| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,108,175 | C→T | 100% | intergenic (‑157/‑268) | glpF ← / → zapB | glycerol facilitator/FtsZ stabilizer; septal ring assembly factor, stimulates cell division |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,108,175 | 0 | C | T | 99.6% | 1189.6 / ‑4.6 | 360 | intergenic (‑157/‑268) | glpF/zapB | glycerol facilitator/FtsZ stabilizer; septal ring assembly factor, stimulates cell division |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base T (190/168); total (190/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 363 total aligned reads displayed.
GAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAC > CP009273/4108030‑4108323 | gAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAACACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCAtt < 2:4119184/150‑1 (MQ=255)gAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCAtt > 2:279017/1‑150 (MQ=255) gTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTc < 1:4845385/150‑1 (MQ=255) ttAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTcc < 1:2744397/150‑1 (MQ=255) aaTGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCAt > 2:4662977/1‑150 (MQ=255) gtttgttGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTg > 2:1206195/1‑150 (MQ=255) tgtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTa < 2:1139578/150‑1 (MQ=255) tgtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTa > 1:2466186/1‑150 (MQ=255) gtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTAc > 1:1003757/1‑150 (MQ=255) gtATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTAc < 2:1247761/150‑1 (MQ=255) tATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGGAATCGCGTCATTTATTCCATCTGATTGTACa > 2:2530575/1‑150 (MQ=255) tGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACatg < 2:5104609/150‑1 (MQ=255) gAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCa < 1:1206195/150‑1 (MQ=255) aaaGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCAt > 1:1434819/1‑150 (MQ=255) tCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCAtgttt < 1:107059/150‑1 (MQ=255) cACGGACCTCCACGATGCTTGTATGAATGCTGTAAACTTATCGTTAACGAGAAAAAACGAGAAATATCGAACTTAAAATTTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGTTTGTACATGATGCAtgtttg < 2:3489779/150‑1 (MQ=255) aCGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCAtgtttgt > 2:3060812/1‑150 (MQ=255) gACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAg < 1:1847024/150‑1 (MQ=255) ccTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGAt < 1:521134/150‑1 (MQ=255) cTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATc < 2:757036/150‑1 (MQ=255) cTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATc > 1:3340533/1‑150 (MQ=255) cTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATc < 1:3844839/150‑1 (MQ=255) cTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCAGGTTTGTTAGATc > 2:5135931/1‑150 (MQ=255) tCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCa < 1:2860527/150‑1 (MQ=255) aCGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTc > 1:931767/1‑150 (MQ=255) cGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTcg > 2:2912085/1‑150 (MQ=255) cGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTcg > 1:5153591/1‑150 (MQ=255) cGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTcg > 2:1578829/1‑150 (MQ=255) gATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTcgc < 2:2747639/150‑1 (MQ=255) tGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCgcgc > 1:341716/1‑150 (MQ=255) gCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGca < 2:219260/150‑1 (MQ=255) gCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGca < 2:5322312/150‑1 (MQ=255) ttGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGcaac < 2:3457310/150‑1 (MQ=255) gTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGcaacaa < 2:2454867/150‑1 (MQ=255) aGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCTACaaag > 1:2693425/1‑149 (MQ=255) cATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATtta < 2:3581706/150‑1 (MQ=255) cATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATtta > 2:3125316/1‑150 (MQ=255) gCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCACCAAATttatta > 2:388843/1‑150 (MQ=255) gCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATttatta > 1:4380857/1‑150 (MQ=255) cTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTaa > 1:3088122/1‑150 (MQ=255) cTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTaa > 2:448189/1‑150 (MQ=255) tGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAAc < 2:929311/150‑1 (MQ=255) tGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAAc > 2:83620/1‑150 (MQ=255) gTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACa < 1:1241796/150‑1 (MQ=255) gTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACa < 1:4514620/150‑1 (MQ=255) gTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACa > 1:3591614/1‑150 (MQ=255) tAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACAt > 2:1640055/1‑150 (MQ=255) aCTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACAtttt < 2:3412725/150‑1 (MQ=255) cTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTc < 1:4591396/150‑1 (MQ=255) ttATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCg > 1:1333383/1‑150 (MQ=255) ttATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCg < 2:4306516/150‑1 (MQ=255) aTCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGAt < 2:4872281/150‑1 (MQ=255) aTCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGAt > 2:1293322/1‑150 (MQ=255) aTCGTTAACGAGAAAAAACGAGAGATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTAGTTATATCATTCGCGCAACAAATTTATTAACATTTACGAt > 2:3227315/1‑150 (MQ=255) ttAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGAt < 2:1336056/150‑1 (MQ=255) ttAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGAt < 1:164409/150‑1 (MQ=255) aaCGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGAtgt > 1:5286999/1‑150 (MQ=255) cAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTa > 1:1924376/1‑150 (MQ=255) cAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTa > 1:217655/1‑150 (MQ=255) cAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATGCGCGCAACACATTTATTAACATTTTCGATTGATGTGGATTa > 1:4944769/1‑150 (MQ=255) aaaaaCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTACTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTAt < 1:3264881/150‑1 (MQ=255) aaaaCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATg > 2:5037900/1‑150 (MQ=255) aaaCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGt > 2:2088963/1‑150 (MQ=255) aCGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCa < 1:3018844/150‑1 (MQ=255) gagaAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCAcc > 2:3965669/1‑150 (MQ=255) agaAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCa > 2:4741307/1‑150 (MQ=255) agaAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCa < 1:3491144/150‑1 (MQ=255) aaaTATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAgg < 1:4310487/150‑1 (MQ=255) aaTATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGga > 1:801736/1‑150 (MQ=255) atatCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGgag > 2:511227/1‑150 (MQ=255) tatCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGgaga < 1:4538270/150‑1 (MQ=255) cGAACTTAATATGTGTGTGCCTCGTCATATAATGAGAGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAgg < 1:2420135/150‑1 (MQ=255) gAACGTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCAGCTGATTGTACATGCTGCATGTTTGTTAGATCATTCGCGCAACAACTTTATTAACATTTTCTATTGATGTGGATTATGTCACCAGGAGAAGGa > 1:1496931/1‑150 (MQ=255) aCTTTATATGTGTGTGCCTCGTCATAATATGAGCGTTATGGCTTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGTTCATTCGCGCAACAAATTTATTTACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATg < 2:4383183/150‑1 (MQ=255) aCTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATg > 1:2822239/1‑150 (MQ=255) cTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGa > 1:5062046/1‑150 (MQ=255) aaaaTGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGaaaa < 2:4969681/150‑1 (MQ=255) aaaTGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAg > 1:478967/1‑150 (MQ=255) aaTGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAgt > 1:4750804/1‑150 (MQ=255) aaTGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAgt > 2:4247817/1‑150 (MQ=255) tgtgtgCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTgg < 2:1745433/150‑1 (MQ=255) gCCTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAc < 1:2589104/150‑1 (MQ=255) ccTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAcc > 2:4050936/1‑150 (MQ=255) ccTCGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAcc > 1:4101286/1‑150 (MQ=255) ccTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAcc < 1:1698971/150‑1 (MQ=255) cGTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTa > 1:1537504/1‑150 (MQ=255) gTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTaa > 2:2335825/1‑150 (MQ=255) gTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTaa > 2:2188259/1‑150 (MQ=255) gTCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAAACGTaa > 2:3665975/1‑150 (MQ=255) tCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAAt < 2:1522560/150‑1 (MQ=255) tCATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAAt < 1:3878263/150‑1 (MQ=255) cATAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATc < 1:3467634/150‑1 (MQ=255) aTAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCt > 2:5268792/1‑150 (MQ=255) tAAAATGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATTTTTTTTAGATCATTCGCTCAACAAATTTATAAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTg < 2:3351088/150‑1 (MQ=255) aaTGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCaa > 2:966817/1‑150 (MQ=255) tGAGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAgg < 2:4380715/150‑1 (MQ=255) aGCGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCg > 1:2921688/1‑150 (MQ=255) cGTTATCGCGTCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTg < 1:715024/150‑1 (MQ=255) gcgtCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTgg > 2:1053152/1‑150 (MQ=255) gcgtCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTgg > 2:3726073/1‑150 (MQ=255) | GAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCTTGTAGGCATGCTGTAAACTTATCGTTAACGAGCAAAAACGAGAAATATCGAACTTAAAATGTGTGTGCCTCGTCATAAAATGAGCGTTATCGCGCCATTTATTCCATCTGATTGTACATGATGCATGTTTGTTAGATCATTCGCGCAACAAATTTATTAACATTTTCGATTGATGTGGATTATGTCACCAGGAGAAGGATGAAAAGTGTGGCAAACCGTAATCTGCAAGGCGTGCCGCTGGAC > CP009273/4108030‑4108323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |