| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,902,074 | C→A | 5.0% | M242I (ATG→ATT) | pstA ← | phosphate transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,902,074 | 0 | C | A | 5.0% | 1376.9 / 23.8 | 360 | M242I (ATG→ATT) | pstA | phosphate transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (173/168); new base A (11/8); total (184/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 371 total aligned reads displayed.
TTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTCCACTTCGG > CP009273/3901925‑3902223 | cGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGcatcat > 2:2884861/1‑150 (MQ=255) cGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGcataat < 1:4526039/150‑1 (MQ=255) aaaaaCAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTc > 1:4351529/1‑150 (MQ=255) aaaaaCAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTc < 2:2531672/150‑1 (MQ=255) aacGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCt < 1:483650/150‑1 (MQ=255) aacGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCt > 2:2159637/1‑150 (MQ=255) gcgcgcCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCa > 1:5170850/1‑150 (MQ=255) gcCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAAc > 2:932219/1‑150 (MQ=255) ccAGAATGTTCAGCAGCAGTACGCACAGGGTATTGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACt < 1:5246793/150‑1 (MQ=255) ccAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACt < 1:3724733/150‑1 (MQ=255) ccAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACt > 1:689842/1‑150 (MQ=255) ccAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACt > 1:689937/1‑150 (MQ=255) ccAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACt > 1:1417350/1‑150 (MQ=255) cAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTg < 1:1759313/150‑1 (MQ=255) cAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTg < 1:2647580/150‑1 (MQ=255) cAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTg < 1:3968161/150‑1 (MQ=255) cAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCAGTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTg < 2:3085931/150‑1 (MQ=255) aGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTgg < 2:2264632/150‑1 (MQ=255) aGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTgg > 1:1196441/1‑150 (MQ=255) gAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGt > 1:1135989/1‑150 (MQ=255) aaTGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGtt < 2:3490927/150‑1 (MQ=255) ttCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGgag < 2:5062401/150‑1 (MQ=255) ttCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGgag > 2:2345219/1‑150 (MQ=255) gcagcagTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAgcg < 2:2752902/150‑1 (MQ=255) gcagTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCgg < 1:1493176/150‑1 (MQ=255) gcagTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCgg < 2:71922/150‑1 (MQ=255) agTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTa > 2:3919020/1‑150 (MQ=255) gTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTaa > 1:592254/1‑150 (MQ=255) aCGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAAc < 2:1941785/150‑1 (MQ=255) cGCACAGGGTAATGATCAAAACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGATGGAGAGCGCGGTAAAca > 2:3378916/1‑150 (MQ=255) gggTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAgcg > 1:4171372/1‑150 (MQ=255) ggTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAgcgg > 1:2318507/1‑150 (MQ=255) gTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAgcggc > 1:1866109/1‑150 (MQ=255) gTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAgcggc > 2:2673774/1‑150 (MQ=255) aaTGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGgcgc > 1:3768595/1‑150 (MQ=255) aTGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGcgcg > 2:1750567/1‑150 (MQ=255) aaTACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCa < 2:5011647/150‑1 (MQ=255) ggCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAAt > 2:4705072/1‑150 (MQ=255) gCCCAGGCCAAGTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATa < 2:4212988/150‑1 (MQ=255) cccAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATAc < 1:2716501/150‑1 (MQ=255) cccAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATAc < 1:3953567/150‑1 (MQ=255) ccAGGCCAATTGATGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACg < 1:388449/150‑1 (MQ=255) cAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACgg > 2:4392912/1‑150 (MQ=255) ccAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCaa < 2:4827482/150‑1 (MQ=255) cAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAAt < 1:3417366/150‑1 (MQ=255) cAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAAt > 2:3473692/1‑150 (MQ=255) aaTTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATc < 1:2910201/150‑1 (MQ=255) aaTTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATc > 1:1680152/1‑150 (MQ=255) aaTTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATc < 2:566250/150‑1 (MQ=255) aTTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCg > 2:4548852/1‑150 (MQ=255) tgctgcCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGcc < 2:1363477/150‑1 (MQ=255) ctgcCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATAATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCcag < 1:2817692/150‑1 (MQ=255) ttCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGAt < 2:4078699/150‑1 (MQ=255) cGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATAcc < 1:2584667/150‑1 (MQ=255) aaCGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTc > 1:2327673/1‑150 (MQ=255) gggCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATa > 2:2427982/1‑150 (MQ=255) gggCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATa > 1:842926/1‑150 (MQ=255) gggCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATa > 2:4935706/1‑150 (MQ=255) ggCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATaa < 1:3464346/150‑1 (MQ=255) gCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAAt < 1:4427298/150‑1 (MQ=255) cTCATCGCAAAGTTACAGATCGTCACGGGCTGGTTGGCGATCGGGTGCATCTTGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATc < 1:4036355/150‑1 (MQ=255) tCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACATCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATcc > 1:2145880/1‑150 (MQ=255) tCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATcc > 1:4586932/1‑150 (MQ=255) cATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATccc < 1:1298043/150‑1 (MQ=255) cATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATccc < 1:4996584/150‑1 (MQ=255) cGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGa > 2:5259845/1‑150 (MQ=255) gCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGac < 1:5144442/150‑1 (MQ=255) aaaCTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGacac > 1:3596190/1‑150 (MQ=255) ttAAAGATCGTCACCGGCTGGTTGGCTATCGGATGAATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGAc < 1:4941384/150‑1 (MQ=255) ttAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGAc < 2:2028656/150‑1 (MQ=255) ttAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGAc < 1:3504061/150‑1 (MQ=255) ttAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGAc < 1:3814056/150‑1 (MQ=255) aaaGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGc > 1:3010632/1‑150 (MQ=255) aGATCGACACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCtt < 2:326263/150‑1 (MQ=255) aTCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTc < 2:4448678/150‑1 (MQ=255) cGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAg < 2:3105396/150‑1 (MQ=255) cGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAg < 2:2097246/150‑1 (MQ=255) cGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAg < 1:3091284/150‑1 (MQ=255) aCCGGCAGGTTGGCGATCGGCTGCATAATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTa > 2:888387/1‑150 (MQ=255) ccGGCTGGTTGGAGATCGGCTTCATCATGTCCGTGCTCCAGAACGGGTTGGAGAGCGCGTTAAACCGCAGCGGCGCGGTTTCACCATCATTACGGGCAATCGCCAGCAGGATACCGGTCATACTCCCGTACACCGACGCTTTCAGCGTaa < 1:200511/150‑1 (MQ=255) ccGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTaa > 2:1823362/1‑150 (MQ=255) cGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAAt < 2:795921/150‑1 (MQ=255) cGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGATTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAAt > 2:1601680/1‑150 (MQ=255) ggCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATc > 2:3774567/1‑150 (MQ=255) ggCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATc < 2:82940/150‑1 (MQ=255) ggCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATc > 1:93200/1‑150 (MQ=255) aGGTTGGCGATCGGCTGCATAATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCa > 2:1309087/1‑150 (MQ=255) ttGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCagag > 2:3696564/1‑150 (MQ=255) gCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGatc < 2:1253903/150‑1 (MQ=255) cGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGatca > 2:3835032/1‑150 (MQ=255) cGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGatca < 1:2159637/150‑1 (MQ=255) gATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGatcat > 2:4288694/1‑150 (MQ=255) gATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGatcat < 2:1501768/150‑1 (MQ=255) gATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGatcat < 1:3923722/150‑1 (MQ=255) gCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTcc < 1:1070964/150‑1 (MQ=255) gCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTcc < 2:1045422/150‑1 (MQ=255) cTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTCCa > 1:3648866/1‑150 (MQ=255) cTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAACAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTCCa < 1:1251981/150‑1 (MQ=255) gCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTCCACt < 2:1146946/150‑1 (MQ=255) atcatGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTCCACTTc > 1:3183028/1‑150 (MQ=255) | TTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCGCAAACGGGCTCATCGCAAACTTAAAGATCGTCACCGGCAGGTTGGCGATCGGCTGCATCATGTCCGTGCTCCAGAACTGGTTGGAGAGCGCGGTAAACAGCAGCGGCGCGGTTTCACCAGCAATACGGGCAATCGCCAGCAGGATACCGGTCATAATCCCGGACACCGACGCTTTCAGCGTAATCGCAGAGATCATCTTCCACTTCGG > CP009273/3901925‑3902223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |