| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,566,100 | G→T | 25.5% | R255S (CGC→AGC) | glgB ← | 1,4‑alpha‑glucan branching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,566,100 | 0 | G | T | 25.5% | 730.5 / 190.9 | 320 | R255S (CGC→AGC) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base G (116/122); new base T (46/36); total (162/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 323 total aligned reads displayed.
CGGTTGGCTGATAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCATAAG > CP009273/3565953‑3566249 | ggTTGGCTGATAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACg > 2:368471/1‑150 (MQ=255) gTTGGCTGATAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGc > 1:3047762/1‑150 (MQ=255) ggCTGATAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAg > 1:1011410/1‑150 (MQ=255) gCTGATAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAgg < 1:4682494/150‑1 (MQ=255) aTAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAAcc > 1:1537471/1‑150 (MQ=255) aTAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAAcc > 1:1624900/1‑150 (MQ=255) aTAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAAcc > 1:5132398/1‑150 (MQ=255) aaCCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCa < 1:1726504/150‑1 (MQ=255) aaCCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCa < 2:1038005/150‑1 (MQ=255) aaCCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCa < 1:3717823/150‑1 (MQ=255) ccccAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAgg < 1:5302555/150‑1 (MQ=255) cccAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGt < 1:5038929/150‑1 (MQ=255) ccAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTg < 1:3028653/150‑1 (MQ=255) aaCTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGaa > 2:4747713/1‑150 (MQ=255) aaCTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGGTGTCGGTGTGGCGACGCCAGGAACCCAGGTGaa > 2:4283877/1‑150 (MQ=255) tGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACtt > 2:3589274/1‑150 (MQ=255) cATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCAt < 1:4617710/150‑1 (MQ=255) cATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCAt < 1:5011940/150‑1 (MQ=255) aTCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATa < 2:1353813/150‑1 (MQ=255) aaGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATa < 1:1405838/150‑1 (MQ=255) ggATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATagag < 1:1216349/150‑1 (MQ=255) ggATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATagag < 1:3297111/150‑1 (MQ=255) tGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGAtt < 1:5313682/150‑1 (MQ=255) tGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGAtt > 2:756324/1‑150 (MQ=255) gCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTg < 2:212774/150‑1 (MQ=255) gCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTg < 2:3702143/150‑1 (MQ=255) cTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTgg > 2:3738113/1‑150 (MQ=255) cTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTgg > 2:518721/1‑150 (MQ=255) cTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTgg > 2:520300/1‑150 (MQ=255) tCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGgc < 2:5246868/150‑1 (MQ=255) cGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGgcg < 1:4854215/150‑1 (MQ=255) gTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGgcgc > 2:487462/1‑150 (MQ=255) tAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCAt < 2:4633088/150‑1 (MQ=255) tGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCaa < 2:3132937/150‑1 (MQ=255) agtTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTc > 2:4086149/1‑150 (MQ=255) agtTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTc > 2:776297/1‑150 (MQ=255) agtTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATAGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTc < 1:1939116/150‑1 (MQ=255) ttCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCCGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGc > 2:1645942/1‑150 (MQ=255) tCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCt < 2:2030525/150‑1 (MQ=255) gAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCttt > 1:4239834/1‑150 (MQ=255) gAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCttt < 1:404202/150‑1 (MQ=255) gAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCttt < 1:258496/150‑1 (MQ=255) aGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCtttt < 2:195032/150‑1 (MQ=255) gTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCtttttt < 1:58495/150‑1 (MQ=255) tGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTg > 2:3264049/1‑150 (MQ=255) tGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTg > 2:4257963/1‑150 (MQ=255) tGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGACAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTg > 1:3856781/1‑150 (MQ=255) gggTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTgc > 1:40075/1‑150 (MQ=255) gggTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTgc < 2:4704256/150‑1 (MQ=255) aaaGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCACTTTTTTGCGctc > 2:972451/1‑150 (MQ=255) aaGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGctct > 2:4788817/1‑150 (MQ=255) aaGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGctct < 1:3935917/150‑1 (MQ=255) aGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCtt < 1:922286/150‑1 (MQ=255) aGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCtt > 2:1468749/1‑150 (MQ=255) catccatTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGt > 1:1272539/1‑150 (MQ=255) catccatTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGt > 2:3760707/1‑150 (MQ=255) ccatTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTg > 1:2254129/1‑150 (MQ=255) catTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGt > 2:1536174/1‑150 (MQ=255) catTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGt > 1:3122736/1‑150 (MQ=255) atTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTATCTCAAACATAAATTGTTGTCGGTGTGGCGACGACAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTa < 2:3423510/150‑1 (MQ=255) ttAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACa > 1:558709/1‑150 (MQ=255) gCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAAcc > 1:115338/1‑150 (MQ=255) cATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCt > 2:4013932/1‑150 (MQ=255) aTAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCtt > 2:3102124/1‑150 (MQ=255) aTAAGGCACCAGTTGATCGGCCAGCTCGAGGTAGCTCAACCAGAAATTGTTGTCGGTGTGTCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGAATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCtt < 2:121415/150‑1 (MQ=255) tAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCttt < 1:4790063/150‑1 (MQ=255) tAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACAttt > 1:2054092/1‑150 (MQ=255) aGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTc < 2:1689174/150‑1 (MQ=255) gCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCg < 2:2456801/150‑1 (MQ=255) cACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCgg > 1:4697303/1‑150 (MQ=255) cACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCgg > 1:4484264/1‑150 (MQ=255) ttGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGccc < 1:2307101/150‑1 (MQ=255) ttGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGccc < 2:871044/150‑1 (MQ=255) ttGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGccc < 1:756324/150‑1 (MQ=255) tGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCg > 1:3418043/1‑150 (MQ=255) tGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCg > 1:2813310/1‑150 (MQ=255) ggCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAAt < 2:1790250/150‑1 (MQ=255) ggCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAAt > 1:2953370/1‑150 (MQ=255) gCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAATTa < 2:4384663/150‑1 (MQ=255) tCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGAc < 1:2522870/150‑1 (MQ=255) cgcgGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGAcg < 1:3677059/150‑1 (MQ=255) ggTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAATATACGCgg > 2:4108573/1‑150 (MQ=255) tAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGtt > 1:2070209/1‑150 (MQ=255) gCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTc > 2:1747917/1‑150 (MQ=255) cTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTcc < 2:2966475/150‑1 (MQ=255) aaaTTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCAtt > 2:2808908/1‑150 (MQ=255) aaTTGTTGTCGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCAttt < 1:4392731/150‑1 (MQ=255) aTTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTg < 1:4557713/150‑1 (MQ=255) gttgtCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTgcgc > 2:3336949/1‑150 (MQ=255) cGGTGTGGCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCaa > 1:4150436/1‑150 (MQ=255) tgGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCa < 2:5325138/150‑1 (MQ=255) ggCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCAt < 2:3529350/150‑1 (MQ=255) ggCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCAt > 2:3464589/1‑150 (MQ=255) ggCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCAt < 1:1468749/150‑1 (MQ=255) ggCTACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCAt > 2:2220355/1‑150 (MQ=255) ggCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCAt > 1:4940865/1‑150 (MQ=255) ggCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCAt < 2:2370812/150‑1 (MQ=255) cGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCATaa < 1:518721/150‑1 (MQ=255) gACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCATAAg > 2:5035831/1‑150 (MQ=255) gACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCATAAg < 1:879455/150‑1 (MQ=255) | CGGTTGGCTGATAACCCCAACTGCCATCGAAGGGATGCTCGTTAATGGGCAGTAGTTCGAGGTGGGTAAAGCCCATCCATTTAGCATAAGGCACCAGTTGATCGGCCAGCTCGCGGTAGCTCAACCAGAAATTGTTGTCGGTGTGGCGACGCCAGGAACCCAGGTGAACTTCATAAATAGAGATTGGCGCATCAAACTGATTCGCTTTTTTGCGCTCTTCAGTCTGTACAACCTTTTCCGGCAGCCCGCAAATAAGAGACGCGGTTTCCGGGCGCATTTGCGCTTCAAAGGCATAAG > CP009273/3565953‑3566249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |