| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,667,555 | C→A | 69.8% | I278I (ATC→ATA) | yhjD → | inner membrane putative BrbK family alternate lipid exporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,667,555 | 0 | C | A | 69.8% | 324.4 / 313.2 | 319 | I278I (ATC→ATA) | yhjD | inner membrane putative BrbK family alternate lipid exporter |
| Reads supporting (aligned to +/- strand): ref base C (56/40); new base A (110/112); total (166/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
Only 100 of 321 total aligned reads displayed.
CGATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGA > CP009273/3667409‑3667704 | cGATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGtg < 2:4682379/150‑1 (MQ=255) gattgattGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTACAATAGtga > 2:5229078/1‑150 (MQ=255) gattgattGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtga > 1:4307131/1‑150 (MQ=255) gattgattGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtga < 1:4537642/150‑1 (MQ=255) gattgattGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtga < 1:3674162/150‑1 (MQ=255) attgattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGtgat > 1:2769024/1‑150 (MQ=255) attgattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtgat < 2:3946835/150‑1 (MQ=255) tgattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGtgatga < 1:2875040/150‑1 (MQ=255) gattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGAc > 1:3941489/1‑150 (MQ=255) gattgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGAc > 2:322479/1‑150 (MQ=255) attgGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGAcc > 2:4891983/1‑150 (MQ=255) ggCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCTCGAAAAAAAGCCCTGATTCGCGGAACTTTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATTGTGATGACCTac < 2:3102964/150‑1 (MQ=255) ggCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTac > 2:5146114/1‑150 (MQ=255) ggCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTac < 2:630282/150‑1 (MQ=255) cTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACAcc < 2:3427300/150‑1 (MQ=255) cTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACAcc > 1:228283/1‑150 (MQ=255) cTGGCGATTTCCATCTCCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACAcc > 1:1591801/1‑150 (MQ=255) tGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACAccc < 1:358453/150‑1 (MQ=255) ggCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCt > 1:2403940/1‑150 (MQ=255) tttCCATCTTCGCCAACTACCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCAt > 1:3095228/1‑150 (MQ=255) tttCCATCATCGCCAACAAACTTCATTTCTTCTGGATATTCAGGCGGTTGCCGCGCCACCCTCCCCGCAAAAAAGCCCAGAATCGCGGAACCATTCTGGCAGCTAATTGTTTTGAAGTGATTAAAATAGTGATTACCAACAcccaaccaa > 2:1129710/1‑144 (MQ=255) ccATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGt > 1:516345/1‑150 (MQ=255) tCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTtga > 2:3891901/1‑150 (MQ=255) gCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGaaa < 2:3705486/150‑1 (MQ=255) gCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGaaa < 1:3563849/150‑1 (MQ=255) gCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGaaa > 1:3916432/1‑150 (MQ=255) cAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCCGCCATCGTTGATGAAATc < 2:4073693/150‑1 (MQ=255) cAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCCGCCATCGTTGATGAAATc < 2:1411169/150‑1 (MQ=255) aaCTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATcc > 2:2527103/1‑150 (MQ=255) aCTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATccc > 2:2623539/1‑150 (MQ=255) cTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCTCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATcccc < 1:3154968/150‑1 (MQ=255) cTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATcccc > 1:386152/1‑150 (MQ=255) tATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCCACCGCGCAAAAAATCCCAGATACGCGCAACATTTCTGGCTGCTATTGGTTTAGAAGTGATTAAAATCTTGAAGACATACAACCTGCCATCGTTGATGAAATcccca > 1:1219077/1‑149 (MQ=255) tCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCctc < 2:2184509/150‑1 (MQ=255) cTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCctct > 2:2982602/1‑150 (MQ=255) tGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTg > 1:1970163/1‑150 (MQ=255) ttttCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGgcg < 1:4134622/150‑1 (MQ=255) tttCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGgcgc > 2:4829850/1‑150 (MQ=255) tttCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGgcgc < 1:807500/150‑1 (MQ=255) ttctGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCgcagca > 2:4717390/1‑150 (MQ=255) tGGATCGTCTGGCGGGGGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACAGTTCGGGCTGCTATTGGTTTTGACGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAttt < 2:742888/150‑1 (MQ=255) ggATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTg > 2:748872/1‑150 (MQ=255) agATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCACAACAGCCCTGAGACCCGGCCCATGTCTGGCGGCTCGTGGTTTGGACGTGAGTCAAATCGTGATGACCTACACCCTGCCATCGGTGATGAAATCCCCCTCTGGCgcagccggtg > 2:4555053/2‑145 (MQ=255) aTCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGt < 1:4405666/150‑1 (MQ=255) aTCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGt < 1:1406490/150‑1 (MQ=255) cgtctGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTc < 2:4013963/148‑1 (MQ=255) gCGGGTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCt < 2:3712661/150‑1 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTgg > 1:3750198/1‑150 (MQ=255) ggTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTgg > 1:978650/1‑150 (MQ=255) gTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTggg < 2:5088958/150‑1 (MQ=255) gCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCt < 1:3971639/150‑1 (MQ=255) gcgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGAt > 2:1697716/1‑150 (MQ=255) cgcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATg < 1:3179701/150‑1 (MQ=255) gcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATgg < 2:2538555/150‑1 (MQ=255) gcCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATgg < 2:1834440/150‑1 (MQ=255) cACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCa < 1:4667191/150‑1 (MQ=255) cACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCa < 1:1554691/150‑1 (MQ=255) ccGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAtt < 2:3840095/150‑1 (MQ=255) gTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAtttt < 2:4771576/150‑1 (MQ=255) tCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCAttttt < 2:1770986/150‑1 (MQ=255) cgcgCAAACAAGCCCTGCTTCGCGGAACCTTTCTGGCTGCTCTTGGGTTTGAAGTGATTACAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGGTCCGTGCTGGGGCTGATGGCATTTTTCt < 2:3773387/150‑1 (MQ=255) gcAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTAct < 1:4940831/150‑1 (MQ=255) aaaaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtc > 1:1050929/1‑150 (MQ=255) aaaaaGCCCTGATTCGCGGAACATTTCTGGGTGGTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtct < 2:3802636/150‑1 (MQ=255) aaaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtct > 1:1708692/1‑150 (MQ=255) aaaaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTActtctt < 1:4829597/150‑1 (MQ=255) aaGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCg > 2:4308055/1‑150 (MQ=255) ccTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCg > 2:1204451/1‑150 (MQ=255) ccTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCg < 2:2882676/150‑1 (MQ=255) gATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGttt < 2:4254756/150‑1 (MQ=255) ttCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGa < 1:4626704/150‑1 (MQ=255) cgcgGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACg > 1:2701467/1‑150 (MQ=255) cgGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCt > 1:743581/1‑150 (MQ=255) ggAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTg > 2:2737359/1‑150 (MQ=255) ggAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTg > 2:1247825/1‑150 (MQ=255) aTTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTg < 1:748861/150‑1 (MQ=255) tttCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTgc < 2:232192/150‑1 (MQ=255) cTGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGcgcg < 2:366558/150‑1 (MQ=255) tGGCTGCTATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCgcgg > 1:2048111/1‑150 (MQ=255) gctgctATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCgcggcg > 2:4023800/1‑150 (MQ=255) ctgctATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGt > 1:1736465/1‑150 (MQ=255) gctATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTgg > 2:1195481/1‑150 (MQ=255) ctATTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGa > 2:3573335/1‑150 (MQ=255) aTTGGTTTTGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGAtt < 1:3383139/150‑1 (MQ=255) tGAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCAGTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCAccgc > 1:691738/1‑150 (MQ=255) tGAAGGGATTAAAATAGTGATGACCTACAACCTGCCATCGTTGATGAAATCCCCCGCAGGCGCAGCATTTGGTTCCGTGATGGGGCTCATGGCATTTTTCTACTTCTTCGCCCGATGGACGCTGTATTTCGCGGCGTGCATTGCCAccgc > 2:1987468/1‑150 (MQ=255) gAAGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCAccgcc > 1:327629/1‑150 (MQ=255) aaGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCAccgccg > 1:2211977/1‑150 (MQ=255) aGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGa > 1:2527305/1‑150 (MQ=255) aGTGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGa > 2:1869660/1‑150 (MQ=255) tGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAat > 2:212111/1‑150 (MQ=255) tGATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAat < 2:1570228/150‑1 (MQ=255) gATTAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAata > 2:4949777/1‑150 (MQ=255) aTTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAatat < 1:4891983/150‑1 (MQ=255) ttAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAAtata < 1:2744438/150‑1 (MQ=255) ttAAAATAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAAtata < 2:5285541/150‑1 (MQ=255) aaaTCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAg > 1:2589873/1‑150 (MQ=255) aaaTCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAg > 1:5290524/1‑150 (MQ=255) aaTAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAga > 1:212759/1‑150 (MQ=255) aaTAGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAga > 1:1484012/1‑150 (MQ=255) | CGATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGA > CP009273/3667409‑3667704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |