| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,543,793 | G→T | 9.2% | T680T (ACC→ACA) | malP ← | maltodextrin phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,543,793 | 0 | G | T | 9.2% | 1042.4 / 50.2 | 318 | T680T (ACC→ACA) | malP | maltodextrin phosphorylase |
| Reads supporting (aligned to +/- strand): ref base G (134/152); new base T (14/16); total (150/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.05e-01 | |||||||||||
Only 100 of 321 total aligned reads displayed.
CTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGAAATTTG > CP009273/3543644‑3543942 | gtgCAGCATCTGGTATATGGCATGCTTATCGCCGTCGCTGTATTTGCCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGt < 2:4345538/150‑1 (MQ=255) gcagcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt < 2:1081651/150‑1 (MQ=255) cagcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATg > 2:4292079/1‑150 (MQ=255) cagcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATg < 2:4441092/150‑1 (MQ=255) agcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGa > 2:3387541/1‑150 (MQ=255) caTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCGTTGGCCAGAATTGCCTTCACTTGTTCCACTGTATGAcc > 2:4478846/1‑150 (MQ=255) aTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCACTTTCAAAACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCATTGGCCAGAATTGCCGTCACTTGTTCCACGGTATGACCa > 1:1035105/1‑150 (MQ=255) ggTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCATCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaaaaa > 1:5228842/1‑150 (MQ=255) gAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa > 2:2162389/1‑150 (MQ=255) gAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa > 2:1822933/1‑150 (MQ=255) aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAg < 2:2788142/150‑1 (MQ=255) aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAg < 2:1441603/150‑1 (MQ=255) aGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACTGTATGACCAAAAATAAAGa > 1:2978353/1‑150 (MQ=255) ggCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGat < 1:983721/150‑1 (MQ=255) gCATGCTTATCGCCGTCGCTGTATTTACCGCCTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGata < 1:2615466/150‑1 (MQ=255) cATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGatat < 1:4145493/150‑1 (MQ=255) cATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGatat > 2:5108386/1‑150 (MQ=255) aTGTTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtt > 2:1125698/1‑150 (MQ=255) aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtt > 1:3035805/1‑150 (MQ=255) aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCAACGGTATGACCAAAAATAAATATAtt > 1:4780376/1‑150 (MQ=255) aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACGTGTTCCACGGTATGACCAAAAATAAAGATAtt > 2:4556954/1‑150 (MQ=255) tGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAttt < 1:790554/150‑1 (MQ=255) cTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttc < 1:4236992/150‑1 (MQ=255) ttATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCACTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttct < 2:1574542/150‑1 (MQ=255) ttATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACTGTATGACCAAAAATAAAGATATTttct < 1:5179186/150‑1 (MQ=255) tATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttctt < 2:5067832/150‑1 (MQ=255) cGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCAc < 2:2928311/150‑1 (MQ=255) ccGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCg < 1:731616/150‑1 (MQ=255) ccGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCg < 2:1531705/150‑1 (MQ=255) cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACTGTATGACCAAAAATAAAGATATTTTCTTCACCGa > 2:3009803/1‑150 (MQ=255) cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGa > 2:2030235/1‑150 (MQ=255) cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGa > 2:2509000/1‑150 (MQ=255) cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGa > 1:2415840/1‑150 (MQ=255) cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTAACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGa > 1:4557169/1‑150 (MQ=255) cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCAACTTATCTTTCTTACGCCATTTCACCGGGTCGTATCCTTTGGCCAGAATTGACTTAACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTAAACGa > 1:4544405/1‑150 (MQ=255) gTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTATTCACCGAc > 1:4911979/1‑150 (MQ=255) gTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCAACGGTATGACCAAAAATAAAGATATTTTCTTCACCGAc > 2:5195465/1‑150 (MQ=255) tCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACt < 2:3290914/150‑1 (MQ=255) tCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACt > 1:1398377/1‑150 (MQ=255) tCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACt > 2:1773177/1‑150 (MQ=255) cGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACTGTATGACCAAAAATAAAGATATTTTCTTCACAGACta > 2:3182975/1‑149 (MQ=255) cGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACtt > 2:1731378/1‑150 (MQ=255) gCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACttt < 2:3602388/150‑1 (MQ=255) cTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTtc > 1:5098961/1‑150 (MQ=255) tATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCg < 2:721093/150‑1 (MQ=255) aTTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTGTCTCgg > 2:2359856/1‑150 (MQ=255) tACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGa > 1:4875079/1‑150 (MQ=255) ttCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAAc > 1:1725463/1‑150 (MQ=255) ttCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAAc < 1:3219401/150‑1 (MQ=255) gtCCAGCTCTTTCAATACTGCTTCCAGCACCTTATCTCTCGTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCATTATTGCCTTCACTAGTTCCACGGTATGTCCTAAAATAAAGATATTTTCTTCTCCGACTTTCTCGGCGATTTCAAc < 2:2888018/149‑1 (MQ=255) ccAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAATTTCTTCACCGACTTTCTCGGCGATTTCAACGt > 2:4744764/1‑150 (MQ=255) cAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGtt < 2:4807149/150‑1 (MQ=255) cAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGtt < 2:1817882/150‑1 (MQ=255) aGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTc < 2:373027/150‑1 (MQ=255) aaTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATcc > 1:3381990/1‑150 (MQ=255) aaTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATcc > 1:682206/1‑150 (MQ=255) aTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCa > 1:604194/1‑150 (MQ=255) aTACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCa < 1:1642124/150‑1 (MQ=255) aCTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGc > 2:4894722/1‑150 (MQ=255) tGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGt > 2:402063/1‑150 (MQ=255) gTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTAcc > 2:4678107/1‑150 (MQ=255) gTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCATTGGCCAGAATTGCCTTCACTTTATCCACGGTATGACCAAAAATAAATATATATTCTTCACCTACTTTCACGGCCAATTAAAAGTTCGCCCCATACAGCCTAcc > 1:4073340/1‑150 (MQ=255) ccAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGa > 2:883793/1‑150 (MQ=255) aGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACa > 1:479722/1‑150 (MQ=255) aCCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTa > 2:1372274/1‑150 (MQ=255) aCCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTa > 2:5320186/1‑150 (MQ=255) ccTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTaa < 2:639869/150‑1 (MQ=255) ccTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTaa < 1:2339299/150‑1 (MQ=255) ttATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAgc < 2:4161578/150‑1 (MQ=255) ctttcttCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCAc < 2:1635278/150‑1 (MQ=255) tttcttCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCAcc < 1:3905498/150‑1 (MQ=255) tcttcCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCAt > 1:2212306/1‑150 (MQ=255) tcttcCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATAGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCAt < 1:3514554/150‑1 (MQ=255) cttcCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCAtt < 1:2162389/150‑1 (MQ=255) ccGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAg < 1:1329844/150‑1 (MQ=255) gCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAgcg < 1:3059498/150‑1 (MQ=255) cATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGcc > 1:4432866/1‑150 (MQ=255) cATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGcc > 1:284447/1‑150 (MQ=255) aTTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACTGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCa > 1:3709402/1‑150 (MQ=255) aTTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCa < 1:270400/150‑1 (MQ=255) aTTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCa > 1:2906693/1‑150 (MQ=255) tttCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAg > 1:656592/1‑150 (MQ=255) gTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGcc < 2:1194432/150‑1 (MQ=255) tAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCg > 1:365976/1‑150 (MQ=255) ccTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTa < 1:2874956/150‑1 (MQ=255) cTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTAc < 2:4209076/150‑1 (MQ=255) tttGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTAcc > 1:2019613/1‑150 (MQ=255) ccAGAATTGACTTCACTTGTTCCACGTTATGACAAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAg < 1:1868083/150‑1 (MQ=255) gAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGctt < 2:2252991/150‑1 (MQ=255) aaTTGCCTTCACTTGTTCCACGGTATGACCAAAAGTAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGcttc > 2:1903361/1‑150 (MQ=255) tGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTACAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCAAAGAGCGCCAGATTCATATAGCCGGTACCGGAAGCTTCatt > 2:3821171/1‑150 (MQ=255) ttGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGt < 1:3160807/150‑1 (MQ=255) tGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTc < 2:3580137/150‑1 (MQ=255) tGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTc < 1:749969/150‑1 (MQ=255) gTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCg < 2:331708/150‑1 (MQ=255) tCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGaa < 2:3062556/150‑1 (MQ=255) ccACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGaaa > 1:393983/1‑150 (MQ=255) cACTGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGAAAt < 2:3709402/150‑1 (MQ=255) cACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGAAAt < 1:5315644/150‑1 (MQ=255) ggTATGACCAAAAATAAATATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGAAATTTg < 1:2509000/150‑1 (MQ=255) | CTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCACCGACTTTCTCGGCGATTTCAACGTTCGCCCCATCCAGCGTACCGACAGTAAGCGCACCATTGAGCGCCAGTTTCATATTGCCGGTACCGGAAGCTTCTTTACCTGCAGTCGAAATTTG > CP009273/3543644‑3543942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |