| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,928,761 | G→T | 22.0% | P38P (CCG→CCT) | rbsC → | D‑ribose transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,928,761 | 0 | G | T | 22.0% | 881.0 / 177.8 | 354 | P38P (CCG→CCT) | rbsC | D‑ribose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (136/140); new base T (38/40); total (174/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.97e-01 | |||||||||||
Only 100 of 356 total aligned reads displayed.
TGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGC > CP009273/3928612‑3928910 | tgGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCg < 2:3738736/150‑1 (MQ=255) gggCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGa > 1:1428480/1‑150 (MQ=255) gCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAAc > 2:4225818/1‑150 (MQ=255) cAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGTTGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACt < 2:5109268/150‑1 (MQ=255) cAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACt > 1:3212182/1‑150 (MQ=255) aaGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACtt > 1:3954065/1‑150 (MQ=255) gCTTAATCGCGTGACTCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACtttt < 2:1627530/150‑1 (MQ=255) gCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACtttt > 2:261101/1‑150 (MQ=255) cTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACttttt < 2:562722/150‑1 (MQ=255) tAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCa < 2:3844849/150‑1 (MQ=255) aaTCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCAc < 1:2395021/150‑1 (MQ=255) aTCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCAcc > 1:3807221/1‑150 (MQ=255) tCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCa < 1:2789054/150‑1 (MQ=255) tCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCa < 2:4570401/150‑1 (MQ=255) cgcgTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCAt < 2:655802/150‑1 (MQ=255) gcgTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATc < 2:4015091/150‑1 (MQ=255) gcgTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATc < 2:412304/150‑1 (MQ=255) gcgTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATc < 2:2461462/150‑1 (MQ=255) cgTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCa > 1:390577/1‑150 (MQ=255) gTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCaa > 1:1283732/1‑150 (MQ=255) gAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATa > 2:959393/1‑150 (MQ=255) aaTCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATaa > 1:2201596/1‑150 (MQ=255) aTCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAAc < 2:2261504/150‑1 (MQ=255) tCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACt < 2:3425630/150‑1 (MQ=255) ggAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTAt < 1:4320771/150‑1 (MQ=255) ggAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTAt < 1:3658178/150‑1 (MQ=255) gAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTAtt < 2:2735776/150‑1 (MQ=255) gAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTAtt < 1:1058946/150‑1 (MQ=255) gTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCa < 2:1106922/150‑1 (MQ=255) aaaataTGACAACCCAGACTGTCTCTGGTCGACGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAata < 2:773385/150‑1 (MQ=255) aaaTGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATtc < 1:895395/150‑1 (MQ=255) aTGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATtctc > 2:1965095/1‑150 (MQ=255) aaCCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGTTTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCa < 1:4892878/150‑1 (MQ=255) tcccAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCaa < 2:2374755/149‑1 (MQ=255) aCTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCa < 2:4684007/150‑1 (MQ=255) ctGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACg > 1:2694204/1‑150 (MQ=255) gTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCCGCAAACCTCAGTGAACGCCa > 1:2799353/1‑150 (MQ=255) gCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTa < 1:3565997/150‑1 (MQ=255) gCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTa < 1:2540155/150‑1 (MQ=255) cGTTATTTCACGAATGCGTGGCTGATGGATCAGAAATCGCTTATCGCTCTGCTGGTGCTGATAGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATg < 1:4665866/150‑1 (MQ=255) cGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATg > 2:1924674/1‑150 (MQ=255) cGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATg < 1:3738350/150‑1 (MQ=255) gTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATgg < 1:438194/150‑1 (MQ=255) gTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATgg > 1:1851573/1‑150 (MQ=255) gTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATgg > 1:3932731/1‑150 (MQ=255) aTTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCgg > 2:295491/1‑150 (MQ=255) aTTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCgg > 2:222980/1‑150 (MQ=255) aCGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCggg < 1:5213267/150‑1 (MQ=255) aGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGAc > 2:2171990/1‑150 (MQ=255) gCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACg < 1:1224594/150‑1 (MQ=255) gCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACg < 2:1710696/150‑1 (MQ=255) gCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACg < 2:1398653/150‑1 (MQ=255) gCGTGGCTGATGGAGCAGAAATCGCTTATCGCGCGGCGGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCCTCAATAACTGATTCACGAGTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACg < 2:2774143/150‑1 (MQ=255) ggCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTgg > 2:2303794/1‑150 (MQ=255) aTGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATc > 1:4598184/1‑150 (MQ=255) tGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATcc > 2:1999921/1‑150 (MQ=255) ggAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTCTTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCt < 2:2656387/150‑1 (MQ=255) ggAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCt > 1:3385441/1‑150 (MQ=255) ggAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCt < 2:4338455/150‑1 (MQ=255) gCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGAc < 1:980486/150‑1 (MQ=255) aaaTCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCg > 2:1208446/1‑150 (MQ=255) aaTCGCTTATCGCTCTGCTGTTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCAATTATGGCGGTCGGGATGACGATGGTGATACTGACGTCgt > 2:881912/1‑149 (MQ=255) aaTCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCgg < 2:3217209/150‑1 (MQ=255) aTCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCggg > 2:2088133/1‑150 (MQ=255) tCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGc > 2:3005631/1‑150 (MQ=255) tCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGc < 2:4463505/150‑1 (MQ=255) tATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGa > 1:1498821/1‑150 (MQ=255) aTCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGAc > 2:2839362/1‑150 (MQ=255) cGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACtt > 1:4511503/1‑150 (MQ=255) gCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTa < 1:1973345/150‑1 (MQ=255) gCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTa > 1:2306043/1‑150 (MQ=255) tctGCTTGTGCTTATCTATTTTGTCTCGACGTTAAGCCCTAAATTTTTCAACATCAATAACTTATTCAATCTTCTCCAGCTAACCTATGTTTTAGACATTATGGAGGTCGTGATTACGATGGTGATCCTGACTTCTGGCATCGACTTATc < 1:1022718/150‑1 (MQ=255) tctGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATc < 1:3502652/150‑1 (MQ=255) gTGCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGt < 1:1659694/150‑1 (MQ=255) gTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGt < 1:3004466/150‑1 (MQ=255) gTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGt < 1:4225818/150‑1 (MQ=255) gCTGATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTtc < 1:3089487/150‑1 (MQ=255) cTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTtct > 2:4956774/1‑150 (MQ=255) gATCGCGATTGTCTCGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTctct > 1:66307/1‑150 (MQ=255) gATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTctct < 1:5328376/150‑1 (MQ=255) cgcgATTGTCTCGACGTTAAGCCCGAACATTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGtt < 2:3508483/150‑1 (MQ=255) gATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgc > 1:2579606/1‑150 (MQ=255) gATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgc < 1:1783827/150‑1 (MQ=255) gATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgc > 1:408534/1‑150 (MQ=255) gTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg > 1:1815483/1‑150 (MQ=255) gTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg > 2:4795581/1‑150 (MQ=255) gTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg > 2:5194551/1‑150 (MQ=255) ctcGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGAc > 2:5022653/1‑150 (MQ=255) tcGACGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGAcc > 1:4352493/1‑150 (MQ=255) tcGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGAcc < 2:3637801/150‑1 (MQ=255) cGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCCGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCg < 1:4172207/150‑1 (MQ=255) cGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCg > 2:3242680/1‑150 (MQ=255) cGTTAAGCCCTAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGgcg > 1:497452/1‑150 (MQ=255) cGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGgcg > 2:1525103/1‑150 (MQ=255) gTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGgcgc > 1:1590858/1‑150 (MQ=255) aaGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGt > 2:1182468/1‑150 (MQ=255) aGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGtt < 1:3225987/150‑1 (MQ=255) aGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGtt > 1:4765140/1‑150 (MQ=255) cccGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTtgc < 1:620025/150‑1 (MQ=255) cGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTtgctg > 2:3866998/1‑150 (MQ=255) | TGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGC > CP009273/3928612‑3928910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |