| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,842,467 | C→A | 28.6% | G344W (GGG→TGG) | uhpB ← | sensory histidine kinase in two‑component regulatory sytem with UhpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,842,467 | 0 | C | A | 28.6% | 547.6 / 188.4 | 273 | G344W (GGG→TGG) | uhpB | sensory histidine kinase in two‑component regulatory sytem with UhpA |
| Reads supporting (aligned to +/- strand): ref base C (93/102); new base A (32/46); total (125/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
AATACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAACCGTTCA > CP009273/3842318‑3842615 | aaTACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGccc < 1:5078541/150‑1 (MQ=255)aaTACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGccc > 1:124388/1‑150 (MQ=255)aaTACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGccc > 2:4072489/1‑150 (MQ=255) ccGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGATGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGctc < 1:3313250/150‑1 (MQ=255) cgcgCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGctct < 1:2495622/150‑1 (MQ=255) cgcgCCCTTCCAGCTCCATTTCCCGAATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAACCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGctct < 1:1999076/150‑1 (MQ=255) cgcgCCCTTCCAGCTCCATGTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACACACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGctct < 2:3239238/150‑1 (MQ=255) cgcCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGc > 1:818390/1‑150 (MQ=255) cTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCa > 2:2450259/1‑150 (MQ=255) cccgCTCCACGTCCCGCATCCGCGAGCGGATGGCCTGCTCCCGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGGTCGATGAGCTGCCCGCACTGCTTCACGc < 2:3541228/147‑1 (MQ=255) cAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCt > 1:416366/1‑150 (MQ=255) aTTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACACAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTa > 1:2864845/1‑150 (MQ=255) cccGCATCTGTGTGCGGTTGGCCTGCTCCTGGGTGATATCATCCAAGTGGCGCGGACGTAACCGACCCAACAACCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTg < 1:1844591/150‑1 (MQ=255) cccGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTg < 2:2026721/150‑1 (MQ=255) gCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTgccg < 2:594961/150‑1 (MQ=255) gCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgccg > 2:4542477/1‑150 (MQ=255) aTCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTgccgcc > 2:4619305/1‑150 (MQ=255) aTCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTgccgcc > 2:414288/1‑150 (MQ=255) aTCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTgccgcc > 2:3590888/1‑150 (MQ=255) aGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGc > 2:3035140/1‑150 (MQ=255) gTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGcc < 1:1322430/150‑1 (MQ=255) tGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCg > 1:2574373/1‑150 (MQ=255) tGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCg > 2:4904754/1‑150 (MQ=255) gAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGc > 1:162487/1‑150 (MQ=255) gAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGc > 2:3468816/1‑150 (MQ=255) aGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACGGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCt < 1:4389277/150‑1 (MQ=255) cGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGa > 2:2689926/1‑150 (MQ=255) cGGATGGCCTGCTCCAGGGTGAGAGCATCCAACTTGCGCTGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGa > 1:5258020/1‑150 (MQ=255) ggAGGGCCTGCTCCCGGGTGAGATCATCCAACGGGCGCGGACGTAACCGACCCAACAACCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGaa < 1:2812782/150‑1 (MQ=255) gATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAAc > 2:4295681/1‑150 (MQ=255) gATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAAc < 1:4218642/150‑1 (MQ=255) ggCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAAt < 1:629820/150‑1 (MQ=255) ggCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAAt > 1:5098872/1‑150 (MQ=255) gCTCCCGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACTCACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCg < 2:1750955/150‑1 (MQ=255) ccAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCt > 1:4833479/1‑150 (MQ=255) cAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTg < 2:2192471/150‑1 (MQ=255) tgggTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGa < 1:1028434/149‑1 (MQ=255) gggTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCt < 2:2369964/119‑1 (MQ=255) gggTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCt > 1:2369964/1‑119 (MQ=255) gggTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACACTGCCCGCCTGAg > 2:3683063/1‑150 (MQ=255) tGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACACCCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTAc < 1:1459813/150‑1 (MQ=255) tGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTAc < 2:4369444/150‑1 (MQ=255) gaTCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGaa > 1:2041611/1‑150 (MQ=255) gaTCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGaa > 2:3855035/1‑150 (MQ=255) cAACTGGCGCGGACGTAACCGACCCAACAACCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTAGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGt < 1:1784653/150‑1 (MQ=255) aCTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGa > 1:5197257/1‑150 (MQ=255) cTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGAt < 2:3894182/150‑1 (MQ=255) cTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGAt < 1:2619589/150‑1 (MQ=255) cTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGAt < 2:4692434/150‑1 (MQ=255) tGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATg < 2:1388396/150‑1 (MQ=255) ggCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATgg > 1:3815630/1‑150 (MQ=255) ggCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATgg < 2:473754/150‑1 (MQ=255) cgcgGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTc < 2:4962224/150‑1 (MQ=255) gcgGACGTAACCGACCCAACACACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCt < 2:5104933/150‑1 (MQ=255) gcgGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCt < 1:611920/150‑1 (MQ=255) cgGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTg > 1:5210196/1‑150 (MQ=255) aCGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGAcc < 1:4294834/150‑1 (MQ=255) aCCGACCCAACAAACGGCGCATCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGatat < 2:5201906/150‑1 (MQ=255) gACCCAACACACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATatcat < 2:4740106/150‑1 (MQ=255) cccAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGAAGAGCTGCCCGCTCTGCTTCCCGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATCtcatca < 2:4038320/150‑1 (MQ=255) acaaACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCa > 2:1130241/1‑150 (MQ=255) acaaACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCa > 1:4015344/1‑150 (MQ=255) caaACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAg > 2:4481188/1‑150 (MQ=255) aaaCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGc > 2:693514/1‑150 (MQ=255) aaCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCTCGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCTTGCAGCt > 2:3982416/1‑150 (MQ=255) aaCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCt > 2:1889140/1‑150 (MQ=255) aaCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCt < 1:3961923/150‑1 (MQ=255) agggCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCTCGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTc < 1:4951963/148‑1 (MQ=255) cGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCa < 2:4276429/150‑1 (MQ=255) gcgcACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCAcg > 1:1909773/1‑150 (MQ=255) gcACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCAcgcg < 2:4841700/150‑1 (MQ=255) aCCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGcc > 2:3306936/1‑150 (MQ=255) aCCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGcc < 2:800384/150‑1 (MQ=255) cgcgTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCcac > 1:1503998/1‑150 (MQ=255) cgtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACAt < 1:3468816/150‑1 (MQ=255) cgtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACAt > 2:4204321/1‑150 (MQ=255) cgtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACAt < 1:4681699/150‑1 (MQ=255) gtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGTCGTTATCTGCCGCCAGGCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATc < 2:3234670/150‑1 (MQ=255) gtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATc > 1:2984547/1‑150 (MQ=255) gtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACg > 1:994386/1‑150 (MQ=255) tAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACgg > 1:1016884/1‑150 (MQ=255) tAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACgg > 1:565432/1‑150 (MQ=255) aaaCGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCGTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGgc < 1:1485870/150‑1 (MQ=255) gCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCAc < 1:4456524/150‑1 (MQ=255) cccAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACg < 1:5298371/150‑1 (MQ=255) cAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGct > 2:2514044/1‑150 (MQ=255) gATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctct > 1:2877880/1‑150 (MQ=255) gATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctct < 2:2741027/150‑1 (MQ=255) gATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctct < 1:4435654/150‑1 (MQ=255) agaGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCtt < 2:2939041/148‑1 (MQ=255) tAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTc < 1:3122048/150‑1 (MQ=255) tCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTcc < 1:4513143/150‑1 (MQ=255) cGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCa > 2:5013895/1‑150 (MQ=255) gATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAg > 2:2774166/1‑150 (MQ=255) gATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAg < 2:1286371/150‑1 (MQ=255) gATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAg > 1:1668850/1‑150 (MQ=255) aTGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGc < 2:1521959/150‑1 (MQ=255) aGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAAc > 2:656811/1‑150 (MQ=255) tGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCGTCGGTTTCCAGCAACCGt > 2:207622/1‑150 (MQ=255) gCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCACCCGtt > 2:1964053/1‑150 (MQ=255) | AATACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAACCGTTCA > CP009273/3842318‑3842615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |