| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,895,987 | T→G | 18.1% | I359L (ATT→CTT) | bglB ← | cryptic phospho‑beta‑glucosidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,895,987 | 0 | T | G | 18.1% | 648.3 / 169.4 | 334 | I359L (ATT→CTT) | bglB | cryptic phospho‑beta‑glucosidase B |
| Reads supporting (aligned to +/- strand): ref base T (109/164); new base G (36/25); total (145/189) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.72e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 358 total aligned reads displayed.
CCAACTGGTGTACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTT > CP009273/3895838‑3896135 | aCTGGTGTACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACaataaa > 1:4745202/1‑150 (MQ=255) cTGGTGTACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACaataaat < 2:1262544/150‑1 (MQ=255) ggTGTACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAataaataa < 1:1075179/150‑1 (MQ=255) gtgtACCCAATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAAc < 1:5063495/150‑1 (MQ=255) gtgtAACCCATAATATCCACAACATCTGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAAc < 1:4301434/150‑1 (MQ=255) tgtACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACg < 1:4585598/150‑1 (MQ=255) gtACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACgg < 2:1357736/150‑1 (MQ=255) ccccATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGttt < 1:2007175/150‑1 (MQ=255) cATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTg < 1:2430878/150‑1 (MQ=255) cATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTg > 1:1981957/1‑150 (MQ=255) ataataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGa < 1:161107/150‑1 (MQ=255) taataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGAt < 2:2668531/150‑1 (MQ=255) taataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGAt < 2:4201512/150‑1 (MQ=255) taataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGAt < 1:2514021/150‑1 (MQ=255) taataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGAt < 1:149764/150‑1 (MQ=255) aataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATa < 2:65300/150‑1 (MQ=255) aataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATa < 1:3966487/150‑1 (MQ=255) aataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATa < 1:4451488/150‑1 (MQ=255) aataTCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCACTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATa > 1:623761/1‑150 (MQ=255) atatCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATaa < 1:1390320/150‑1 (MQ=255) atatCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATaa < 1:1738490/150‑1 (MQ=255) atatCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATaa < 1:76042/150‑1 (MQ=255) tatCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAAc < 1:328789/150‑1 (MQ=255) acacCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCATCGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATcc > 2:2402728/1‑150 (MQ=255) acacCATCGGCAATCGCTTCATTGACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATcc < 2:4425915/150‑1 (MQ=255) cacCATCGGCAATCGATTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCATTTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACTATAAATAACGGTTTTTGATAACGATccc < 2:1984722/150‑1 (MQ=255) acCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCa < 1:5163915/150‑1 (MQ=255) aTCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAg > 1:1954622/1‑150 (MQ=255) aTCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAg > 2:334600/1‑150 (MQ=255) cAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTAt > 1:4672096/1‑150 (MQ=255) cAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTAt < 1:4235095/150‑1 (MQ=255) cAATCGCTTCATTTACCTGGACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTAt < 2:2320095/150‑1 (MQ=255) aaTCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTAtt < 1:2234094/150‑1 (MQ=255) aaTCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTAtt > 2:3598144/1‑150 (MQ=255) aTCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTAttt < 1:747246/150‑1 (MQ=255) tCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTa < 1:5255909/150‑1 (MQ=255) gCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAAc < 1:569956/150‑1 (MQ=255) ttCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAg > 2:1777064/1‑150 (MQ=255) tCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGa > 1:4934663/1‑150 (MQ=255) tACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCg < 1:1207600/150‑1 (MQ=255) aCCAGGTTATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTATTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCa < 2:268031/150‑1 (MQ=255) aCCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACACGTAATCCa > 1:4960722/1‑150 (MQ=255) cAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAAc > 1:3821954/1‑150 (MQ=255) tGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGa > 2:1917275/1‑150 (MQ=255) gATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGAt < 2:3430893/150‑1 (MQ=255) tCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCa > 2:4249260/1‑150 (MQ=255) gTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAAt > 2:2921985/1‑150 (MQ=255) aaTAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGcc > 2:5149865/1‑150 (MQ=255) aTAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCa > 2:4776566/1‑150 (MQ=255) aGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCAcc < 2:3515836/150‑1 (MQ=255) ggCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCAccc < 2:1526724/150‑1 (MQ=255) cAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCAccccc < 1:1043220/150‑1 (MQ=255) cGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCActct < 2:5090132/150‑1 (MQ=255) gATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTg > 1:778712/1‑150 (MQ=255) aTCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACt > 1:975791/1‑150 (MQ=255) aTCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACt < 2:1139975/150‑1 (MQ=255) cGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACttt < 1:3383193/150‑1 (MQ=255) gTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACtttt < 1:2875164/150‑1 (MQ=255) gTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACtgtt > 2:4575514/1‑150 (MQ=255) tCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTc < 2:330452/150‑1 (MQ=255) ccTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCa > 2:4885285/1‑150 (MQ=255) gAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGa < 1:1366968/150‑1 (MQ=255) aCCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGAtt > 1:3199610/1‑150 (MQ=255) cATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTgg > 2:1062310/1‑150 (MQ=255) tCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTgggg < 2:2102029/150‑1 (MQ=255) ccGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGa > 2:2208961/1‑150 (MQ=255) cGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGAt < 2:1640465/150‑1 (MQ=255) ttCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCat > 2:853899/1‑150 (MQ=255) aaCGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATAtt < 2:2018650/150‑1 (MQ=255) tGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGtg < 1:1247387/150‑2 (MQ=255) tGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTa < 1:3002260/150‑1 (MQ=255) gTCTTTTGCGCCTAATCCGTTCTCGACAATAAATCACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTAt < 2:2636585/150‑1 (MQ=255) gTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTAt > 2:3867542/1‑150 (MQ=255) gTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTAt > 2:2124581/1‑150 (MQ=255) gTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTAt < 1:2742297/150‑1 (MQ=255) gTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATACAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTAt > 1:2663365/1‑150 (MQ=255) gTCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTAt < 1:885653/150‑1 (MQ=255) tCTTTTGCGCCTAATCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATg < 2:4934663/150‑1 (MQ=255) cTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGt > 1:3497059/1‑150 (MQ=255) ttGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTAGc < 2:2552829/150‑1 (MQ=255) tGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGcc < 1:1899979/150‑1 (MQ=255) gcgcCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGccc > 1:3312066/1‑150 (MQ=255) ccTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTgc < 2:3243262/150‑1 (MQ=255) tAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTgcgc > 2:4584907/1‑150 (MQ=255) aaTCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCa > 1:3526196/1‑150 (MQ=255) aTCCGTTCTCGACAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCAt > 1:3164276/1‑150 (MQ=255) tCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCAtt < 1:4385888/150‑1 (MQ=255) gTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCAttttt > 1:3584280/1‑150 (MQ=255) tctcGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTttat < 2:3002291/150‑1 (MQ=255) ctcGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTAGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCCTTTttatt > 1:5003632/1‑150 (MQ=255) gACAATAACTCACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAAt < 1:4816683/150‑1 (MQ=255) gACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAAt < 1:2712306/150‑1 (MQ=255) gACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAAt > 2:1701066/1‑150 (MQ=255) aCAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATg < 2:527336/150‑1 (MQ=255) cAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGc < 2:3927114/150‑1 (MQ=255) cAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGc > 1:3120978/1‑150 (MQ=255) cAAGAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGc > 2:4505658/1‑150 (MQ=255) aataaataACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCt > 1:1835932/1‑150 (MQ=255) ataaataaCGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCtt > 2:3723411/1‑150 (MQ=255) ataaataaCGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCtt > 1:4142851/1‑150 (MQ=255) | CCAACTGGTGTACCCCATAATATCCACACCATCGGCAATCGCTTCATTTACCTGTACCAGGTGATCGTTTAAATAGGCAATTCGATAATCGTCCTGTATCGAACCATCCGCTTCAACGCTGTCTTTTGCGCCTAATCCGTTCTCGACAATAAATAACGGTTTTTGATAACGATCCCAAAGCGTATTTAACAGAACCCGTAATCCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTT > CP009273/3895838‑3896135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |