| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,077,302 | C→A | 100% | D657Y (GAT→TAT) | speA ← | biosynthetic arginine decarboxylase, PLP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,077,302 | 0 | C | A | 99.1% | 1082.1 / ‑1.3 | 337 | D657Y (GAT→TAT) | speA | biosynthetic arginine decarboxylase, PLP‑binding |
| Reads supporting (aligned to +/- strand): ref base C (4/0); new base A (150/183); total (154/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.27e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 337 total aligned reads displayed.
TGGATGGACTCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATCTTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCATGTC > CP009273/3077156‑3077449 | ggatggaCTCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCa > 2:1246358/1‑150 (MQ=255) atggaCTCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAg > 1:4941370/1‑150 (MQ=255) atggaCTCCTATTACAAAGTCGAAATAAAAAAAACCTACCGCGTCGATACGCCCGACGAGGAAGGCTAGGATTTTTAACAAAAAATATTGGCGGAATATAACCGCTAAATTAAACCGAATCAAGTAACACACGACTTACTAATATTCAAg > 1:1847212/1‑150 (MQ=255) tggaCTCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGa > 1:2771869/1‑150 (MQ=255) ggaCTCCTATTACAAAGTCGATATAAAAAAACCCGTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGAt < 1:1504717/150‑1 (MQ=255) cTCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAg > 2:200204/1‑150 (MQ=255) tCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGt > 2:1356552/1‑150 (MQ=255) cTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGtat > 2:4677854/1‑150 (MQ=255) tACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACTATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAAcc < 1:3420362/150‑1 (MQ=255) aCAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCg > 1:576347/1‑150 (MQ=255) aCAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCg < 1:3289317/150‑1 (MQ=255) aaaGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTa < 1:4721335/150‑1 (MQ=255) aaGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTAc < 2:4755501/150‑1 (MQ=255) aGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACa > 2:2528254/1‑150 (MQ=255) cGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATCTTCAAGATAAGTATAACCGTACAAAc > 1:1271258/1‑150 (MQ=255) gATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAGAcc > 1:203377/1‑150 (MQ=255) atatAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCt < 1:964849/150‑1 (MQ=255) ataAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGc > 2:1390190/1‑150 (MQ=255) aaaaaaaCCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCGAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCt > 2:321149/1‑150 (MQ=255) aaaaaaCCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTc > 1:4336441/1‑150 (MQ=255) aaaaaaCCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTc < 2:2964991/150‑1 (MQ=255) aaaaaaCCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTc < 2:280801/150‑1 (MQ=255) aaaaaaCCCGTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTc < 2:3366741/150‑1 (MQ=255) aaaaCCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGa > 2:284045/1‑150 (MQ=255) aCCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATCTTCAAGATAAGTATAACCGTACAAACCTGCCTCGAAct > 2:3969759/1‑150 (MQ=255) ttCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTc < 1:2795512/150‑1 (MQ=255) tCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCa < 2:2481864/150‑1 (MQ=255) cgtcgtTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCAGCCTCGAACTCTTCAAGGa > 2:4137263/1‑150 (MQ=255) tcgtTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCAACGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAAACTGCCTCGAACTCTTCAAGGAAc < 2:643683/150‑1 (MQ=255) gtTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACtg > 2:3435145/1‑150 (MQ=255) tAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACtgtt > 1:4508187/1‑150 (MQ=255) tAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACtgtt < 2:5270623/150‑1 (MQ=255) aGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACtgttg > 1:3301161/1‑150 (MQ=255) aGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACtgttg > 1:1018626/1‑150 (MQ=255) cgacgaGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCa < 2:1672760/150‑1 (MQ=255) gaGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTc > 1:4990566/1‑150 (MQ=255) aGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCa > 1:1783001/1‑150 (MQ=255) ggAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAg > 1:1295484/1‑150 (MQ=255) aGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCAt > 2:1913751/1‑150 (MQ=255) gggTTGGATTAGTCACAATAAATTGTGGCGGATTATCACCGCGAAAGTAATCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATc > 2:1120485/1‑150 (MQ=255) ggATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGAt > 2:4459826/1‑150 (MQ=255) gATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATc < 2:2350085/150‑1 (MQ=255) aTTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCg < 2:226147/150‑1 (MQ=255) aTTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCg > 2:747164/1‑150 (MQ=255) aTTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCg < 2:1073108/150‑1 (MQ=255) aTTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCg > 2:1608505/1‑150 (MQ=255) aTAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCa > 1:2319215/1‑150 (MQ=255) aaaTTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACt < 2:2739871/150‑1 (MQ=255) aaTTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACtt < 1:840350/150‑1 (MQ=255) gtgGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATc < 1:69248/150‑1 (MQ=255) gtgGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAAATCGGTTTTCTTCACTTGATc < 2:5071101/150‑1 (MQ=255) gtgGCGGATTATCACCGCTAAAGTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATc < 2:3453156/150‑1 (MQ=255) ggCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATcgc < 1:3741910/150‑1 (MQ=255) gCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATcgcg > 2:4214072/1‑150 (MQ=255) gATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGaa < 2:2171052/150‑1 (MQ=255) gATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGaa < 2:574482/150‑1 (MQ=255) aTTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAAc > 1:4916303/1‑150 (MQ=255) aTTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAAc > 2:5178432/1‑150 (MQ=255) ttATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACt < 1:2612815/150‑1 (MQ=255) tATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTg < 1:747164/150‑1 (MQ=255) tATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTg < 1:5287961/150‑1 (MQ=255) tATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTg > 1:5135769/1‑150 (MQ=255) tCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTggg > 2:4078493/1‑150 (MQ=255) ccGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTa < 2:1446366/150‑1 (MQ=255) cgcgAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGATGCAGTTCAGCATCAAGATCGGAATTCTTCACTTGATCGCGGAACTGGGTTaa > 2:1550536/1‑150 (MQ=255) cGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTaa < 2:1658558/150‑1 (MQ=255) aaaTTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGc > 2:4334389/1‑150 (MQ=255) aaTTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCg < 1:986233/150‑1 (MQ=255) aaTTAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAAACGTACAAACCTGCCTCGAACTCTTCAAGGAACAGGGGAGGCAGTTCAGCATCAAGATCGGTGTACTTCACTTGATAGCGTAACTGTGATAACACCg > 1:2418307/1‑150 (MQ=255) tAAGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGttt < 1:2290693/150‑1 (MQ=255) aaGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGACCTGGGTTAACAGCGtttt > 2:3545093/1‑150 (MQ=255) aGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTc < 2:1755050/150‑1 (MQ=255) aGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTc < 1:615896/150‑1 (MQ=255) aGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTc < 1:398604/150‑1 (MQ=255) aGCGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTc > 1:1056623/1‑150 (MQ=255) cGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCgg > 2:4301155/1‑150 (MQ=255) cGGATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCgg > 1:2145964/1‑150 (MQ=255) gATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGAt > 2:955095/1‑150 (MQ=255) gATTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGAt < 2:1301859/150‑1 (MQ=255) aTTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATc < 1:1623432/150‑1 (MQ=255) aTTCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATc < 2:1269655/150‑1 (MQ=255) ttCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCg < 2:3300701/150‑1 (MQ=255) tCAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGa < 1:4459826/150‑1 (MQ=255) cAAGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAg < 1:2857776/150‑1 (MQ=255) aaGTAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGc < 1:1083597/150‑1 (MQ=255) tAACACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGt < 1:1245794/150‑1 (MQ=255) aaCACAGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTa < 2:3728353/150‑1 (MQ=255) cacaGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACa < 2:4243484/150‑1 (MQ=255) aGGACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACatat < 1:4151948/150‑1 (MQ=255) ggACTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATAtt > 2:4903362/1‑150 (MQ=255) cTTACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTgca < 1:3809126/150‑1 (MQ=255) tACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTgcagc < 2:4582333/150‑1 (MQ=255) tACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTgcagc < 1:3563964/150‑1 (MQ=255) tACTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTgcagc < 1:1445477/150‑1 (MQ=255) aCTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAAATGGGTTAACAGCGTTTTCTGATCGAGCTGTACATATTgcagca > 2:4982203/1‑150 (MQ=255) cTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCAt > 1:3084210/1‑150 (MQ=255) cTCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCAt < 1:2161694/150‑1 (MQ=255) tCATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCATg < 2:812716/150‑1 (MQ=255) cATATTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCATGt > 1:3958973/1‑150 (MQ=255) aTCTTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCATGTc > 2:208948/1‑150 (MQ=255) | TGGATGGACTCCTATTACAAAGTCGATATAAAAAAACCCTTCCGCGTCGTTAGGCCCGACGAGGAAGGGTTGGATTTGTCACAATAAATTGTGGCGGATTATCACCGCTAAATTAAGCGGATTCAAGTAACACAGGACTTACTCATCTTCAAGATAAGTATAACCGTACAAACCTGCCTCGAACTCTTCAAGGAACTGTTGTTGCAGTTCAGCATCAAGATCGGTTTTCTTCACTTGATCGCGGAACTGGGTTAACAGCGTTTTCGGATCGAGCTGTACATATTGCAGCATGTC > CP009273/3077156‑3077449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |