| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,962,962 | T→A | 100% | intergenic (‑626/‑59) | rppH ← / → mutH | RNA pyrophosphohydrolase/methyl‑directed mismatch repair protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,962,962 | 0 | T | A | 99.0% | 1081.6 / ‑1.2 | 326 | intergenic (‑626/‑59) | rppH/mutH | RNA pyrophosphohydrolase/methyl‑directed mismatch repair protein |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base A (176/146); total (177/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 326 total aligned reads displayed.
CAGCTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGTTACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACATTGG > CP009273/2962816‑2963108 | aGCTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGTTaca > 2:4396894/1‑150 (MQ=255) aGCTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATaca > 1:4174397/1‑150 (MQ=255) aGCTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATaca < 1:2397580/150‑1 (MQ=255) gCTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATacac < 2:3161967/150‑1 (MQ=255) cTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACt < 2:4593214/150‑1 (MQ=255) tttCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTg < 2:4802868/150‑1 (MQ=255) ggATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAatat < 2:5233918/150‑1 (MQ=255) gATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATAtt > 2:4955455/1‑150 (MQ=255) aaCATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCgg > 1:1165162/1‑150 (MQ=255) cATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGca < 2:1231745/150‑1 (MQ=255) gtgtAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATa < 2:2766295/150‑1 (MQ=255) gtgtAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATa > 2:1719679/1‑150 (MQ=255) gtgtAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATa > 2:1707419/1‑150 (MQ=255) tgtAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATaa > 1:2404751/1‑150 (MQ=255) tgtAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACAGaa > 2:4100030/1‑150 (MQ=255) aaGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTg > 1:866195/1‑150 (MQ=255) aaGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTg > 1:2978774/1‑150 (MQ=255) aGATCCTGTTTGTTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGc > 1:2767723/1‑150 (MQ=255) aTCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCTAATATTCGGCACATAATTGCtg > 1:1346706/1‑150 (MQ=255) aTCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTTCtg > 1:1801509/1‑150 (MQ=255) aTCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCtg > 1:2453282/1‑150 (MQ=255) aTCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCtg > 2:3951533/1‑150 (MQ=255) tCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCtgt < 1:3670539/150‑1 (MQ=255) cTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCtgttt < 1:3308629/150‑1 (MQ=255) tATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTTAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGtttt < 1:3642893/150‑1 (MQ=255) tATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGtttt < 2:5237229/150‑1 (MQ=255) ttttCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGtttttt < 1:874214/150‑1 (MQ=255) tttCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTa < 2:4168793/150‑1 (MQ=255) tttCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGGGGAAAAAGAGAAACTGCGAATATTCGGCACATAATTGCTGTTTGttttttt > 1:4440623/1‑149 (MQ=255) tCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAAt < 1:3537677/150‑1 (MQ=255) cAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCCATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATACGGCACAAAATTGCGGTTTGTTTTTTAATc > 1:145797/1‑150 (MQ=255) cAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATc > 1:3394838/1‑150 (MQ=255) gTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCaa < 1:702717/150‑1 (MQ=255) tGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGTTACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAg < 1:983151/150‑1 (MQ=255) gACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAgg < 2:4003874/150‑1 (MQ=255) gACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAgg > 2:318361/1‑150 (MQ=255) cAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTAt < 2:3236992/150‑1 (MQ=255) cAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTAt > 1:1242274/1‑150 (MQ=255) aGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATc > 2:690016/1‑150 (MQ=255) gATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCa > 1:2113361/1‑150 (MQ=255) aTTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCAt > 2:2457058/1‑150 (MQ=255) aTTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCAt < 2:1490099/150‑1 (MQ=255) tttGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATg < 1:2622086/150‑1 (MQ=255) tttGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATg < 2:5111967/150‑1 (MQ=255) gAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACAt > 1:1036987/1‑150 (MQ=255) aaaaCCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATg < 1:1707419/150‑1 (MQ=255) aaaaCCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATg > 1:520974/1‑150 (MQ=255) aaaaCCCGTTGCAGTGTTGCGCAACTCGATTAACTGCAAACTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGAACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATg < 1:3071874/150‑1 (MQ=255) aaCCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTc > 2:909372/1‑150 (MQ=255) gCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTc > 1:4766756/1‑150 (MQ=255) gCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTc < 2:1636597/150‑1 (MQ=255) tgtTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATACTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGccc < 1:4143356/150‑1 (MQ=255) gtTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCa > 1:4016799/1‑150 (MQ=255) ggtGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCTTGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCa > 1:284751/3‑150 (MQ=255) cAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGctc > 1:2150428/1‑150 (MQ=255) cAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGctc < 1:4875840/150‑1 (MQ=255) aaCTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGctct > 2:770488/1‑150 (MQ=255) cGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTctcc < 1:1143067/150‑1 (MQ=255) gATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTctcct < 1:3898408/150‑1 (MQ=255) tACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTccc > 2:817844/1‑150 (MQ=255) aCCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCg < 1:1629080/150‑1 (MQ=255) gCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAAc < 1:270402/150‑1 (MQ=255) cAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACt > 2:1030813/1‑150 (MQ=255) cAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACt < 2:2311703/150‑1 (MQ=255) aCCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTga > 1:1302356/1‑150 (MQ=255) ccTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTgaa > 2:192383/1‑150 (MQ=255) cTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTgaag > 2:5327111/1‑150 (MQ=255) aaGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAg < 1:2308575/150‑1 (MQ=255) gCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAgtt < 2:2554747/150‑1 (MQ=255) cAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAgttg > 2:3766852/1‑150 (MQ=255) aaTATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAgttgt > 2:4499495/1‑150 (MQ=255) atatAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGTTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCACGAAAATGAAGAACAgttgtt > 1:274359/1‑150 (MQ=255) atatAAATCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACAGAATTGCTGTTTGTTTTTTAATCAATGTATCATTAAAAGTCCCAACCACGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAgtggta > 2:4973389/1‑149 (MQ=255) ataAAACAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAg > 1:1875421/1‑150 (MQ=255) aaaTCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAgcg > 2:1867876/1‑150 (MQ=255) aTCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCa > 1:224361/1‑150 (MQ=255) aTCAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCa > 2:3515180/1‑150 (MQ=255) cAGAGAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAg < 2:5069733/150‑1 (MQ=255) agagAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGc > 1:374570/1‑150 (MQ=255) agagAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGc > 2:3380736/1‑150 (MQ=255) agagAATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGc > 2:2137917/1‑150 (MQ=255) agaATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGcac > 2:2092948/1‑150 (MQ=255) gaATTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGcaca > 1:2500482/1‑150 (MQ=255) aaTTGAACAACGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAg > 1:322367/1‑150 (MQ=255) aacaacGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACt > 1:632069/1‑150 (MQ=255) aacaacGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACt > 1:1978179/1‑150 (MQ=255) aacaacGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACt > 2:4723261/1‑150 (MQ=255) aacGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTGTc > 1:4544204/1‑150 (MQ=255) cGCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTg < 2:2001389/150‑1 (MQ=255) gCATGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTgg > 1:2954348/1‑150 (MQ=255) aTGTGGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGtt > 2:2878965/1‑150 (MQ=255) tgGAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTtata > 2:2107324/1‑150 (MQ=255) ggAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATAc < 2:1081448/150‑1 (MQ=255) ggAAAAAGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATAc > 1:5074401/1‑150 (MQ=255) aaaaaGATACACTGCGAATATTTGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACAt > 2:3632659/1‑150 (MQ=255) aaaaaGATACACTGCGAAGATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACAt < 2:2978774/150‑1 (MQ=255) aaaaGATACACTGCTAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACAtt < 2:1346706/150‑1 (MQ=255) aaaaGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACAtt > 2:2663156/1‑150 (MQ=255) aaaGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACATTg > 1:4305165/1‑150 (MQ=255) aaaGATACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACATTg > 1:5327223/1‑150 (MQ=255) | CAGCTTTCTGTGGATAACATGGTGTAAGATCCTGTTTATTTTCAGTGACCAGATTTGGAAAACCCGTTGCAGTGTTGCGCAACTCGATTACCGGCAACCTAAAAAGCAATATAAATCAGAGAATTGAACAACGCATGTGGAAAAAGTTACACTGCGAATATTCGGCACATAATTGCTGTTTGTTTTTTAATCAAGGTATCATGACATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACATTGG > CP009273/2962816‑2963108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |