| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,886,162 | T→G | 8.6% | L13R (CTG→CGG) | yidZ → | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,886,162 | 0 | T | G | 8.6% | 676.2 / 54.5 | 253 | L13R (CTG→CGG) | yidZ | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (129/101); new base G (12/10); total (141/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 272 total aligned reads displayed.
GCGGTGGTTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGT > CP009273/3886013‑3886311 | ggtggtTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCtgctgc > 2:1863544/1‑150 (MQ=255) tggttggtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCtt > 2:532080/1‑150 (MQ=255) ttggtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCTCGCTTGATCTCAATCTGCTGCTTTGt < 1:20059/150‑1 (MQ=255) tggtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTc > 1:1402258/1‑150 (MQ=255) gtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTg > 1:4970441/1‑150 (MQ=255) aTCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCa > 1:2113595/1‑150 (MQ=255) aTCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCa < 2:679141/150‑1 (MQ=255) ggCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCt > 2:2198805/1‑144 (MQ=255) cATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAActgctg > 1:1689865/1‑150 (MQ=255) aTGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGa > 1:5120017/1‑150 (MQ=255) gAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGc < 1:2873396/150‑1 (MQ=255) gAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGc > 2:4243600/1‑150 (MQ=255) aaTATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCa > 2:1978382/1‑150 (MQ=255) tGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAg < 1:4800258/150‑1 (MQ=255) tGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAg > 2:1150905/1‑150 (MQ=255) tGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAgcgc > 2:4360535/1‑150 (MQ=255) gATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCa > 1:5321357/1‑150 (MQ=255) gggATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGt > 2:2155809/1‑150 (MQ=255) gATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTaa > 1:4382860/1‑150 (MQ=255) aTTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAAc > 2:4945249/1‑150 (MQ=255) aTTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAAc > 2:3872261/1‑150 (MQ=255) aTTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAAc > 1:3302850/1‑150 (MQ=255) tGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCaaa < 1:1852276/150‑1 (MQ=255) aTTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgc < 1:4029922/150‑1 (MQ=255) ttGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcg > 2:2600192/1‑150 (MQ=255) ttGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcg < 2:1549119/150‑1 (MQ=255) tGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcgg < 1:4449220/150‑1 (MQ=255) gCCTGTAGCAGAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcggc < 2:2572642/150‑1 (MQ=255) tAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGc > 1:2500323/1‑150 (MQ=255) aTAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGAt < 1:3462594/150‑1 (MQ=255) aGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATaa > 1:4354803/1‑150 (MQ=255) tGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAAc < 1:4577924/150‑1 (MQ=255) gAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACg > 1:4304633/1‑150 (MQ=255) gAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACg > 2:691785/1‑150 (MQ=255) gAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCACATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACg < 1:2705846/150‑1 (MQ=255) tGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCt < 1:3782208/150‑1 (MQ=255) tGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCt < 1:1068661/150‑1 (MQ=255) cTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTc > 1:767087/1‑150 (MQ=255) tttttATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGTTCTCAATCTGCGGCTTTGTCTGCAACTGGTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTcg < 1:4179349/147‑1 (MQ=255) tGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAATCGGCGAAGC‑GGATAAACGTGACACCTAcg > 1:3481224/1‑150 (MQ=255) gATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTcgg > 1:3120902/1‑150 (MQ=255) ttATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTcggcg > 1:2166696/1‑150 (MQ=255) aTGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGt < 2:902347/150‑1 (MQ=255) gTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGa < 2:3869337/150‑1 (MQ=255) gTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGa > 2:4770291/1‑150 (MQ=255) ttCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAg < 2:4638033/150‑1 (MQ=255) tcgCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAg < 1:3244315/150‑1 (MQ=255) cgcgCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGt > 1:5062999/1‑150 (MQ=255) gcgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTc < 1:807815/150‑1 (MQ=255) gcgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTc > 1:62228/1‑150 (MQ=255) cgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCCATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCg < 1:13952/150‑1 (MQ=255) cgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCg < 2:4446477/150‑1 (MQ=255) cgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCg > 1:4091688/1‑150 (MQ=255) ccTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCt < 2:3464320/150‑1 (MQ=255) tGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTgg > 2:1214887/1‑150 (MQ=255) ggACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGc > 2:862392/1‑150 (MQ=255) gCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCCATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAg < 1:1616331/150‑1 (MQ=255) gCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAg > 2:5059273/1‑150 (MQ=255) ccccGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGt < 1:2513123/150‑1 (MQ=255) cccGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGtt > 1:872009/1‑150 (MQ=255) cccGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGtt > 2:2453257/1‑150 (MQ=255) ttGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAaga < 1:4813686/150‑1 (MQ=255) tGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAagag > 1:672897/1‑150 (MQ=255) gCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGc < 1:3044018/150‑1 (MQ=255) ccGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCCGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCg < 2:3684837/150‑1 (MQ=255) cGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGt > 2:2338843/1‑150 (MQ=255) cGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGt > 1:2844188/1‑150 (MQ=255) cGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGt > 1:570856/1‑150 (MQ=255) cTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTgg < 1:2561080/150‑1 (MQ=255) tcttGAAGAAATACATCACCACGCTTGATCTCTATCTGCTGCTTTGTCTGGAACTGCTGTTGCAGGAGCGCAGCGTATCCAAAGCGGCGAAGC‑GGTTAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTTAGAGCGTGGt < 1:5242130/147‑1 (MQ=255) tCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGt < 2:3182024/150‑1 (MQ=255) cATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGtt > 1:1556285/1‑150 (MQ=255) cATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGtt > 2:101720/1‑150 (MQ=255) aTGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCACAGTTAAGAGCGTGGttt > 1:2452999/1‑150 (MQ=255) aTGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGttt < 1:2933176/150‑1 (MQ=255) tGAAGAAATCCATCACCACGCTTGATCTCATTCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTg < 2:162699/150‑1 (MQ=255) tGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTg < 1:887018/150‑1 (MQ=255) gaagaaATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTga < 2:1492243/150‑1 (MQ=255) gaagaaATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTga < 1:1327637/150‑1 (MQ=255) tCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCg < 2:4970441/150‑1 (MQ=255) ccATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGc > 2:2861250/1‑150 (MQ=255) cATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGct > 1:2321347/1‑150 (MQ=255) caccacGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCACAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCtt < 2:1986655/150‑1 (MQ=255) caccacGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCtt > 2:4709272/1‑150 (MQ=255) ccacGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTtg < 2:1689865/150‑1 (MQ=255) cacGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTtgt > 2:1126560/1‑150 (MQ=255) acGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGACGCTGGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTtgt < 2:1007457/150‑1 (MQ=255) gCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGaa < 2:2040618/150‑1 (MQ=255) cTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAAc > 1:1142588/1‑150 (MQ=255) ttGATCTCACTCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACt < 2:3645813/150‑1 (MQ=255) ttGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACt < 2:3137005/150‑1 (MQ=255) gATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCa > 1:1534763/1‑150 (MQ=255) tctcAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCAcc < 1:3714117/150‑1 (MQ=255) ctcAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCg > 2:2675792/1‑150 (MQ=255) ctcAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCg > 2:480928/1‑150 (MQ=255) aaTCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTCAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCtc > 2:4127164/1‑149 (MQ=255) ctgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTg > 2:1401264/1‑150 (MQ=255) ctgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTg > 2:3281760/1‑150 (MQ=255) ctgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTg > 2:3425546/1‑150 (MQ=255) tgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGt > 1:1460999/1‑150 (MQ=255) | GCGGTGGTTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGT > CP009273/3886013‑3886311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |