| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,674,730 | C→A | 23.9% | D191Y (GAT→TAT) | yhjJ ← | putative periplasmic M16 family chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,674,730 | 0 | C | A | 23.9% | 728.8 / 163.3 | 304 | D191Y (GAT→TAT) | yhjJ | putative periplasmic M16 family chaperone |
| Reads supporting (aligned to +/- strand): ref base C (127/104); new base A (37/36); total (164/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
GCCAAACGTTTTGTTTATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCATTTGCCAGAT > CP009273/3674581‑3674879 | cAAACGTTTTGTTTATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGt > 1:5036378/1‑150 (MQ=255) aaaCGTTTTGTTTATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTg < 1:958461/150‑1 (MQ=255) aaCGTTTTGTTTATTTGGTCGACAACCGAGCGCGCATCCACGGTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGa < 2:333869/150‑1 (MQ=255) ttATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAgg > 2:1958320/1‑150 (MQ=255) ttATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAgg > 2:3030372/1‑150 (MQ=255) tATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGt < 1:2943675/150‑1 (MQ=255) aTTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGtt > 2:4810189/1‑150 (MQ=255) aTTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGtt > 2:4370807/1‑150 (MQ=255) gTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGAccc < 1:2016010/150‑1 (MQ=255) tCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCt > 1:810875/1‑150 (MQ=255) cGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCtt < 2:3856113/150‑1 (MQ=255) cGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCtt < 1:2476399/150‑1 (MQ=255) aCAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTc < 1:384216/150‑1 (MQ=255) aCAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTc > 1:4297441/1‑150 (MQ=255) cAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCa > 2:1298520/1‑150 (MQ=255) aaCCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAg > 2:3193621/1‑150 (MQ=255) aaCCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAg > 1:3669300/1‑150 (MQ=255) aaCCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAg > 1:1719579/1‑150 (MQ=255) ccGAGCGCGCATCCACGTGTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGAc < 2:4988069/150‑1 (MQ=255) cGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACg > 2:2008563/1‑150 (MQ=255) gcgcgcATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATa < 1:4333233/150‑1 (MQ=255) gcgcATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAgc < 1:4325705/150‑1 (MQ=255) gcgcATCCACGTGTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAAATTTTTCCGCTCCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAgc < 1:1666568/150‑1 (MQ=255) gcATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAgcgc > 1:4078690/1‑150 (MQ=255) aTCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGcca > 1:585880/1‑150 (MQ=255) aTCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGcca > 1:1565073/1‑150 (MQ=255) ccACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGccacc < 1:377585/150‑1 (MQ=255) cACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGccacca > 2:4019002/1‑150 (MQ=255) tttCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGccc > 1:456545/1‑150 (MQ=255) tgtCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGccc < 2:5093385/148‑1 (MQ=255) ttCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGTGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCct > 2:4529230/1‑150 (MQ=255) ttCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCct > 2:2632306/1‑150 (MQ=255) tCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCctc < 2:2826678/150‑1 (MQ=255) cccACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCctct < 1:3162372/150‑1 (MQ=255) ccaGTAGCGTCAGTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTAt < 1:3396670/150‑1 (MQ=255) aGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCg > 1:2532983/1‑150 (MQ=255) aGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCg > 2:2887653/1‑150 (MQ=255) aGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCg > 1:4721853/1‑150 (MQ=255) gTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCgg > 2:2175713/1‑150 (MQ=255) aGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCa < 2:4344097/150‑1 (MQ=255) gCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAg < 2:4295313/150‑1 (MQ=255) cGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAgg < 2:1074523/150‑1 (MQ=255) cGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAgg < 2:853138/150‑1 (MQ=255) cATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCa < 2:4900631/150‑1 (MQ=255) aTTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCGGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAg > 1:4159923/1‑150 (MQ=255) aTTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAg < 1:1035729/150‑1 (MQ=255) aTTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAg > 2:4541514/1‑150 (MQ=255) ttGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAgg < 1:391743/150‑1 (MQ=255) ttGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAgg < 1:1371455/150‑1 (MQ=255) tGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGt > 2:1316412/1‑150 (MQ=255) gCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGTCCAGGtt > 1:3027952/1‑150 (MQ=255) ccGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGcca < 1:4968251/150‑1 (MQ=255) ggggTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGccacc < 2:605540/150‑1 (MQ=255) ggggTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCGTGAGTATCGGCAGGCCAGGTTGccacc > 2:2398628/1‑150 (MQ=255) tgtACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGt > 2:4068783/1‑150 (MQ=255) tgtACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGt < 1:2731463/150‑1 (MQ=255) gtACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTc > 2:156375/1‑150 (MQ=255) aCCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCt < 1:4843700/150‑1 (MQ=255) cATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGa > 2:4233848/1‑150 (MQ=255) tGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGc < 1:259885/150‑1 (MQ=255) gATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCa < 1:1146248/150‑1 (MQ=255) tAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAgc > 2:1692228/1‑150 (MQ=255) tAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAgc > 2:1121985/1‑150 (MQ=255) gAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCGTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAgcgc > 2:2983262/1‑150 (MQ=255) aaTCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTGTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGt > 2:119004/1‑150 (MQ=255) aaTTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGAt < 1:1446379/150‑1 (MQ=255) aaTTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGAt > 2:4854317/1‑150 (MQ=255) aTTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGACAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATg > 1:1188102/1‑150 (MQ=255) aTTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGACAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATg > 1:238408/1‑150 (MQ=255) ttttCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGtt < 1:2867948/150‑1 (MQ=255) ttaccGCTTCAACGGGTTGTTTCAGCGGATCTGCAGGATCGTGACCTAACAAGGTAGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTTCAGCGCGTGGATGATGGttt > 1:5100670/4‑150 (MQ=255) ttCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTc > 2:181418/1‑150 (MQ=255) tCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCt < 1:3342542/150‑1 (MQ=255) ccGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTg > 1:4534446/1‑150 (MQ=255) cGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTgg > 2:4686117/1‑150 (MQ=255) cGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTgg > 1:3334147/1‑150 (MQ=255) tCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGtgtg > 1:1888181/1‑150 (MQ=255) tCAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGtgtg > 1:1496590/1‑150 (MQ=255) cAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGa > 1:1280422/1‑150 (MQ=255) cAACGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGa > 1:1950225/1‑150 (MQ=255) aaCGGGTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGAt < 2:3554936/150‑1 (MQ=255) cGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATgg > 1:417337/1‑150 (MQ=255) gggTTGTTTCTGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGt > 1:4234217/1‑150 (MQ=255) ggTTGTTTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTc > 1:2150777/1‑150 (MQ=255) gttTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAAtt < 2:3902110/150‑1 (MQ=255) gttTCAGCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAAtt > 1:2576113/1‑150 (MQ=255) tttCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAAttt < 1:4680094/150‑1 (MQ=255) tttCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAAttt < 2:2476435/150‑1 (MQ=255) ttCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGTTCAATTTg > 1:3734531/1‑150 (MQ=255) aGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCa < 1:3601812/150‑1 (MQ=255) gCGGATCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAg < 2:5259765/150‑1 (MQ=255) aTCGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGc < 1:554803/150‑1 (MQ=255) tCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCa > 1:3550444/1‑150 (MQ=255) cGGCAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCAt < 2:2068716/150‑1 (MQ=255) ggCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCAtt > 1:2665245/1‑150 (MQ=255) ggCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCAtt > 2:3182611/1‑150 (MQ=255) cAGGATCGTGACCTAACACGGTTGACCCTTTCAGACGAGAGCGCCACCAGCCCTCTTGAGTATCGGCAGGCCAGGGTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATGTGCCAGTGGCATTTg < 2:3692321/150‑1 (MQ=255) cAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCATTTg < 2:2138955/150‑1 (MQ=255) cAGGATAGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCATTTg > 2:2038010/1‑150 (MQ=255) aGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCATTTGc > 2:3522248/1‑150 (MQ=255) | GCCAAACGTTTTGTTTATTTGGTCGACAACCGAGCGCGCATCCACGTTTCCCACCACCAGTAGCGTCATTGCATCCGGGGTGTACCATTTCTGATAGAAATCTTTAATTTTTTCCGCTTCAACGGGTTGTTTCAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTGGCATTTGCCAGAT > CP009273/3674581‑3674879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |