| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,901,867 | T→G | 6.2% | intergenic (‑141/+42) | pstB ← / ← pstA | phosphate transporter subunit/phosphate transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,901,867 | 0 | T | G | 6.2% | 590.9 / 8.8 | 277 | intergenic (‑141/+42) | pstB/pstA | phosphate transporter subunit/phosphate transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (152/100); new base G (6/19); total (158/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.71e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 294 total aligned reads displayed.
CATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGC > CP009273/3901718‑3902016 | cATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct > 2:235424/1‑150 (MQ=255)cATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct > 2:2183885/1‑150 (MQ=255)cATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct > 1:4235988/1‑150 (MQ=255)cATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCcact > 2:4050905/1‑150 (MQ=255) aTACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTg > 2:779977/1‑150 (MQ=255) tACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgg > 1:159697/1‑150 (MQ=255) aTTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCTTTCACGCCGCATCCGGCAAAGTGTTAACAGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCTCCCCTCTGGGg‑aga > 2:1077066/1‑150 (MQ=255) aTTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGg‑aga > 1:2898297/1‑150 (MQ=255) tGCAATCTTGTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAgg < 2:1483425/150‑1 (MQ=255) tGCAATCTCTGCCACCACGCGCCAGAGGCACTTCGCGAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCCAAGTGTTAACCGTGTACAGAGTCAACAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAgg < 2:1138116/150‑1 (MQ=255) gCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAggg < 2:3614606/150‑1 (MQ=255) aTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCCAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTa > 1:5177377/1‑150 (MQ=255) tCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAg > 1:109678/1‑150 (MQ=255) cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAgg > 1:903268/1‑150 (MQ=255) gtttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAggg < 1:1271047/149‑1 (MQ=255) ttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCGCTGGGG‑AGAGGGTTAGGGTg > 1:2267590/1‑150 (MQ=255) ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGGTAGGGTGAg > 2:467553/1‑150 (MQ=255) cTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAgg > 1:3857819/1‑150 (MQ=255) aTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCCAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGa > 2:2671602/1‑150 (MQ=255) cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGaaa > 2:3240871/1‑150 (MQ=255) tGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAAc > 2:5300647/1‑150 (MQ=255) tGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAAc > 2:4382783/1‑150 (MQ=255) aTGCTCTTCGCTAATCAGGCTTACCGTTGGCCGGATCAGGCGTTCACGCCGCATCCGGCATTGTGTTAACGGTGTACTGTTTCAAAATGGCGCTGGGTGGGTCCCCTCGCCCCTCTGGGG‑AGTGGGTTTGGGTGAGGGGAAAACCGTGTc < 2:2768062/150‑1 (MQ=37) aTGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAACACCGTGTc > 2:1759313/1‑150 (MQ=255) aTGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTc > 1:4026807/1‑150 (MQ=255) tccACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGGTCGGGTGAGGGGAAAACCGTGTCa > 2:1493489/3‑150 (MQ=255) aCTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCGTCTGGGG‑AGAGGGTTCGGGTGAGGGGAAAACCGTGTCAGCa > 2:3961493/1‑150 (MQ=255) aCTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCa > 1:3489793/1‑150 (MQ=255) cTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCaa > 1:4398709/1‑150 (MQ=255) ttCGCTAATCAGGCTTACCGTCGGCCGGATCAGGCGTTCACGCCGCATCCGGCAATGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAat < 2:3182190/150‑1 (MQ=255) cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat > 2:4408191/1‑150 (MQ=255) tAATCTGGCTTCCCGTTGGCGGGATCTGGCGTTCCCGCCGCATCCGTAATTGTGTTAACGGTTTCCAGATTCAAAACGGCGCGCGGTCGGCCCCCGCGCCCCTGGGGGG‑TGTGGTTTTGGGTGTGGGCAAAACCGTGTCAGCAATATCaa < 2:1520877/150‑1 (MQ=255) aaTCAGGCTTACCGTCGGCCGGATCAGGCGTTCCCGCCGCATCCGGAAAAGTGTTAACCGTGTACAGTGACAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGTGGTTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAAc < 2:2630664/150‑1 (MQ=38) aaTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCagc > 2:3953315/1‑148 (MQ=255) aTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCACGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAcc > 2:3376885/1‑150 (MQ=255) aTCAGGCTACCCGTAGGCCGTATCAGGCTTTCACGCCGCATCCGTAAAATTTTTAACCGTGTACAGAGTAAAAAAGGCGCTCGGTCGGTCCCCTCCCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAcc < 2:4267152/150‑1 (MQ=37) tctggCTTACCGTTGGCCGGATCTGGCGTTCAGGCCGCATCCGGCAATGTGTTAACCGTGTACAGCGCCAAAACGGCGCTCGGGGGGCCCCCCCGCCCCTCGGGGG‑AGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCg < 2:4351430/147‑1 (MQ=255) tCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCg > 1:1784865/1‑150 (MQ=255) cTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGttt > 2:5167022/1‑150 (MQ=255) attACCTTAGGCCTCATAATGCTTTACCGCCGCATCCGTAAAAGTGTTAACCGTGTAAATAGTAAAAAAGGCGCTCGTTCGTTCCCATCGCCCATCGGGGT‑AGAGTGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGttt < 2:152175/149‑1 (MQ=255) ttACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTa > 2:3724733/1‑150 (MQ=255) tACCGTAGGCCGGATCAGGCGTGCACGCCGCATCCGGCAAAGTGTTAACCGTGTCCAGAGTCACAAAGGCGCTCGGGCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAt < 2:4867276/150‑1 (MQ=255) aCCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGCCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAtt > 1:566250/1‑150 (MQ=255) gTAGGCCGGATCTGGCGTTCCCGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttctt < 1:3989082/150‑1 (MQ=255) gTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGGTAGGGTGAGGGGAAAACCGTGTCAGCAAGATCAACCGTGTTTAttctt > 2:1805041/1‑150 (MQ=255) ggCGGGATCAGGCGTTCACGCGGCATCCGGCAATGTTTTAACCGTGTACAGAGTCAAAATGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑TGCGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGc < 2:2711097/150‑1 (MQ=255) cttgATCTGGTGTTCAGGCCGCATCGTGAAATGTGTTAACGGTGACCTGAGTAAAAACGGCGCTGGGTCGGTCCCC‑CGGCCCTGGGGGGTTGTGTTTTTGGGTGGGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaa < 2:1967690/147‑1 (MQ=255) ccggCGTTCACGCCGAATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAATGGCGCTCGGTCGGGCCCCTCGCCCCTCTGGGG‑AGTGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaacaa < 2:1198186/148‑1 (MQ=39) tggCGTCCCCGCGCCAGCCGGCAATGTTTAAACGGTGTACATATTAAAAACGGCGCTCGGTGGGCCCCCGCCCCCCTGGGGGT‑TGTGGTTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaacaac < 1:2142748/149‑1 (MQ=255) ggCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcg > 2:3429980/1‑150 (MQ=255) gTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcgc > 2:2641717/1‑150 (MQ=255) cACGCCGCATCCGGCAAAGTGTTAACCGTGTACCGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGcc > 2:1921709/1‑150 (MQ=255) aCGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGCGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa < 2:3889820/150‑1 (MQ=255) ccgcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGaa > 1:2752902/1‑150 (MQ=255) cgcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAAt < 2:2878383/150‑1 (MQ=255) gcATCCGGCAACGTGTTAACGGTGTCCATAGTCAAAAAGGCGCGGGGTCGGTCCCCTCGCCCCTGTGGGT‑TGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATg < 2:2497633/150‑1 (MQ=255) aTCCGGAAATGTGTTAACGGTGTACTTATTCAAAATGGCGCCCGGTCGGTCCCATCGCCCCTGTGGGG‑TGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGtt < 1:2788055/150‑1 (MQ=255) gCAAAGTGTTAACCGTGTACAGAGTC‑AAAAGGCGCTCGGTCGGTCCCCTAGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag < 1:136047/150‑1 (MQ=255) cAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTCGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag > 2:4941384/1‑150 (MQ=255) aGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagcag > 2:2584667/1‑150 (MQ=255) tgtTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 2:2099407/1‑150 (MQ=255) tgtTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:4968643/1‑150 (MQ=255) ttAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGCCCCCCCGCCCCTCTGGGG‑TGAGGTTTTGGGTGTGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACg < 1:65712/150‑1 (MQ=255) aCCGTGTACAGAGTCAAAAAGGCGCTCGTTATGTCCCCTCGACCCTCGGTGC‑AGAGGGTTAGGGTGATGGGAAAACAGAGTCAGCAATATAAACCGTGTTTATTCAACGCAAAAACAACGCTCGCCAGAATGTTAAGCAGCAGTACGcac > 2:616298/1‑150 (MQ=255) aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcac > 1:3320921/1‑150 (MQ=255) tACAGAGTCAAAACGGCGCTCGGTCGGCCCCCTCGCCCCGCGGGGG‑AGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa < 2:4633332/150‑1 (MQ=255) aCAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTaa > 1:71922/1‑150 (MQ=255) cAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt < 2:197587/150‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATg > 2:4996584/1‑150 (MQ=255) accctCAAAACGGCGCTGGGGCGGCCCCCTCCCCCCTGGGGGT‑TGTGGTTTTGGGTGTGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATg < 1:1034411/146‑1 (MQ=255) agTCAAAAAGGCGCTCGGTCGGTCCCCACGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGAt < 1:3376885/150‑1 (MQ=255) gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAATAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATc > 2:4014320/1‑150 (MQ=255) tCAAACCGGGGCTGGGTGGGCCCCCGCGCCCCTGTGGGT‑TGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa < 1:2469056/150‑1 (MQ=255) tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa > 1:4827482/1‑150 (MQ=255) tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa > 1:4726909/1‑150 (MQ=255) tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa < 1:3276507/150‑1 (MQ=255) aaaacGGCGCTGGGTCGGTCCCCGCGCCCCTCTGGGT‑TGTGGTTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAAt < 2:3632074/150‑1 (MQ=255) aaaaaGGCGCTCGGTCGGTCCCCTCGCCCCTATGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAAt < 2:1747110/150‑1 (MQ=255) aaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAc < 1:3202890/150‑1 (MQ=255) aGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc > 1:2028656/1‑150 (MQ=255) aGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc > 2:4579869/1‑150 (MQ=255) gcgcTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCg > 1:3656805/1‑150 (MQ=255) ggtcggtcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTCATGATCAATACCCCGGCCCAg > 2:3464346/1‑150 (MQ=255) ggtcggtcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAg > 2:92521/1‑150 (MQ=255) gtcggtcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAgg < 2:1286619/150‑1 (MQ=255) ggtcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCa > 1:4678552/1‑150 (MQ=255) ggtcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCa > 1:5011547/1‑150 (MQ=255) ggtcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCa > 1:5011647/1‑150 (MQ=255) tcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt < 1:3004838/150‑1 (MQ=255) tcCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt < 1:2203584/150‑1 (MQ=255) cccGCGCCCCGGGGGGG‑TGTGGGTTGGGGTGGGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtg < 1:447986/150‑1 (MQ=255) ccTCGCCCCTCGGGGG‑AGAGGGTTCGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgc < 2:2938279/150‑1 (MQ=255) cgcGCCCCTCTGGGG‑TGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct < 2:4496413/148‑1 (MQ=255) gCCCCTCTGGGG‑TGTGGGTTTGGGTGTGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAAGGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGcc < 2:1586833/150‑1 (MQ=255) cccccTCTGGGG‑AGTGGTTTTGGGTGCGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGcc < 1:4131676/149‑1 (MQ=255) ccccTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCa > 2:2817692/1‑150 (MQ=255) cccTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCAt > 1:2522210/1‑150 (MQ=255) ccTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCCACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGACTGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCAtt < 2:1339365/150‑1 (MQ=255) ccTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCAtt < 2:4781224/150‑1 (MQ=255) tctGGGG‑AGAGGGTTTGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTcc < 2:3142723/150‑1 (MQ=255) | CATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGG‑AGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGC > CP009273/3901718‑3902016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |