New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 1635219 =0 (0.000)374 (1.250) 164/274 NT 100% intergenic (‑377/+377) essQ/cspB Qin prophage; putative S lysis protein/Qin prophage; cold shock protein
?CP009273 = 2063752 NA (NA)noncoding (1/1331 nt) IS2 repeat region

Only 100 of 745 total aligned reads displayed.

ACGTAAAAACTCAAAATCACGCCGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCAT  >  CP009273/1635070‑1635368
                                                                                                                                                     |                                                                                                                                                     
cgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaa                                                                                                                                                       <  2:106141‑M1/1‑1 (MQ=255)
cgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaa                                                                                                                                                       <  1:3998310‑M1/1‑1 (MQ=255)
cgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaa                                                                                                                                                       <  2:4660111‑M1/1‑1 (MQ=255)
  gTAAAAACTCAAAATCACGCCGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAg                                                                                                                                                     <  2:4066620/150‑1 (MQ=255)
     aaaaCTCAAAATCACGCCGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTt                                                                                                                                                  >  2:708050‑M1/1‑149 (MQ=255)
        tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAg                                                                                                                                               >  1:2172482‑M1/142‑150 (MQ=255)
         cTCAAAATCACGCCGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggat                                                                                                                                              <  2:3542738‑M1/150‑6 (MQ=255)
           tgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCt                                                                                                                                            >  2:3874895‑M1/139‑150 (MQ=255)
            gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCtg                                                                                                                                           <  2:5125937‑M1/13‑1 (MQ=255)
            gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCtg                                                                                                                                           <  2:2053693‑M1/13‑1 (MQ=255)
             aaaTCACGCCGTTATTATCTCGTTATATGTTCCTGCCCTAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTTCAAAAAGGTGCCCTTTTGATCTGCCCTCATTGAAACTAAGTATTCCAGACAAATCTTAAAGCTtggttttgc                                                                                                                                          <  1:5256007‑M1/150‑10 (MQ=255)
                    gCCGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCACCAAAGTATTCCAGACACATCTTAAAGCTtggatttgcccctata                                                                                                                                   >  2:628027‑M1/1‑134 (MQ=255)
                      cGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatt                                                                                                                                 >  1:2374153‑M1/1‑132 (MQ=255)
                       gTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatattt                                                                                                                                <  2:3958388‑M1/150‑20 (MQ=255)
                        tAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttc                                                                                                                               >  1:1619261‑M1/1‑130 (MQ=255)
                        gtctgcgtttctccggccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTttatt                                                                                                                               <  1:1681456‑M1/25‑1 (MQ=255)
                        gtctgcgtttctccggccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTttatt                                                                                                                               <  2:3087631‑M1/25‑1 (MQ=255)
                        gtctgcgtttctccggccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTttatt                                                                                                                               >  1:318368‑M1/126‑150 (MQ=255)
                         tctgcgtttctccggccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTttatta                                                                                                                              >  2:2517096‑M1/125‑150 (MQ=255)
                         aaTTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttcc                                                                                                                              <  2:4931776‑M1/150‑22 (MQ=255)
                          aTTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttcca                                                                                                                             <  1:1004960‑M1/150‑23 (MQ=255)
                           ttATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGATtggatttgcccctatatttccag                                                                                                                            >  2:1659983‑M1/1‑127 (MQ=255)
                               ctcGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacat                                                                                                                        <  1:1775033‑M1/150‑28 (MQ=255)
                               ctcGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacat                                                                                                                        <  1:4183250‑M1/150‑28 (MQ=255)
                                 cGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatct                                                                                                                      <  2:4833157‑M1/150‑30 (MQ=255)
                                    tAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgtt                                                                                                                   >  2:1500774‑M1/1‑118 (MQ=255)
                                    ccggccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTAt                                                                                                                   >  2:5234188‑M1/114‑150 (MQ=255)
                                    ccggccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTAt                                                                                                                   >  2:793018‑M1/114‑150 (MQ=255)
                                     aaaTGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgtta                                                                                                                  >  1:3414864‑M1/1‑117 (MQ=255)
                                       gccctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTAtttt                                                                                                                >  1:554003‑M1/111‑150 (MQ=255)
                                         cctaagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTAtttttt                                                                                                              <  2:2860354‑M1/42‑1 (MQ=255)
                                            ccTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcactta                                                                                                           <  1:1347711‑M1/150‑41 (MQ=255)
                                            aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTtata                                                                                                           >  1:2652086‑M1/106‑150 (MQ=255)
                                            aagacataaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTtata                                                                                                           >  1:1453729‑M1/106‑150 (MQ=255)
                                             agacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTatat                                                                                                          <  1:4812381‑M1/46‑1 (MQ=255)
                                               gCCCAAACTGCACACAAGAGTCATAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                        <  2:1975425‑M1/150‑44 (MQ=255)
                                               acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATAttt                                                                                                        <  2:1082395‑M1/48‑1 (MQ=255)
                                                   aaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCGGATTGATTTTATTAGTAACTAGTATTTTTTATATTTtaat                                                                                                    <  1:4602446‑M1/52‑1 (MQ=255)
                                                   aaaCTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                    >  2:86891‑M1/1‑103 (MQ=255)
                                                   aaaCTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                    >  2:1347729‑M1/1‑103 (MQ=255)
                                                     atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTtaataa                                                                                                  >  1:2942914‑M1/97‑150 (MQ=255)
                                                      cTGCACCCAAGAGCCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattaca                                                                                                 <  2:2206005‑M1/150‑51 (MQ=255)
                                                         tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAatata                                                                                              <  1:652426‑M1/58‑1 (MQ=255)
                                                          ctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAatatat                                                                                             >  1:2098763‑M1/92‑150 (MQ=255)
                                                           tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATAtt                                                                                            >  1:5301507‑M1/91‑150 (MQ=255)
                                                                tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatagtggttgtctggagattcagggggccagtctaCAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAg                                                                                       >  1:3720841‑M1/86‑150 (MQ=255)
                                                                 ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGc                                                                                      >  2:3407896‑M1/85‑150 (MQ=255)
                                                                 agTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc                                                                                      <  1:999229‑M1/150‑62 (MQ=255)
                                                                 agTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttcaagacatatgttatcacttaacccattacaatcccgctgcc                                                                                      >  2:4867792‑M1/1‑89 (MQ=255)
                                                                  gTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg                                                                                     >  1:1741772‑M1/1‑88 (MQ=255)
                                                                      gactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGAAGata                                                                                 <  1:5028978‑M1/71‑1 (MQ=255)
                                                                         tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGataata                                                                              <  1:3016288‑M1/74‑1 (MQ=255)
                                                                         cacaGTTTTTCAGGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatat                                                                              <  2:2686395‑M1/150‑70 (MQ=255)
                                                                            tctaaaaaatagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATaaaa                                                                           >  1:866586‑M1/74‑150 (MQ=255)
                                                                            aGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcc                                                                           <  1:1585630‑M1/150‑73 (MQ=255)
                                                                               aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAc                                                                        <  1:1543501‑M1/80‑1 (MQ=255)
                                                                               aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAc                                                                        <  1:230777‑M1/80‑1 (MQ=255)
                                                                                 ttCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacacattacaagcccgctgccgcagatattcccgtgg                                                                      >  2:4330584‑M1/1‑73 (MQ=255)
                                                                                  aactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCg                                                                     >  1:4351249‑M1/68‑150 (MQ=255)
                                                                                   actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGc                                                                    <  1:1268806‑M1/84‑1 (MQ=255)
                                                                                   actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGc                                                                    <  1:3935723‑M1/84‑1 (MQ=255)
                                                                                     tagtattaagactatcacttatttaagtgattttggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCt                                                                  >  1:424209‑M1/65‑150 (MQ=255)
                                                                                     tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCt                                                                  <  2:2312796‑M1/86‑1 (MQ=255)
                                                                                         attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGc                                                              <  1:3824636‑M1/90‑1 (MQ=255)
                                                                                          aCAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgata                                                             <  1:3269161‑M1/150‑87 (MQ=255)
                                                                                           cAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataa                                                            <  2:3451176‑M1/150‑88 (MQ=255)
                                                                                            aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCggg                                                           >  1:5089875‑M1/58‑150 (MQ=255)
                                                                                             aaaaGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                          >  2:4553412‑M1/1‑61 (MQ=255)
                                                                                               actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGttt                                                        >  1:1964929‑M1/55‑150 (MQ=255)
                                                                                                  atcacttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTgag                                                     >  1:1068184‑M1/52‑150 (MQ=255)
                                                                                                    cacttatttaagtgctattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTGTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGAt                                                   >  2:5082289‑M1/50‑150 (MQ=255)
                                                                                                       ttatttaagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATtgt                                                >  1:3468155‑M1/47‑150 (MQ=255)
                                                                                                       cTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcacta                                                <  2:4374087‑M1/150‑100 (MQ=255)
                                                                                                         tttGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg                                              <  2:3621610‑M1/150‑102 (MQ=255)
                                                                                                           tGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg                                            >  2:4486133‑M1/1‑47 (MQ=255)
                                                                                                            gATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg                                           >  1:1824250‑M1/1‑46 (MQ=255)
                                                                                                             aagtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                          <  1:4707506‑M1/110‑1 (MQ=255)
                                                                                                              tCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggat                                         <  1:789120‑M1/150‑107 (MQ=255)
                                                                                                               gtgatattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCttt                                        >  2:1715495‑M1/39‑150 (MQ=255)
                                                                                                                  cccTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcca                                     <  2:3234288‑M1/150‑111 (MQ=255)
                                                                                                                   tattggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTtgt                                    <  1:4417952‑M1/116‑1 (MQ=255)
                                                                                                                     tCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc                                  >  2:1891853‑M1/1‑37 (MQ=255)
                                                                                                                     tCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc                                  >  1:280055‑M1/1‑37 (MQ=255)
                                                                                                                      tggttgtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTggg                                 <  2:3352526‑M1/119‑1 (MQ=255)
                                                                                                                       ggttgtctggagattcagggggccagtctaAATCTGTAGCCTGATTGATTTTATTAGTAAAAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACACGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGa                                <  2:941502‑M1/120‑1 (MQ=255)
                                                                                                                       aTTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt                                >  1:2528324‑M1/1‑35 (MQ=255)
                                                                                                                       aTTGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt                                >  2:2409011‑M1/1‑35 (MQ=255)
                                                                                                                         tGCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta                              <  2:3720166‑M1/150‑118 (MQ=255)
                                                                                                                          gCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttat                             <  1:4764825‑M1/150‑119 (MQ=255)
                                                                                                                          gCAACAAAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttat                             <  2:3009359‑M1/150‑119 (MQ=255)
                                                                                                                           gtctggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGTGTCa                            <  1:4933286‑M1/124‑1 (MQ=255)
                                                                                                                           caacaaAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgtcgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata                            >  1:1194565‑M1/1‑31 (MQ=255)
                                                                                                                             acaaAGTATTCCAGACAAATCATAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat                          <  2:4207883‑M1/150‑122 (MQ=255)
                                                                                                                              tggagattcagggggccagtctaAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATcc                         >  1:4096775‑M1/24‑150 (MQ=255)
                                                                                                                              caaAGTATTCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatg                         >  2:1584951‑M1/1‑28 (MQ=255)
                                                                                                                                     ttCCAGACAAATCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac                  <  1:4481445‑M1/150‑130 (MQ=255)
                                                                                                                                              aaTCTTAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca         >  2:1227597‑M1/1‑12 (MQ=255)
                                                                                                                                                  ttAAAGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggt     >  1:3652771‑M1/1‑8 (MQ=255)
                                                                                                                                                    aaaGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttc   >  2:4135867‑M1/1‑6 (MQ=255)
                                                                                                                                                     aaGCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttct  <  2:5020981‑M1/150‑146 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACGTAAAAACTCAAAATCACGCCGTAATTATCTCGTTAAATGTTCCTGCCCAAACTGCACCCAAGAGTCAGAACACAGTTTTTCAAGAGTACAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCAT  >  CP009273/1635070‑1635368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.