| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,110,751 | C→A | 100% | R574L (CGT→CTT) | yghJ ← | DUF4092 family putative lipoprotein peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,110,751 | 0 | C | A | 100.0% | 868.1 / ‑6.7 | 278 | R574L (CGT→CTT) | yghJ | DUF4092 family putative lipoprotein peptidase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (133/144); total (133/145) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 281 total aligned reads displayed.
CTGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAACGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTAC > CP009273/3110604‑3110897 | cTGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCAACATTATTAAAGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGc > 1:4800688/1‑150 (MQ=255) tttCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑t < 2:3603381/150‑1 (MQ=255) tttCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑t < 1:1803332/150‑1 (MQ=255) ttCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑Tg < 2:241533/150‑1 (MQ=255) tCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGc > 1:3689126/1‑150 (MQ=255) cgcgTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCt > 1:370100/1‑150 (MQ=255) cgcgTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCt > 2:3271376/1‑150 (MQ=255) gcgTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCtg < 1:4686071/150‑1 (MQ=255) gcgTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCtg < 2:1178772/150‑1 (MQ=255) cgTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCtgt > 2:2924397/1‑150 (MQ=255) tCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCtgttg < 2:2014932/150‑1 (MQ=255) cGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTa > 2:3395816/1‑150 (MQ=255) cTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAgtg > 2:4334370/1‑150 (MQ=255) cTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAgtg < 1:528559/150‑1 (MQ=255) cTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAgtg < 2:1088792/150‑1 (MQ=255) ccATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTgg < 2:3023458/150‑1 (MQ=255) cATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTggg > 1:1662605/1‑150 (MQ=255) tttATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCGTCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGtt > 2:5268211/1‑150 (MQ=255) ttATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTa > 2:5035656/1‑150 (MQ=255) ttATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTa < 1:50712/150‑1 (MQ=255) tATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTAc < 2:917637/150‑1 (MQ=255) aTCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTAcc < 1:1322322/150‑1 (MQ=255) cgtcgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGa < 1:3072098/150‑1 (MQ=255) gtcgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGAt < 2:86386/150‑1 (MQ=255) gtcgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGAt < 2:3813503/150‑1 (MQ=255) cgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATaa > 1:1201046/1‑150 (MQ=255) cgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATaa > 1:4663324/1‑150 (MQ=255) aCAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTTACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCa > 2:2272876/1‑150 (MQ=255) aCAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCa > 1:1276559/1‑150 (MQ=255) aTAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAg > 2:3880308/1‑150 (MQ=255) aGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGtt < 1:210163/150‑1 (MQ=255) aGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGtt < 2:2880224/150‑1 (MQ=255) gcgaAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACGGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGttt < 1:2269701/150‑1 (MQ=255) cgcAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTg < 1:3261884/150‑1 (MQ=255) cagcaCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCGGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGcc > 2:1549352/1‑150 (MQ=255) agcaCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGccc > 1:2991808/1‑150 (MQ=255) gcaCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCt > 2:1203356/1‑150 (MQ=255) caCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTc < 1:1446040/150‑1 (MQ=255) caCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTc < 2:3462148/150‑1 (MQ=255) caCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTc < 1:4540173/150‑1 (MQ=255) gTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCCAAA‑TGCGGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCAcc > 2:4178508/1‑150 (MQ=255) ctcCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGAc < 1:3632691/150‑1 (MQ=255) ctcCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGAc > 1:4383115/1‑150 (MQ=255) ctcCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACAGCCCATCTTTATTAACGCCCCCCTTACAGCTGTAACCGTTCGGGCAAAGCAAAA‑ATATGTTTTATTGTGGGTTAACGATAAACAACACTTTTCCCACACCGAc > 1:4514797/1‑150 (MQ=255) ccATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACtt > 1:3117626/1‑150 (MQ=255) cATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTg < 2:4591303/150‑1 (MQ=255) aTGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGc > 1:721242/1‑150 (MQ=255) aaGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTTCCCTCACCGACTTGcccc > 1:2918685/1‑150 (MQ=255) aGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCa < 2:1686068/150‑1 (MQ=255) gTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAg > 2:1857042/1‑150 (MQ=255) cATGTCATCCGGGTCGCTGTTGATCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAAACGTTCTGGCAAAGCAAAA‑TGCTGTTGTATTGTGGGTTAACGATAACCATCAGTTTGCCCTAACCGACATGACCCAGCCAAAt > 1:197204/1‑150 (MQ=255) cATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAAt < 1:280541/150‑1 (MQ=255) cATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAAt > 1:5097947/1‑150 (MQ=255) aTGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAACA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATa < 2:4460481/150‑1 (MQ=255) aTGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATa > 2:3997978/1‑150 (MQ=255) aTGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATa < 2:247789/150‑1 (MQ=255) aTGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATa > 2:4631442/1‑150 (MQ=255) tGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATaa < 2:57463/150‑1 (MQ=255) tCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAAc < 2:1315135/150‑1 (MQ=255) tCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAAc < 2:2688781/150‑1 (MQ=255) cATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACg < 1:682235/150‑1 (MQ=255) gggTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAgg < 2:1051922/150‑1 (MQ=255) gggTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACATGCCCCAGCGAAATAAACGGCAgg > 1:1513740/1‑150 (MQ=255) gggTCGCTGTTGAGCGAACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTTGTGTGGGTTACCGATAACCATCTGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAgg < 1:1131407/150‑1 (MQ=255) gCTGTTGAGCGTACACTGCCCATATTTATTACCGCCCCCGTTCCAGCTGTAACCGTTCGGGAAAAGCAAAA‑TGCTGTTGTTGTGTGGGTTACCGATAACCATAAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTaaa < 1:2680452/150‑1 (MQ=255) cTGTTGAGCGTACACTGCCCATCTTTATTACCGCCCCCGTTCCAGCTGTACCCGTTCGGGCAAAGCAAAA‑GGCTGTTGTTGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAg < 2:953798/150‑1 (MQ=255) tGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCCCCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAgg < 1:855833/150‑1 (MQ=255) gTTGAGCTTACACTGCCCATCTTTATTACCGCCCCCGTTCCAGCTGTAACCGTTCGGGAAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGt < 2:4946951/150‑1 (MQ=255) ttGAGCGTACCCTGCCCATATTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTg < 1:5200243/150‑1 (MQ=255) tGAGCGTACACTGCCCATCTTTTTTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTgg < 2:2615403/150‑1 (MQ=255) gAGCGTACACTGCCCATCTTTATTACCGCCCCCTTTCCAGCTGTAACCGTTCGGGAAAAGAAAAA‑TGCTGTTGTTGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGc < 1:2561684/150‑1 (MQ=255) gCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCgg > 1:4029652/1‑150 (MQ=255) gTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTa > 1:968635/1‑150 (MQ=255) aacacTGCCCATATTTATTAACGCCCCCGTTCCAGATTTAACCGTTCGGGCAAAGCAAAA‑TGCTTTTGTTGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATACACGGCAGGTTAAAGGTGGCGGTAt < 1:387768/149‑1 (MQ=255) acTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATcgc > 1:2512619/1‑150 (MQ=255) cTGCCCATCTTCATTACCGCCCCCGGTCCAGCTGCAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATACCCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATcgcg < 1:220771/150‑1 (MQ=255) tGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTACCCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATcgcgc < 2:1740660/150‑1 (MQ=255) cccATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGt > 2:1402336/1‑150 (MQ=255) cccATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGAAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGt > 1:4104155/1‑150 (MQ=255) ccATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTa > 1:3791707/1‑150 (MQ=255) aatatttATCACCGCCCCCGTTCCAGCTGTAACCGTTCGGGAAAAGAAAAA‑TGTTGTTGTTGTGTGGGTTACCTATAACCATCTGTTTGCCCTCCCCGACTGGCCCCCGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTaa < 1:2344271/146‑1 (MQ=255) cTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAATGGTGGCGGTATCGCGCGTAACGt > 2:4523789/1‑150 (MQ=255) cTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGt > 1:2168904/1‑150 (MQ=255) cTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGt > 1:4899703/1‑150 (MQ=255) cTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGt > 1:4249797/1‑150 (MQ=255) cTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTAGCGCGCGTAACGt > 2:4285523/1‑150 (MQ=255) ttattaACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGttt > 2:2534659/1‑150 (MQ=255) tattaACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGtttt < 2:4429113/150‑1 (MQ=255) attaACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCTGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTc < 1:3920175/150‑1 (MQ=255) attaACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTc > 1:1123190/1‑150 (MQ=255) attaACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTc > 2:1248289/1‑150 (MQ=255) cccGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTcaac > 2:3548763/1‑150 (MQ=255) tCCAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATACACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAagag < 2:148834/150‑1 (MQ=255) cAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa < 2:727450/150‑1 (MQ=255) cAGCTGTAACCGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa > 1:5169560/1‑150 (MQ=255) aGCTGTAACCGTTCGGGCAAAGAAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAg < 2:2437655/150‑1 (MQ=255) tGTAACCGTTCGGGAAAAGCAAAA‑TGCTGTTGTTGTGTGGTTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGgcg < 1:3397632/150‑1 (MQ=255) ccGTTC‑GGCAAAACAAAATTGCTGTTGTTGTGGGGGTTACCGATAACAACCTTTTTCCCAACACCTACTTGCCCCCGCTAAAAAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTcc < 1:4952518/150‑1 (MQ=255) cGTTCGGGCAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCg > 2:4849005/1‑150 (MQ=255) cAAAGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTAc < 2:3117626/150‑1 (MQ=255) | CTGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAACGCAAAA‑TGCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTAC > CP009273/3110604‑3110897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |