| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,993,566 | A→G | 15.0% | intergenic (+61/+86) | uvrD → / ← yigE | DNA‑dependent ATPase I and helicase II/DUF2233 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,993,566 | 0 | A | G | 15.0% | 979.5 / 153.3 | 387 | intergenic (+61/+86) | uvrD/yigE | DNA‑dependent ATPase I and helicase II/DUF2233 family protein |
| Reads supporting (aligned to +/- strand): ref base A (175/151); new base G (29/29); total (204/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 397 total aligned reads displayed.
GCGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGCCCC > CP009273/3993417‑3993714 | cGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAAt < 1:118045/150‑1 (MQ=255) cGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAAt > 1:3382206/1‑150 (MQ=255) cGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAAt > 1:4343408/1‑150 (MQ=255) cGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAAt < 1:5214564/150‑1 (MQ=255) ggTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAAtt < 1:4058361/150‑1 (MQ=255) ggTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAAtt > 1:2466896/1‑150 (MQ=255) gTGAGCATAGCCGTTAGCAGGTGGCATTACAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTAGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTg > 2:3785260/1‑150 (MQ=255) tAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTc < 2:185436/150‑1 (MQ=255) cGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGt < 1:871052/150‑1 (MQ=255) gTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTa < 1:846174/150‑1 (MQ=255) gTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTa > 2:523/1‑150 (MQ=255) ttGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAgg > 2:2675621/1‑150 (MQ=255) gCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGcc < 2:1166925/150‑1 (MQ=255) aGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCgg > 1:497938/1‑150 (MQ=255) gCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAgg < 2:2724983/150‑1 (MQ=255) ttCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGt > 1:4242373/1‑150 (MQ=255) gggCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTAc > 2:580213/1‑150 (MQ=255) gggCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTAc > 2:5102991/1‑150 (MQ=255) ggCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTAcg < 1:1370848/150‑1 (MQ=255) ccAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AATAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTAcgcc < 2:4771940/150‑1 (MQ=255) aGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTAcgccgc > 1:1490628/1‑150 (MQ=255) aGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTAcgccgc < 1:503532/150‑1 (MQ=255) gggTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCa > 1:773401/1‑150 (MQ=255) ggTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCAt > 2:4340219/1‑150 (MQ=255) ggTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCAt > 1:1063606/1‑150 (MQ=255) aTTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCg > 2:2127250/1‑150 (MQ=255) aTTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCg < 1:1798022/150‑1 (MQ=255) ttAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCgg > 2:2765840/1‑150 (MQ=255) ggCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGGTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCAGTCAGATTCAATAAATTGCACCGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTg < 2:2920257/150‑1 (MQ=255) gCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgc > 1:3933361/1‑150 (MQ=255) gCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgc > 2:3324712/1‑150 (MQ=255) ggtggCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGcc < 1:3912859/150‑1 (MQ=255) tggCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCAt < 2:5058642/150‑1 (MQ=255) cggcATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCTAAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCt < 2:4560972/150‑1 (MQ=255) cggcATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCtt < 2:3109107/150‑1 (MQ=255) ggcATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTc > 1:2633780/1‑150 (MQ=255) ggcATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCAATCAGATTAAATAAATTGCAACGTCATGTAGGCCGGATAGTGCGTTTACGCCGCATACGGCATAAGCGCCAACtta > 1:2707870/1‑149 (MQ=255) gcATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCa < 1:2017746/150‑1 (MQ=255) aTACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGt > 2:84661/1‑150 (MQ=255) cGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATc < 1:284866/150‑1 (MQ=255) gCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCt < 1:2127250/150‑1 (MQ=255) cccGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTg > 2:2525930/1‑150 (MQ=255) cccGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTg < 1:5261342/150‑1 (MQ=255) tGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACaa > 1:3206199/1‑150 (MQ=255) ggAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACaaa < 1:2278726/150‑1 (MQ=255) cGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTAt < 1:2389248/150‑1 (MQ=255) cGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTAt < 2:2286182/150‑1 (MQ=255) tgtAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGt > 1:367397/1‑150 (MQ=255) gtAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtt > 1:1829364/1‑150 (MQ=255) tAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttt < 1:533936/150‑1 (MQ=255) aaCGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtttt > 2:3993484/1‑150 (MQ=255) cGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttttta < 2:723951/150‑3 (MQ=255) gTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAAc > 1:1269281/1‑150 (MQ=255) tGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCt < 2:1586993/150‑1 (MQ=255) tGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCt < 2:165951/150‑1 (MQ=255) gCCGGATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCtt < 1:5276038/150‑1 (MQ=255) gCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCtt < 2:1439706/150‑1 (MQ=255) ccGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCttt > 2:4357681/1‑150 (MQ=255) ccGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGAGTCACTAACTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCttt < 2:4831529/150‑1 (MQ=255) ggATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTcc < 1:55256/150‑1 (MQ=255) ggATGCGGTACTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTcc < 1:3802995/150‑1 (MQ=255) gATGCGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCg < 1:2209991/150‑1 (MQ=255) aTGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGc > 2:4249617/1‑150 (MQ=255) cGGTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCg < 2:3873233/150‑1 (MQ=255) gTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGAc > 1:5090699/1‑150 (MQ=255) gTGCTGCGCACCTTGTTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGAc > 2:4690612/1‑150 (MQ=255) tgcGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGaa < 2:450987/150‑1 (MQ=255) gcACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATc > 1:4397372/1‑150 (MQ=255) gcACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATc > 1:3984617/1‑150 (MQ=255) ttATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGt > 1:1901598/1‑150 (MQ=255) tATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTg < 2:4881008/150‑1 (MQ=255) gtttGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGa > 2:367504/2‑150 (MQ=255) tttGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc < 2:629573/150‑1 (MQ=255) tttGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc < 1:3117140/150‑1 (MQ=255) ttGGCCT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACa > 1:5206861/1‑150 (MQ=255) ttGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACACAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACa < 2:3485537/150‑1 (MQ=255) ggCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCGGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACaaa > 2:2375985/1‑150 (MQ=255) ccT‑AAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTCTCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGTCTAAAg < 1:580230/150‑1 (MQ=255) ccT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAg > 1:3297987/1‑150 (MQ=255) ccT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAg > 1:4159089/1‑150 (MQ=255) cT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAgg < 2:535651/150‑1 (MQ=255) aaaaaaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGAt < 2:9518/150‑1 (MQ=255) aaaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAg > 1:3030903/1‑150 (MQ=255) aaaaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAg < 2:3024053/150‑1 (MQ=255) aaTCATTCAGATTCACTAAATTGCACCGTCATGGAGGCCGGATTGGGCGTTTACGCCGCCTCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCg < 1:2526710/150‑1 (MQ=255) aaTCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCg > 2:4958963/1‑150 (MQ=255) aTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGt > 1:1574463/1‑150 (MQ=255) aTCATTCAGATTCAATAAATTGCAAAGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGTTAGCgg > 2:3840977/1‑149 (MQ=255) tCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGtt > 2:1094962/1‑150 (MQ=255) cATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTg < 1:4756550/150‑1 (MQ=255) tCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCa < 1:4658516/150‑1 (MQ=255) cAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCAc > 1:3445893/1‑150 (MQ=255) aGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACg > 2:4980124/1‑150 (MQ=255) aTTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACggg > 1:4582317/1‑150 (MQ=255) aTTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACggg > 1:1036212/1‑150 (MQ=255) ttCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGa < 2:1282497/150‑1 (MQ=255) cAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAtt < 1:1731078/150‑1 (MQ=255) cAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAtt < 2:3213665/150‑1 (MQ=255) aTAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGc > 1:4865831/1‑150 (MQ=255) aaaTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGccc > 2:4373897/1‑150 (MQ=255) | GCGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCT‑AAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGCCCC > CP009273/3993417‑3993714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |