) agaAACTCGCTTTCAACAATTAATACTTTCATCAGTGCTTACCCGGGTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACg < 2:1231619/150‑1 (MQ=255) cTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtg < 1:1588027/150‑1 (MQ=255) cTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtg < 2:5165347/150‑1 (MQ=255) tCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtgt < 1:3826399/150‑1 (MQ=255) cTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGat > 1:184110/1‑150 (MQ=255) cTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGAGCGTGAAAAACAAA‑AATTTTGAAATATTTAGTTTTATAAAAAATACGTTATGTGat > 2:4252032/1‑150 (MQ=255) tCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGattat < 1:3942957/150‑1 (MQ=255) caacaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGattatt < 2:1709567/150‑1 (MQ=255) aacaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGACTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAttt < 2:712940/150‑1 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAtttt < 1:470838/150‑1 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAtttt < 1:4850980/150‑1 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAtttt > 2:4401420/1‑150 (MQ=255) caaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTa > 2:1906401/1‑150 (MQ=255) aaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaa > 2:2155483/1‑150 (MQ=255) ttAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAat < 2:829878/150‑1 (MQ=255) tAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatt < 2:1123670/150‑1 (MQ=255) aaTACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatta < 1:3128205/150‑1 (MQ=255) aaTACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatta > 1:2401180/1‑150 (MQ=255) aaTACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatta > 1:2446937/1‑150 (MQ=255) aTACTTTCATCATAGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattat > 2:2845003/1‑150 (MQ=255) tACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGTCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattatt < 2:3290327/150‑1 (MQ=255) cTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAtttt < 2:5056060/150‑1 (MQ=255) catcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTCTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TCTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACt < 2:4464127/150‑1 (MQ=255) catTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCt < 1:2783223/150‑1 (MQ=255) catTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCATTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCt < 2:3034282/150‑1 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttat < 2:4932260/150‑1 (MQ=255) gCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatt > 2:2217892/1‑150 (MQ=255) cTTACCCGGTTATTAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGTGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta < 1:1870197/150‑1 (MQ=255) cTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta > 2:1548024/1‑150 (MQ=255) tACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATc > 1:302189/1‑150 (MQ=255) tACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATc < 2:1305144/150‑1 (MQ=255) aCCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCg > 2:4891358/1‑150 (MQ=255) ccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGAc < 2:404917/150‑1 (MQ=255) ccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGAc > 1:2058454/1‑150 (MQ=255) ccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGAc < 1:2974441/150‑1 (MQ=255) cGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACg < 2:609379/150‑1 (MQ=255) ggTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACgg > 1:1970074/1‑150 (MQ=255) tATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTa < 1:3454405/150‑1 (MQ=255) tATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTa > 2:4273077/1‑150 (MQ=255) aTGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTaa > 2:3412691/1‑150 (MQ=255) aTGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTaa < 2:869847/150‑1 (MQ=255) aTGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTaa < 1:5056191/150‑1 (MQ=255) aaGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACt > 2:1153432/1‑150 (MQ=255) aaGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACt < 1:5197345/150‑1 (MQ=255) aGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTa > 2:3331955/1‑150 (MQ=255) ggAATCTTGGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAt > 2:4673801/1‑150 (MQ=255) aaTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt < 2:2262904/150‑1 (MQ=255) aaTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt > 2:571582/1‑150 (MQ=255) ggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatac > 1:3321569/1‑150 (MQ=255) gCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatact < 2:184110/150‑1 (MQ=255) cAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactg < 2:2461119/150‑1 (MQ=255) cAAGTATCTTCCGGCCGTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactg < 2:3828689/150‑1 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga > 2:2679085/1‑150 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga < 1:92260/150‑1 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat > 1:4573161/1‑150 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat > 2:4364734/1‑150 (MQ=255) tCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCg < 1:4413446/150‑1 (MQ=255) tCCGGCCTTTTCTGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCt < 2:1294562/150‑1 (MQ=255) tCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCt > 1:1016331/1‑150 (MQ=255) tCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCt < 1:3764460/150‑1 (MQ=255) cGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCttt < 1:3474096/150‑1 (MQ=255) ggCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGATTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTa > 2:1987440/1‑150 (MQ=255) ccTTTTCGGGCTGTAAAGCGCGTGAAAAACAAA‑AATTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGc < 2:3163117/150‑1 (MQ=255) ttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg < 1:2155483/150‑1 (MQ=255) gggCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGaaa > 1:305173/1‑150 (MQ=255) gCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACg < 2:2613945/150‑1 (MQ=255) ntGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGt > 1:3626815/2‑150 (MQ=255) aaaGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTgg > 1:4940875/1‑150 (MQ=255) aaGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggc < 2:1374325/150‑1 (MQ=255) tGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTg > 2:1011808/1‑150 (MQ=255) aaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg > 1:1070962/1‑150 (MQ=255) aaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGAAGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACTTCTGGCGGCGCTGTTg > 2:1379874/1‑150 (MQ=255) aaacaaacA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTgg > 1:1148472/1‑150 (MQ=255) aacaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGc > 2:4983735/1‑150 (MQ=255) aacaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGc > 2:3760944/1‑150 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCt > 1:26837/1‑150 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCt > 1:2543589/1‑150 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCt > 1:1172207/1‑150 (MQ=255) caaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTa < 2:4598374/150‑1 (MQ=255) aaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTaa > 1:2124394/1‑150 (MQ=255) | ACGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAA > CP009273/4330277‑4330571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |