| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,381,943 | C→A | 27.7% | T181T (ACG→ACT) | aaeA ← | p‑hydroxybenzoic acid efflux system component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,381,943 | 0 | C | A | 27.7% | 679.1 / 217.6 | 327 | T181T (ACG→ACT) | aaeA | p‑hydroxybenzoic acid efflux system component |
| Reads supporting (aligned to +/- strand): ref base C (122/114); new base A (53/38); total (175/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01 | |||||||||||
Only 100 of 340 total aligned reads displayed.
GCGGCAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAACCGTTTG > CP009273/3381794‑3382092 | ggCAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGt > 2:3289624/1‑150 (MQ=255) gCAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGtt < 1:4600841/150‑1 (MQ=255) gCAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGtt < 2:1028049/150‑1 (MQ=255) gCAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGtt < 1:3956054/150‑1 (MQ=255) cAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTg > 1:3722252/1‑150 (MQ=255) acacTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGAt < 2:169012/150‑1 (MQ=255) cacTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATc < 1:1835456/150‑1 (MQ=255) acTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATcc > 1:3276519/1‑150 (MQ=255) cTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCt < 2:1114030/150‑1 (MQ=255) aTCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCg < 2:3363453/150‑1 (MQ=255) aTCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCg < 2:2312907/150‑1 (MQ=255) aaCAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCCGCGCAACCGCCGTTGATCCTCGAGt > 2:2061083/1‑150 (MQ=255) gTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGtaata > 1:2159372/1‑150 (MQ=255) tCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGtaataa < 1:2608621/150‑1 (MQ=255) cccTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATaaa > 2:4640474/1‑150 (MQ=255) ccTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAAc > 2:4365637/1‑150 (MQ=255) ccTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAAc > 2:4152957/1‑150 (MQ=255) ccTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAAc < 2:3908699/150‑1 (MQ=255) cTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACt < 1:1601241/150‑1 (MQ=255) ttCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCa < 1:4884216/150‑1 (MQ=255) cAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCAcc < 1:1019150/150‑1 (MQ=255) cAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCAcc > 1:723036/1‑150 (MQ=255) gCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCgg > 2:2653735/1‑150 (MQ=255) ttGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAg < 2:3639324/150‑1 (MQ=255) tGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGa < 1:5041427/150‑1 (MQ=255) ttACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACg < 2:926852/150‑1 (MQ=255) tACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGt < 1:4371814/150‑1 (MQ=255) cTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATAGAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTg < 1:1773506/150‑1 (MQ=255) aaGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGtt < 1:2833259/150‑1 (MQ=255) aGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTg < 1:589819/150‑1 (MQ=255) aGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTg < 2:3201840/150‑1 (MQ=255) gcgTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCa < 1:5282882/150‑1 (MQ=255) cgTGATCACTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCATTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGacac > 2:884212/1‑150 (MQ=255) gATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCa > 2:3711645/1‑150 (MQ=255) gATATCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTATTCCATATAGTCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCa > 2:4472612/1‑150 (MQ=255) aTCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAg < 1:2022946/150‑1 (MQ=255) aTCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAg > 2:505782/1‑150 (MQ=255) tctcTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTTCATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGc < 1:1748191/150‑1 (MQ=255) tctGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGCCACCCAGCCa < 2:4125751/150‑1 (MQ=255) tACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATAGAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAACCTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGgc < 2:2938838/150‑1 (MQ=255) ccGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGgcgcgc < 1:2067411/150‑1 (MQ=255) ccGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGgcgcgc > 1:3453349/1‑150 (MQ=255) ggACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCgg > 1:53241/1‑150 (MQ=255) ggACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCgg > 2:4030860/1‑150 (MQ=255) ggACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCgg < 1:930009/150‑1 (MQ=255) aCGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGAt < 1:4640474/150‑1 (MQ=255) gCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCa < 1:3602421/150‑1 (MQ=255) aCCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCAcc < 1:1153278/150‑1 (MQ=255) cccTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGt < 1:1105886/150‑1 (MQ=255) ccTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTg < 1:2231136/150‑1 (MQ=255) ccTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTg < 1:2488940/150‑1 (MQ=255) cTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGc < 1:4854492/150‑1 (MQ=255) cTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGc > 2:144396/1‑150 (MQ=255) ccAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGtt < 1:4150938/150‑1 (MQ=255) cAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTc < 2:4789342/150‑1 (MQ=255) cAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTc < 1:3742436/150‑1 (MQ=255) cAGCTTAGTTTCTTCCATATAGGCCAGCACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTc > 2:2156187/1‑150 (MQ=255) aGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCa > 2:3884890/1‑150 (MQ=255) cTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCATCGCAACCGCCGTTGATCCTCGATTAATAAACTCACAGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAg > 2:2673764/1‑150 (MQ=255) tAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGAt > 2:1981075/1‑150 (MQ=255) aGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATc < 2:2449111/150‑1 (MQ=255) tcttcCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGTGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGt < 2:1221875/150‑1 (MQ=255) cttcCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGtt > 1:44739/1‑150 (MQ=255) cttcCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGtt > 2:2722918/1‑150 (MQ=255) ttcCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGttt < 2:3393394/150‑1 (MQ=255) ccATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTg < 1:3427415/150‑1 (MQ=255) atatAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGcc > 1:3940082/1‑150 (MQ=255) atatAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGcc > 2:583635/1‑150 (MQ=255) ggCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATc < 2:1352494/150‑1 (MQ=255) ccAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATcgc > 2:495376/1‑150 (MQ=255) cAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATcgcg < 2:2849007/150‑1 (MQ=255) cAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATcgcg > 2:3762417/1‑150 (MQ=255) aTAGAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGc > 2:1408709/1‑150 (MQ=255) tAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGcc > 1:2285907/1‑150 (MQ=255) gAAGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTg > 2:5164728/1‑150 (MQ=255) aaGGAGTTCTGTTTCACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTgc < 1:2785090/150‑1 (MQ=255) aaGGAGTTCTGTTTCACCAGCGCAACCGCAGGTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTgc < 1:1513441/150‑1 (MQ=255) aGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTgcg > 1:2771000/1‑150 (MQ=255) ggAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTgcgc > 2:2217575/1‑150 (MQ=255) gAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCt > 1:3774945/1‑150 (MQ=255) gAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTAACCGGTATAGACGTTGAGCTTGGTCACCCAGCCATCTGCTGGCGCGCGCATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCt > 2:4574425/1‑150 (MQ=255) ttCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTc < 2:1613850/150‑1 (MQ=255) tGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCt > 2:1803878/1‑150 (MQ=255) gTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGcga > 1:4077462/1‑148 (MQ=255) gTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTa < 2:2610092/150‑1 (MQ=255) gTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTa < 1:4504582/150‑1 (MQ=255) tttCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTaa > 2:3164050/1‑150 (MQ=255) cACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTg < 1:814660/150‑1 (MQ=255) cACCAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTg > 1:1947065/1‑150 (MQ=255) ccAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGAt > 1:4798950/1‑150 (MQ=255) ccAGCGCAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGAt < 1:2396394/150‑1 (MQ=255) aGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGc < 1:1357029/150‑1 (MQ=255) gcAACCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTGTCGCTAACTGATGCAGa > 1:307914/1‑150 (MQ=255) cAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGaa < 1:3201163/150‑1 (MQ=255) aaCCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAAc < 1:3181500/150‑1 (MQ=255) aaCCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAAc > 2:3503438/1‑150 (MQ=255) aCCGCAGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAAcc < 2:667157/150‑1 (MQ=255) ccgcagTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAACCg < 2:3940082/150‑1 (MQ=255) cgccgTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAACCGt > 2:1884952/1‑150 (MQ=255) gccgTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCCGCGCTTTCGCTAACTGATGCAGAACCGtt > 1:4270736/1‑150 (MQ=255) | GCGGCAACACTATCAACAGTCCCTTTCAGCACTTTGTTACTGCCAAGCGGCGTGATCTCTGCACGATACCCCGGACGCACCCCTTCCAGCTTAGTTTCTTCCATATAGGCCAGTACATAGAAGGAGTTCTGTTTCACCAGCGCAACCGCCGTTGATCCTCGAGTAATAAACTCACCGGTATAGACGTTGAGGTTGGTCACCCAGCCATCTGCTGGCGCGCGGATCACCGTGCGTTCAAGATCCAGTTTTGCCAGATCGCGGGTCGCCTGCGCTTTCGCTAACTGATGCAGAACCGTTTG > CP009273/3381794‑3382092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |