| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,040,044 | A→C | 33.2% | intergenic (‑82/‑282) | yihG ← / → polA | inner membrane protein, inner membrane acyltransferase/fused DNA polymerase I 5'‑>3' polymerase/3'‑>5' exonuclease/5'‑>3' exonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,040,044 | 0 | A | C | 33.2% | 308.4 / inf | 389 | intergenic (‑82/‑282) | yihG/polA | inner membrane protein, inner membrane acyltransferase/fused DNA polymerase I 5'‑>3' polymerase/3'‑>5' exonuclease/5'‑>3' exonuclease |
| Reads supporting (aligned to +/- strand): ref base A (120/139); new base C (59/70); total (179/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01 | |||||||||||
Only 100 of 407 total aligned reads displayed.
ATACTCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGCACAAAG > CP009273/4039895‑4040193 | aTACTCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATCATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAaata > 2:2466597/1‑150 (MQ=255) cTCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAAtt > 1:3225932/1‑150 (MQ=255) cTCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAAtt > 2:451239/1‑150 (MQ=255) aGCAAAAGGGTTATCGCAGCGAGTATTCTCGTAATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCATAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAAtcattcat < 1:1573938/150‑1 (MQ=255) aaaaGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCAtatc > 2:830506/1‑150 (MQ=255) aacgggTTATCGCAGCGAGTATTATCGTCATAATTAATTTTTTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCACATAACGGATGATCCTTAAGGAGAAAAATAATTCAtatct < 2:4313652/147‑1 (MQ=255) aaaGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCAtatct > 2:5278865/1‑150 (MQ=255) aGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCAtatctat > 1:191578/1‑150 (MQ=255) gggTTATCGCATCTATTATTCTCTTCATAATTAATTTATTCAAAAGGTTAGCCATAGACAGTGCGAAAAAGACGCGCAAGGCGAAGATTTTAGCATAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCAtatctatc < 1:4957325/150‑1 (MQ=255) gggTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCAtatctatc < 1:4273555/150‑1 (MQ=255) gtttATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATcc < 2:4093137/148‑1 (MQ=255) ggTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATcc < 1:5310079/150‑1 (MQ=255) gTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCca < 2:3550525/150‑1 (MQ=255) cGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTa > 2:1432492/1‑150 (MQ=255) gAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGaaaaa < 1:3436293/150‑1 (MQ=255) gAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGaaaaa > 1:3315575/1‑150 (MQ=255) gTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAAt < 2:3029421/150‑1 (MQ=255) ttCTCGTAATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGATAAAGAAGCGAAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATccc < 1:1522731/150‑1 (MQ=255) cGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTa > 1:2339465/1‑150 (MQ=255) cGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTa > 2:2230853/1‑150 (MQ=255) gTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTACAGAAGCGCAAGGCGAAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTAATATCTATCCACATTAGAAAAAATCCCATTAt < 2:4860623/150‑1 (MQ=255) gTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTAt < 2:4042264/150‑1 (MQ=255) gTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTAt > 2:3610657/1‑150 (MQ=255) gTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTAt < 2:1897640/150‑1 (MQ=255) cATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTAtct > 1:4847870/1‑150 (MQ=255) cATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCACATTAtct > 2:2697584/1‑150 (MQ=255) aaTGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCaa < 2:3735431/150‑1 (MQ=255) aaTGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCaa > 2:4966540/1‑150 (MQ=255) aTGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCCCATTAGAAAAAATCCCATTATCTCAat > 2:3951814/1‑150 (MQ=255) tGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAatt < 2:437561/150‑1 (MQ=255) tGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAatt > 2:1945694/1‑150 (MQ=255) tATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCCAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGAGGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAgg > 1:2306569/1‑150 (MQ=255) tATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAgg > 2:2796673/1‑150 (MQ=255) aTTCAAATGGTTAGCCATAGACATTGCGCTAAAGAAGCGCAAGGCGCTGATTTTAGCTGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATACACATTAGAAAAAATCCCATTATCTCAATTATTAggg < 1:4371641/150‑1 (MQ=255) aTTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAggg > 1:3517099/1‑150 (MQ=255) aTTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAggg < 1:1712773/150‑1 (MQ=255) aTTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAggg < 2:3959868/150‑1 (MQ=255) aTTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAggg > 1:4084590/1‑150 (MQ=255) aTTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAggg > 2:320663/1‑150 (MQ=255) cAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatg > 1:461886/1‑150 (MQ=255) aaaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgg < 2:2072328/150‑1 (MQ=255) aaaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgg > 2:2424174/1‑150 (MQ=255) aaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgga > 1:243445/1‑150 (MQ=255) aaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgga < 2:1228694/150‑1 (MQ=255) aaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatggat > 2:2353278/1‑150 (MQ=255) aGGTTAGCCATAGACAGTGCGATAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGatt < 1:721437/150‑1 (MQ=255) tAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAATAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGatttatt < 2:1677976/150‑1 (MQ=255) aGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGatttattt < 1:979773/150‑1 (MQ=255) aTAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTaa > 1:367944/1‑150 (MQ=255) tAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAAc < 2:4166515/150‑1 (MQ=255) tAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAAc > 1:1019439/1‑150 (MQ=255) gttcgcTAAAGAATATAAATGCGCATATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATg < 1:255547/147‑1 (MQ=255) gTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATg < 1:2842412/150‑1 (MQ=255) gTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCCTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATg < 1:4482384/150‑1 (MQ=255) agaagCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACaaa > 1:5115807/1‑150 (MQ=255) agaagCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACaaa > 1:3461629/1‑150 (MQ=255) agaagCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACaaa > 2:1299294/1‑150 (MQ=255) gaagCGCACGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAg < 2:2328985/150‑1 (MQ=255) gaagCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAg < 1:2613548/150‑1 (MQ=255) agCGCAAGGCGCTGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGAc < 2:4726069/150‑1 (MQ=255) aaGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAca > 1:3075986/1‑150 (MQ=255) aGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcat > 1:4385010/1‑150 (MQ=255) ggCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcatc < 2:4641966/150‑1 (MQ=255) cgcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcatcat < 2:2531875/150‑1 (MQ=255) gcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATg < 2:3906145/150‑1 (MQ=255) cAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGc < 1:830506/150‑1 (MQ=255) aGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCt < 1:1816048/150‑1 (MQ=255) ttttAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTa < 1:4167523/150‑1 (MQ=255) gCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAg < 2:514242/150‑1 (MQ=255) cAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGc > 2:1169643/1‑150 (MQ=255) aGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCa > 2:657750/1‑150 (MQ=255) gAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCAt > 2:157040/1‑150 (MQ=255) gAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCAt < 2:603175/150‑1 (MQ=255) gAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCAt < 2:26393/150‑1 (MQ=255) aaaaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATg > 1:5033564/1‑150 (MQ=255) caCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGat < 1:4060856/149‑1 (MQ=255) aaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGat < 1:2072906/150‑1 (MQ=255) aaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGat > 1:1090655/1‑150 (MQ=255) aaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGat < 1:2230853/150‑1 (MQ=255) aCGACCCAAATAAGTGATGATCCTTTAGGATAAATATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATTGATTTATTTTTTACTGCATGAAAAACAAAGCCAAACATCATGCTGTAAAAAGCATGata < 1:1247429/150‑1 (MQ=255) gACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGataat > 1:1651183/1‑150 (MQ=255) cAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAAt < 1:5252623/150‑1 (MQ=255) aaTAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTa < 1:2466597/150‑1 (MQ=255) aCGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAg > 2:3523387/1‑150 (MQ=255) ggATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCg > 1:2979743/1‑150 (MQ=255) tgatCCTTAAGTAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATg < 2:1385337/150‑1 (MQ=255) tgatCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATg > 2:1464309/1‑150 (MQ=255) gatCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGt < 1:2697905/150‑1 (MQ=255) gatCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGt > 1:3821682/1‑150 (MQ=255) gatCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGt > 1:4132180/1‑150 (MQ=255) ccTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATAAAAAGCGATGTaaa > 1:4732396/1‑150 (MQ=255) cTTAAGGAGAAAAATAATTCATATCTATACACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAaat < 2:3287151/150‑1 (MQ=255) ggAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAAttt > 1:4044209/1‑150 (MQ=255) ggAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAAttt > 2:2699380/1‑150 (MQ=255) agaAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTAt < 2:3359141/150‑1 (MQ=255) aatcatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGcaca < 2:3809128/150‑1 (MQ=255) aataatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGcaca < 2:1785781/150‑1 (MQ=255) aataatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGcaca > 2:4815753/1‑150 (MQ=255) aataatTCATATATATCAACATTATAAAAAATCAAATTATCTAAATTATTAGGTATGGATTTTTTTTTAACTGCATCAAAAACAAAGACAAACATCATGCTTTAAAAAGCATTATAATAAATTAACAGCTTTTTAAATAATTTTTGcaca < 2:455626/150‑1 (MQ=255) aatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGAGATTTAAAAAATTTATGaaaaaat > 1:2946464/1‑149 (MQ=255) | ATACTCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGCACAAAG > CP009273/4039895‑4040193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |