| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,590,636 | G→T | 100% | Y95* (TAC→TAA) | livK ← | leucine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,590,636 | 0 | G | T | 99.7% | 990.2 / ‑4.6 | 300 | Y95* (TAC→TAA) | livK | leucine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (153/146); total (154/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 300 total aligned reads displayed.
GTCCAGCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACGTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGTT > CP009273/3590489‑3590782 | cAGCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTAttt < 2:3000505/150‑1 (MQ=255) cccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAAt < 2:3690664/150‑1 (MQ=255) cccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAAt < 1:455839/150‑1 (MQ=255) ccGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATg > 2:5032230/1‑150 (MQ=255) cGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGc < 1:2948122/150‑1 (MQ=255) ggCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGcc > 1:5228937/1‑150 (MQ=255) cAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGt < 1:3360524/150‑1 (MQ=255) cAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGt < 2:1018354/150‑1 (MQ=255) aGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTc < 1:47868/150‑1 (MQ=255) gTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCa > 1:3693201/1‑150 (MQ=255) gTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCa < 2:792998/150‑1 (MQ=255) gTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCa < 1:2347353/150‑1 (MQ=255) cGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTa > 1:1507206/1‑150 (MQ=255) gCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTaa < 2:3777742/150‑1 (MQ=255) gCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTaa < 1:3602223/150‑1 (MQ=255) cATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAAc < 1:157236/150‑1 (MQ=255) aTAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACg > 1:25585/1‑150 (MQ=255) tAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGa > 1:4997710/1‑150 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGAt < 2:1377923/150‑1 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGAt < 2:3730410/150‑1 (MQ=255) aaTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTGATTTAATGCCGTCATTAACGAt > 1:4679180/1‑150 (MQ=255) aTGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGAtt < 1:4195114/150‑1 (MQ=255) gtgtTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGAtttt < 1:2742366/150‑1 (MQ=255) gtTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTttgt < 2:1614377/150‑1 (MQ=255) tGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTttgttg < 2:5047902/150‑1 (MQ=255) tGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTttgttg > 1:1162346/1‑150 (MQ=255) gATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTgg < 2:2845840/150‑1 (MQ=255) ccGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGAcc < 1:319710/150‑1 (MQ=255) cgTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCa > 2:5232851/1‑150 (MQ=255) cgTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCa > 2:4126257/1‑150 (MQ=255) ttGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAAc < 1:1479846/150‑1 (MQ=255) ttGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAAc < 1:553918/150‑1 (MQ=255) tGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACg > 2:660485/1‑150 (MQ=255) gTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCt < 2:2594768/150‑1 (MQ=255) gTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCt < 2:4789240/150‑1 (MQ=255) gCTCCGGGTTGGTAGCTACCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCTTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGtt > 2:2733920/1‑150 (MQ=255) cTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGttt > 1:2407542/1‑150 (MQ=255) cTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGttt > 2:3911255/1‑150 (MQ=255) gggTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCggg < 2:717076/150‑1 (MQ=255) tGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGc < 1:5031494/150‑1 (MQ=255) tCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATg < 1:5093764/150‑1 (MQ=255) gCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcg > 1:1269024/1‑150 (MQ=255) gCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcg > 2:707735/1‑150 (MQ=255) cTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcgt < 1:2937529/150‑1 (MQ=255) cTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGcgt < 2:4576714/150‑1 (MQ=255) atcatcAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTcc < 1:4624373/150‑1 (MQ=255) catcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCAc < 2:915303/150‑1 (MQ=255) atcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACg > 1:4431023/1‑150 (MQ=255) atcaGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACg < 1:1713091/150‑1 (MQ=255) aGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTAATATTCCACGCCa > 1:1387525/1‑150 (MQ=255) aTACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAAcc < 1:1944456/150‑1 (MQ=255) tACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCa > 2:3405851/1‑150 (MQ=255) aCCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAg < 2:1545014/150‑1 (MQ=255) ccTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGt > 2:3486812/1‑150 (MQ=255) ttCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGttt > 2:4286020/1‑150 (MQ=255) ttCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGttt > 2:471223/1‑150 (MQ=255) gTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATc > 1:1925394/1‑150 (MQ=255) gTCATCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATc < 1:614789/150‑1 (MQ=255) tCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGccc < 1:3246374/150‑1 (MQ=255) tCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGccc > 1:3998062/1‑150 (MQ=255) cATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCt > 2:2031286/1‑150 (MQ=255) tAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTa < 2:2480789/150‑1 (MQ=255) gATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAAt < 1:2811406/150‑1 (MQ=255) atatCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCGTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAAtt > 2:3239538/1‑150 (MQ=255) tGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTccccc > 1:5172290/1‑150 (MQ=255) tGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTccccc < 2:5136256/150‑1 (MQ=255) gACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCt < 2:2902428/150‑1 (MQ=255) cAGGCTGGGTAGAAGAAGAACACAGATGACCTATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTgg < 2:2362129/150‑1 (MQ=255) gggTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTaa > 1:2245394/1‑150 (MQ=255) ggTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAAt < 1:2090125/150‑1 (MQ=255) ggTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAAt < 2:5228878/150‑1 (MQ=255) gTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATg < 2:1897712/150‑1 (MQ=255) gTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATg > 2:3053285/1‑150 (MQ=255) gTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATg > 2:2430181/1‑150 (MQ=255) gTAGAAGAAGAACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATg > 2:2156579/1‑150 (MQ=255) agaagaagaACACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTc < 1:2644278/150‑1 (MQ=255) gaagaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCt > 2:1662082/1‑150 (MQ=255) aagaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCtt < 2:1162346/150‑1 (MQ=255) agaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCttt > 1:5275243/1‑150 (MQ=255) gaagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCACCCTTTGGCATTAATGTCTTTa > 2:638046/1‑150 (MQ=255) aagaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTaa > 2:1992864/1‑150 (MQ=255) agaaCACATATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAAt < 2:4584545/150‑1 (MQ=255) agaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAAt < 1:665255/150‑1 (MQ=255) agaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAAt < 1:1674977/150‑1 (MQ=255) gaaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAAtt < 2:1507206/150‑1 (MQ=255) aaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTg > 2:1086007/1‑150 (MQ=255) aaCACAGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTg < 1:4355096/150‑1 (MQ=255) acaGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCt > 2:83979/1‑150 (MQ=255) caGATGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTg > 1:3091690/1‑150 (MQ=255) tGACCAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgc < 2:1950061/150‑1 (MQ=255) ccAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgcg < 2:4354296/150‑1 (MQ=255) ccAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgcg > 1:3781746/1‑150 (MQ=255) ccAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGAcgcgcg > 2:957129/1‑150 (MQ=255) cAATAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACgcgcgc > 1:1058980/1‑150 (MQ=255) aTAACTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTTTTTAATTGCCTGACGCGCGCCg > 2:1343637/1‑150 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGtt > 2:2829152/1‑150 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGtt > 1:829993/1‑150 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGtt > 1:418151/1‑150 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGtt > 1:3457167/1‑150 (MQ=255) aaCTTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGtt > 1:2011276/1‑150 (MQ=255) | GTCCAGCCCGGCAGTACGCATAATGTGTTGATAACCGCGTTGGGTCAGCTCCGGGTTGGTCGCTCCCGGCGAGATCATCAGAATACCTTCGTCTTCATAGATATCTGACGCAGGCTGGGTAGAAGAAGAACACAGATGACCAATAACGTATTTAATGCCGTCATTAACGATTTTGTTGGCGACCGCAACGGCTTGTTTCGGGTCGCATGCGTCGTCATATTCCACGCCAACCAGTTTATCGCCCTTAATTCCCCCTTTGGCATTAATGTCTTTAATTGCCTGACGCGCGCCGTT > CP009273/3590489‑3590782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |