| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,779,319 | G→T | 7.5% | E234* (GAA→TAA) | gpmM → | phosphoglycero mutase III, cofactor‑independent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,779,319 | 0 | G | T | 7.5% | 693.6 / 3.3 | 254 | E234* (GAA→TAA) | gpmM | phosphoglycero mutase III, cofactor‑independent |
| Reads supporting (aligned to +/- strand): ref base G (119/103); new base T (6/26); total (125/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 271 total aligned reads displayed.
TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCTTCGC > CP009273/3779170‑3779467 | tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAatgatg < 2:2388431/150‑1 (MQ=255)tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAatgatg < 2:4551435/150‑1 (MQ=255) catTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAAtgatga < 1:1148544/150‑1 (MQ=255) catTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCGGCTTATGCTCGCGACGAAAAtgatga > 1:1553519/1‑150 (MQ=255) tGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAAtt > 2:4577579/1‑150 (MQ=255) tGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAAtt < 2:3773893/150‑1 (MQ=255) tGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAAtt < 1:3622936/150‑1 (MQ=255) tGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAAtt > 2:2728809/1‑150 (MQ=255) ggTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCGTATGCTCGCGACGAAAATGATGAATTc > 2:2279525/1‑150 (MQ=255) ctacGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGc > 1:5200630/1‑150 (MQ=255) ctacGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGc < 2:3276615/150‑1 (MQ=255) tacGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCg < 1:204275/150‑1 (MQ=255) acGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGa < 1:2925485/150‑1 (MQ=255) gcgATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCTGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGAcc < 1:4427560/150‑1 (MQ=255) cgATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAATCGACCg > 1:467846/1‑150 (MQ=255) gATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGt > 2:3909565/1‑150 (MQ=255) ggACCGCGATAACGGTTGGTATCGCGTAGAAAATGCTTATGACCTGCTGACTCTGGCGCTGGGCGAGTTCCTGGCCGATACCGCCGTTGCTGGTTTGCTGGCTGCTTATGCTCGCGACTAAATTGATTAATTCGTGAAAGCGACCGTTAt < 2:4165369/150‑1 (MQ=255) gACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGGTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATc < 2:3478488/150‑1 (MQ=255) aCCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATcc > 2:1699560/1‑150 (MQ=255) cgATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCTGGGCGTGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTTAAAGCGACCGTTATCCGTGc < 2:4204907/150‑1 (MQ=255) cgATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGc > 2:5088988/1‑150 (MQ=255) gATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTTCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCt > 2:2785714/1‑150 (MQ=255) gATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAATCTCGCGACGAAAAAGATGAATTAGTGAAAGCGACCGTTATCCGTGCt > 1:4531136/1‑150 (MQ=255) aTAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTg > 1:1271161/1‑150 (MQ=255) tAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCATATTCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCCTGCTGa > 1:1030634/1‑150 (MQ=255) aaCCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGaa > 2:2912050/1‑150 (MQ=255) gtggggAGCGCGTAGAAAACGCTTATGACCTGCTGACTCGGGCGCTGGGCGTGTTCCAGGCCGATACCGCCGTTGGGGGTTTGCTGGCTGCTTTGGCTCGCGACGAAAATGTTTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTc < 1:2131535/147‑1 (MQ=255) gTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCATGCTGCTTATGCTCGCGACGAAAATGATGAATTATTTAAAGCGACCGTTATCCGTGCTGAAGGTc > 2:252932/1‑150 (MQ=255) gTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTAGTGAAAGCGACCGTTATCCGTGCTGAAGGTc > 2:253043/1‑150 (MQ=255) gTTGGGAGCGCGTAGAAACCGCTTCTGACCGGCTGACTCGGGCGCAGGGCGAGTTCCAGGCCGATCCCGCCGTTGCTGGTTTGCAGGCTGCTTATGCGCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTc < 1:4782756/150‑1 (MQ=255) ttGGTATCGCGTATAAAAAGCTTTTGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGTTTTGCAGGCTGCTTATGCTCGCGACTAAAATTTTTAATTCGTGAACGCGACCGTTATCCGTGCTGAAGGTCa < 1:3934144/150‑1 (MQ=255) tGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAg > 2:635862/1‑150 (MQ=255) ggATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCTGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGcc < 2:4366678/150‑1 (MQ=255) ggATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGcc > 1:2656091/1‑150 (MQ=255) gATCGCGTATAAAAAGCTTATGACCTGCTGACTCTGGCGCTGGGCGTGTTCCAGGCCGATACCGCCGTTGGTGGTTTGCTGGCTGCTTATGCTCGCGACGAAAATGATTAATTCTTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCa < 2:1358777/150‑1 (MQ=255) gATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCa < 2:1725519/150‑1 (MQ=255) aTCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGGTATCCGTGCTGAAGGTCAGCCAg > 1:2703304/1‑150 (MQ=255) tCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATTCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGa > 1:1062320/1‑150 (MQ=255) cgcgTATAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGATTTCCAGGCCTATACCGCCTTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACTAAAATTATTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGAc < 2:2022665/150‑1 (MQ=255) ttaaaatGTTTTTGACGTGTTGACTCGGGCGCTGGGCGTGTTCCTGGCCGATACGGCGTTTGGTGTTTTGCTGGCTGATTTTGCTCGCGACTAAATTGTTTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGc < 1:4214416/148‑1 (MQ=255) gAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCGGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCa > 1:884152/1‑150 (MQ=255) aaaaGCTTTTGACGTGCTTACTCGGGCGCTGGGCGAGTTCCAGGCCGATACCGCGGTTGCTGTTTTGCTGGCTGCTTATGCTCGCGACTAAAATGATTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAAt < 1:3851779/150‑1 (MQ=255) aaaaGCTTATTACTGGCTGACTGTGGCGCTGGGCGTGTACCCGGCCGATCCCGCCTTTGGGGTTTTGCTGGCTGTTTTTGCTGGCGACCAAATTTATTATTTCTTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAAt < 1:1979986/150‑1 (MQ=255) aaaaGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGATGCTTATGCTCGCTACTAAAATGATTAATTCGTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAAt < 2:4739942/150‑1 (MQ=255) aaaaGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCAGGTTTGCATGCTGCTTATGCTCGCGACGAAAATGATTAATTAGTGAAAGCGACCGTTATACGTGCTGAATGTAAGCCAGACGCGGCAAt > 2:1430794/1‑150 (MQ=255) aaaGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGGGGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGTTGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATg > 1:931728/1‑150 (MQ=255) aaGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCGTATGCTCGCGACTACAAAGAGGAATTCGTGAAAGCGACCGTTAGACGTGCTGAAGGTCAGACAGACTCGGCAATgg > 1:1856378/1‑150 (MQ=255) tATGACCTGCTGACTCTGGCGCTGGGCGAGTTCCCGGCCGATACCGCCGTTGCTGGTTTGCTGGCTGCTTATGCTCGCGACGAAAATGATTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGAc < 1:3014052/150‑1 (MQ=255) tGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGTCgg > 2:5316494/1‑150 (MQ=255) aCCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGTTGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGTCGGCg > 1:2614695/1‑150 (MQ=255) gcttACTCGGGCGCAGGGCGAGTCCCTGGCCGATCCCGCGGTTGCTGGTTTGCTGGCTGATTATGCTCGCGATTAAATTTTTTAATTCTTTAACGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGc < 1:1903736/150‑1 (MQ=255) tctGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGAt > 2:4528110/1‑150 (MQ=255) ggCGCTGGGCGTGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTTTGCTCGCGACGAAAATGTTGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGAtttt < 2:3971255/150‑1 (MQ=255) ggCGCTGGGCGAGTTCCAGGCCGATCCCGCGGTTGGTGGTTTGCTGGCTGCTTTTGCTCGCGACTAAAATTATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGAtttt < 1:2053935/150‑1 (MQ=255) gctgggCGTGTTCCAGGCCGATACCGCGGTTGGTGGTTTGCAGGCTGCTTAGGCTCGCGACTAAATTGATGATGTCGTGACCGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCAt < 1:4624676/147‑1 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCTATGGAAGACGGCGATGCACTGATTTTCATGa < 2:3713473/150‑1 (MQ=255) gtgTTCCAGGCCGATACCGCCGTTGCTGTTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATTAATCCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTc < 1:3257991/148‑1 (MQ=255) gAGTTCCCGCCCGATCCCGCCGTTGCTGGTTTGCTGGCTGCTTATGCTCGCGACCAAAATTATGAATCCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTc < 1:1699560/150‑1 (MQ=255) aGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACTAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTcc < 2:384317/150‑1 (MQ=255) aGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTcc < 1:3538044/150‑1 (MQ=255) aGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTcc > 2:2619854/1‑150 (MQ=255) aGTTCCAGGCCGATACCGCCGTTGCTGGTTGGCTGGCTGCTTATGCTCGCGACTAAAATGATGAATTCGTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTcc < 2:40731/150‑1 (MQ=255) tCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTg < 2:1263176/150‑1 (MQ=255) ccggCCTATACCGCGGTTGGTGTTTTGCAGGCTGATTATGCTCGCGACTAAAATGATGATTTCGTCAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCt < 1:3315563/148‑1 (MQ=255) aGGCCGATACCGCCGTTGCTGGTTTTCAGGCTGCTTATGCTCGCGACGAAAATGATGAAATAGTGAAAGCGACCGTTATACCTGCTGAAGGTCAGCCAGACGCGGCCATGGAAGACGGCGATGCACTGATTTTAAAGAAATTACGTGCTg > 1:5028466/1‑150 (MQ=255) aGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTg > 2:5045527/1‑150 (MQ=255) gCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATGCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGAc < 2:695022/150‑1 (MQ=255) cgTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGa > 2:4742709/1‑150 (MQ=255) cgTTGCGGGTTTGCCGGCGGCTTATGCTCGCGACTAAAATTATGAATCCGTGAACGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGa < 1:545001/150‑1 (MQ=255) ttGGTGGTTTGCTGGGTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGaaa < 1:4710677/150‑1 (MQ=255) tGCTGGTTTGCAGGCTGCTTATGCTCGCTACTAAAAGGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAAt < 1:153517/150‑1 (MQ=255) ggtGGTTTGCCGGGTGCTTATGCTCGCGACGAAAAGTATGATTTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATc < 1:3385479/148‑1 (MQ=255) gCTGGTTTGCAGGCTGATTATGCTCGCGACGAAAATGATTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATc < 2:1553519/150‑1 (MQ=255) tGGTTTGCTGGCTGCTTATGCTCGCGACTAAATTGATGATTTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCAc < 1:2789809/150‑1 (MQ=255) tttGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCg > 1:3424076/1‑150 (MQ=255) cAGTCTGATTTTGATCGATACTAAAATTATGATTTCTTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCt < 1:4399921/150‑1 (MQ=255) cAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCt > 2:24088/1‑150 (MQ=255) ggCTTCTTATGCTCGCTACTAAATTTATGAATTCGTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCttt < 1:2672807/150‑1 (MQ=255) gctgctTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTc < 2:2947156/150‑1 (MQ=255) ctgctTAGGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCg < 2:31358/150‑1 (MQ=255) tgctTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGt > 2:4919242/1‑150 (MQ=255) tgctTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGt > 1:5011670/1‑150 (MQ=255) ctTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGa > 2:4251784/1‑150 (MQ=255) ctTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGa > 2:4805634/1‑150 (MQ=255) gCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCt < 2:4192989/150‑1 (MQ=255) tCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGTGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGa > 1:3718091/1‑150 (MQ=255) tCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGa > 2:2037609/1‑150 (MQ=255) gcgACGAAAATTATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGAtt < 2:2097135/150‑1 (MQ=255) gcgACGAAAATGATGAGTTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGAtt > 2:1179935/1‑150 (MQ=255) cgacgaAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGAttt > 1:3492485/1‑150 (MQ=255) gacgaAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGAttta > 1:785353/1‑149 (MQ=255) cgaAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGTTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGa > 2:900746/1‑150 (MQ=255) cgaAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGAAGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGAGCTTACGTGAACGCTGATTTCGa > 1:3063929/1‑150 (MQ=255) gaAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGAt > 1:1370800/1‑150 (MQ=255) aaaaTGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATg < 2:2599750/150‑1 (MQ=255) aaaTGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATgg > 1:56202/1‑150 (MQ=255) aaaTGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATgg > 1:2324275/1‑150 (MQ=255) aaaTGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATgg < 2:1904600/150‑1 (MQ=255) atgatgAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCt < 2:2344828/150‑1 (MQ=255) gatgaATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCTTc > 2:578343/1‑150 (MQ=255) | TCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCTTCGC > CP009273/3779170‑3779467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |