| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,674,442 | G→T | 12.6% | R287S (CGT→AGT) | yhjJ ← | putative periplasmic M16 family chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,674,442 | 0 | G | T | 12.6% | 1120.6 / 82.7 | 344 | R287S (CGT→AGT) | yhjJ | putative periplasmic M16 family chaperone |
| Reads supporting (aligned to +/- strand): ref base G (138/162); new base T (26/18); total (164/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 351 total aligned reads displayed.
ACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCTTTCAGTTCGCCAAACGTTT > CP009273/3674293‑3674591 | acacTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGTTTCACg < 2:307626/150‑1 (MQ=255) cacTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGa > 2:36486/1‑150 (MQ=255) cacTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGa > 2:26153/1‑150 (MQ=255) acTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGaa < 1:5003915/150‑1 (MQ=255) acTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGaa > 1:2753238/1‑150 (MQ=255) cTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAAt > 2:397750/1‑150 (MQ=255) cTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAAt < 2:5241298/150‑1 (MQ=255) tGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATc < 1:4780755/150‑1 (MQ=255) gcgcACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCg < 2:2944881/150‑1 (MQ=255) cacgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCt > 2:1239052/1‑150 (MQ=255) cacgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCt < 2:3796542/150‑1 (MQ=255) cacgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCt < 2:4451536/150‑1 (MQ=255) acgcaGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTg < 1:1598558/150‑1 (MQ=255) caGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCa > 1:789207/1‑150 (MQ=255) aGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCAc > 1:741481/1‑150 (MQ=255) tACATCACACGTCAGTCATATCCAAGACCGTTGTCTTTGCTGTTACTGGCACTTATCGCTTGCTGTTCATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGc < 1:5220356/150‑1 (MQ=255) tACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGc < 2:2748654/150‑1 (MQ=255) aGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTa > 2:4981595/1‑150 (MQ=255) cacaCGGCAGTCCAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATc < 1:1778401/150‑1 (MQ=255) tCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgata > 1:2835081/1‑150 (MQ=255) cAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgatag > 1:1041513/1‑150 (MQ=255) aaaTCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTCTCCCACATgataga > 2:4828034/1‑150 (MQ=255) aTCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgatagata > 1:263670/1‑150 (MQ=255) aTCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgatagata < 1:3739994/150‑1 (MQ=255) aTCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATgatagata < 1:2078288/150‑1 (MQ=255) tCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATaa < 1:3797974/150‑1 (MQ=255) aaGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCg > 2:4713325/1‑150 (MQ=255) aaGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCg < 2:1853382/150‑1 (MQ=255) ccGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTcc < 1:189829/150‑1 (MQ=255) cGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCt < 1:3346153/150‑1 (MQ=255) gATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTg > 1:4842297/1‑150 (MQ=255) gATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTg > 1:1554254/1‑150 (MQ=255) gATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTg > 1:4096921/1‑150 (MQ=255) gATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTg < 2:2309227/150‑1 (MQ=255) aTGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGa > 1:2157362/1‑150 (MQ=255) tGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACAGGATAGATAACCGGTCCTGAc > 1:3157360/1‑150 (MQ=255) cTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCa > 2:4192889/1‑150 (MQ=255) tttGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCAc < 2:4123689/150‑1 (MQ=255) tttGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCAc < 2:2715628/150‑1 (MQ=255) ttGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCAcc < 2:1910249/150‑1 (MQ=255) gCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACcgc < 1:4935142/150‑1 (MQ=255) cTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACcgcg > 2:696002/1‑150 (MQ=255) cTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACcgcg > 1:1317513/1‑150 (MQ=255) tGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgt > 2:3479520/1‑150 (MQ=255) tGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgt > 1:968981/1‑150 (MQ=255) ttACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtca < 1:4458261/150‑1 (MQ=255) aCTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtcagt > 1:2520105/1‑150 (MQ=255) cTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtcagtc < 1:397750/150‑1 (MQ=255) tGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCgtcagtca < 1:4644641/150‑1 (MQ=255) ggCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCat > 1:5093385/1‑150 (MQ=255) aCTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCataat < 2:2000445/150‑1 (MQ=255) aCTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCataat > 1:3460863/1‑150 (MQ=255) ttAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATAc > 1:4354499/1‑150 (MQ=255) ttAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATAc > 1:2715851/1‑150 (MQ=255) tAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACt < 1:4235512/150‑1 (MQ=255) aaCGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATACTACTc > 2:572281/1‑150 (MQ=255) aCGCTTGCTGAACATGCCAGAACAGCGACTCGCTGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGATGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCa < 2:358124/150‑1 (MQ=255) ttGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGc > 2:2417964/1‑150 (MQ=255) gCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCtt < 2:1211711/150‑1 (MQ=255) cTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTc < 2:1506458/150‑1 (MQ=255) cTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTc < 2:4169050/150‑1 (MQ=255) gAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcg > 2:468119/1‑150 (MQ=255) gAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcg < 1:4317299/150‑1 (MQ=255) gAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcg > 1:1677675/1‑150 (MQ=255) aaCATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcgc > 2:868599/1‑150 (MQ=255) aCATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcgca < 1:1959853/150‑1 (MQ=255) tGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcgcacgc > 1:3872908/1‑150 (MQ=255) gCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCcgcacgca > 1:582460/1‑150 (MQ=255) cAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGc < 2:1513902/150‑1 (MQ=255) cAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGgaga < 1:1362925/150‑1 (MQ=255) cAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGgaga < 1:3591412/150‑1 (MQ=255) aGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGaa > 2:1977956/1‑150 (MQ=255) gcCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGc < 2:2262332/150‑1 (MQ=255) ccTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCg < 2:4912486/150‑1 (MQ=255) cTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGt < 2:2539888/150‑1 (MQ=255) cgGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGc > 2:2476341/1‑150 (MQ=255) gggCCAGGTCCGCACGCCTGTAGCGCAGCAGTGCGTCTGATTCACGAATCGTCTGCCACGGCGTATCCCACATGATAGATAACCTGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCggaa < 2:1437846/150‑3 (MQ=255) gggCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCa > 1:2366966/1‑150 (MQ=255) gTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGc > 1:5329052/1‑150 (MQ=255) tCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCt > 1:995158/1‑150 (MQ=255) ccGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCCCCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTg < 1:2254828/150‑1 (MQ=255) ccGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACACAGCGGAGAAAGCGTCGGCACCGGAGCTg < 2:5324031/150‑1 (MQ=255) cACGCCAGTAGCGCAGCAGTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCg > 1:3102725/1‑150 (MQ=255) cACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCg > 2:791598/1‑150 (MQ=255) aCGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGt < 2:3891348/150‑1 (MQ=255) cGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGtt > 2:1658002/1‑150 (MQ=255) cGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGtt < 2:510482/150‑1 (MQ=255) gTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACg < 1:1152950/150‑1 (MQ=255) aGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGtt > 2:1119485/1‑150 (MQ=255) cgcAGCAGTGCGGCTGATTCCCGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCGTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTg < 2:1767531/150‑1 (MQ=255) cgcAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTg < 1:3129152/150‑1 (MQ=255) cagcagTGCGGCTGATTCACTAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGcc < 2:677201/150‑1 (MQ=255) agcagTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCt > 2:3374046/1‑150 (MQ=255) agcagTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCt < 1:915190/150‑1 (MQ=255) agcagTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCt < 1:2417964/150‑1 (MQ=255) ggCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCTTTCAGTTc > 1:333869/1‑150 (MQ=255) aTTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCTTTCAGTTCGCCaa > 1:4159450/1‑150 (MQ=255) cGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCTTTCAGTTCGCCAAACggt > 1:3191753/1‑148 (MQ=255) cGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTGTCACGTTTGCCTTTCAGTTCGCCAAACggt > 1:5071695/1‑148 (MQ=255) gAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCTTTCAGTTCGCCAAACGttt > 2:4327325/1‑150 (MQ=255) | ACACTGCGCACGCAGATACAGCACACGGCAGTCAAATCCAAGACCGATGTCTTTGCTGTTACTGGCACTTAACGCTTGCTGAACATGCCAGAACAGCGCCTCGCGGGCCAGGTCCGCACGCCAGTAGCGCAGCAGTGCGGCTGATTCACGAATCGGCTGCCACGGCGTATCCCACATGATAGATAACCGGTCCTGACGCACCGCGTCAGTCATAATACTCACCGCTTCCGCACGCAGCGGAGAAAGCGTCGGCACCGGAGCTGGCGTTTCACGTTTGCCTTTCAGTTCGCCAAACGTTT > CP009273/3674293‑3674591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |