| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,182,647 | G→T | 100% | pseudogene (1868/2445 nt) | yqiG → | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,182,647 | 0 | G | T | 98.4% | 1028.0 / 4.7 | 321 | pseudogene (1868/2445 nt) | yqiG | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (1/4); new base T (145/171); total (146/175) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 324 total aligned reads displayed.
GGTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAAT > CP009273/3182500‑3182792 | ggTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCtag > 1:4886237/1‑150 (MQ=255) gTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCtaga > 1:1244582/1‑150 (MQ=255) tATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGAc < 1:2929085/150‑1 (MQ=255) aTGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACa < 2:4642369/150‑1 (MQ=255) tGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAg < 2:2627186/150‑1 (MQ=255) aCTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGtt > 2:2467834/1‑150 (MQ=255) tctTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGttat > 2:1642243/1‑150 (MQ=255) tCCTATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTtattat < 2:3642069/150‑1 (MQ=255) cctaTCGAAATAATTCATGGAGCGTTTCTGCTTCAGGCGACAATGATGAATACAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTattatt < 1:3900753/147‑1 (MQ=255) ccGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTattatt > 1:1657958/1‑150 (MQ=255) cGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATtc < 2:4949602/150‑1 (MQ=255) cGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATtc > 1:3969915/1‑150 (MQ=255) gATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATtct > 2:3711860/1‑150 (MQ=255) gATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATtct > 1:4107516/1‑150 (MQ=255) gATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATtct > 1:1543979/1‑150 (MQ=255) aTCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATtctc < 2:2199219/150‑1 (MQ=255) gAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGa < 2:3376293/150‑1 (MQ=255) aataatTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAAt < 1:498356/150‑1 (MQ=255) ataatTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATg < 1:1632003/150‑1 (MQ=255) ataatTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATg > 2:2987810/1‑150 (MQ=255) aatTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGcc > 1:602389/1‑150 (MQ=255) ttCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAg > 1:1759556/1‑150 (MQ=255) ccTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGtt < 1:1380409/150‑1 (MQ=255) cTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTg > 2:4736715/1‑150 (MQ=255) cTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATACAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTg < 1:4698533/150‑1 (MQ=255) tGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTgg < 1:3578049/150‑1 (MQ=255) tGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTgg > 2:3751733/1‑150 (MQ=255) gCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATg < 2:2125241/150‑1 (MQ=255) gTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGt > 1:2899638/1‑150 (MQ=255) cTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGttcat < 1:5113210/150‑1 (MQ=255) gCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGttcattc < 2:903184/150‑1 (MQ=255) ttCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCAc < 1:4856583/150‑1 (MQ=255) tCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACt < 2:1818476/150‑1 (MQ=255) tCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACt < 1:2556567/150‑1 (MQ=255) tCAGGCGACAATGAGGAATTCAAAGATATGACAGCGTCACTACGCGCCAGTTATCAGCATAAGACCGAGAACGGTCGACTCTACCTCTCCGGTACTTCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACt < 1:1562285/150‑1 (MQ=255) cAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTg < 1:2024691/150‑1 (MQ=255) aGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGc > 1:1447122/1‑150 (MQ=255) cGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGAc > 2:3572482/1‑150 (MQ=255) aCAATGCTGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTc < 2:4587813/150‑1 (MQ=255) cAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCg < 1:2542113/150‑1 (MQ=255) aaTGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGc > 1:5080195/1‑150 (MQ=255) atgatgAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGcc < 2:2383218/150‑1 (MQ=255) aaTTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTg > 2:1951701/1‑150 (MQ=255) ttCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGcc < 1:4375079/150‑1 (MQ=255) ttCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGcc < 2:3179039/150‑1 (MQ=255) ttCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGcc > 2:229424/1‑150 (MQ=255) tCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCg < 1:4563251/150‑1 (MQ=255) tCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCg > 1:3285638/1‑150 (MQ=255) cAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGc > 1:1898092/1‑150 (MQ=255) cAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGc > 2:4476724/1‑150 (MQ=255) cAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGc < 2:436103/150‑1 (MQ=255) aaaGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCt > 2:5150884/1‑150 (MQ=255) aaaGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCt > 2:4024257/1‑150 (MQ=255) gAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTATGAATTCCAGTTGTAATGTTTCATTCACTGCGAATCGCCACGGTGACGCTTTCCACGa > 2:1444126/1‑150 (MQ=255) aaaGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGAc > 1:1059881/1‑150 (MQ=255) aaaGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGAc > 1:3782276/1‑150 (MQ=255) aGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACta < 2:177244/150‑1 (MQ=255) gCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACtat < 2:205254/150‑1 (MQ=255) gCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACtat < 1:2329997/150‑1 (MQ=255) gCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACtat < 2:134291/150‑1 (MQ=255) gCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACtaa < 2:3958870/150‑2 (MQ=255) gTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAg < 1:2246988/150‑1 (MQ=255) tCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGc < 1:3659137/150‑1 (MQ=255) tCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGc > 2:1114094/1‑150 (MQ=255) cACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCg > 1:3542485/1‑150 (MQ=255) cACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCg > 1:4494328/1‑150 (MQ=255) cgcgCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGt < 2:691499/150‑1 (MQ=255) gcgaCATTTATCAGAATAATACCGAGAACGGTAGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTg < 1:2780275/150‑1 (MQ=255) gcCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCt < 1:4455577/150‑1 (MQ=255) gcCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCt > 2:1501153/1‑150 (MQ=255) gcCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCt > 2:1186684/1‑150 (MQ=255) acAGTTATCAGAATAATACCGAGACCGGTCGACTCTACCTCTCCGGTACATCACAGCTAGAAAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCTCCACGGTGCCGCTTTCCTCGACTATAGCGGTAGTGCTg < 2:4227478/149‑1 (MQ=255) cAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGa > 1:4015020/1‑150 (MQ=255) cAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGa > 1:3367475/1‑150 (MQ=255) tATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTcg > 2:5030412/1‑150 (MQ=255) ataataCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTa < 2:2799576/150‑1 (MQ=255) aataCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATg > 2:4193720/1‑150 (MQ=255) taCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGAt < 1:980986/150‑1 (MQ=255) taCCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGAt < 2:4314973/150‑1 (MQ=255) agaACGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACATTTATTATTCTCTGAATGCCTGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACg < 1:4353/150‑1 (MQ=255) aaCGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCa < 1:3017832/150‑1 (MQ=255) cGGTCGACTCTACCTCTCCGGTACATCACCGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGa < 1:244188/150‑1 (MQ=255) cGGTCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGa < 2:2878957/150‑1 (MQ=255) tCGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACgg < 2:3057358/150‑1 (MQ=255) cGACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGc < 1:5263142/150‑1 (MQ=255) gACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCa > 1:1013282/1‑150 (MQ=255) gACTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCa > 1:3550581/1‑150 (MQ=255) aCTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCAc > 1:3413750/1‑150 (MQ=255) aCTCTACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCAc > 2:5228434/1‑150 (MQ=255) ctACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGa > 2:1569942/1‑150 (MQ=255) tACCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGaa > 1:3622397/1‑150 (MQ=255) aCCTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGTGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAg > 1:3195173/1‑150 (MQ=255) ccTCTCCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGa < 2:1027612/150‑1 (MQ=255) tcCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATAtt < 1:831645/150‑1 (MQ=255) tcCGGTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATAtt < 2:3240424/150‑1 (MQ=255) ggTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTACTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCg < 1:4216198/150‑1 (MQ=255) ggTACATCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCAAGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCg < 1:4711487/150‑1 (MQ=255) aTCACAGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGATTGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACACGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGaa < 2:3894907/150‑1 (MQ=255) acaGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGAAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACaa > 2:969485/1‑150 (MQ=255) caGCTAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAAt < 1:743318/150‑1 (MQ=255) | GGTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAAT > CP009273/3182500‑3182792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |