| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,124,384 | C→A | 100% | H208N (CAT→AAT) | katG → | catalase‑peroxidase HPI, heme b‑containing |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,124,384 | 0 | C | A | 98.7% | 1012.6 / 2.3 | 318 | H208N (CAT→AAT) | katG | catalase‑peroxidase HPI, heme b‑containing |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base A (161/153); total (163/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 319 total aligned reads displayed.
CCTGGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGAC > CP009273/4124235‑4124530 | ccTGGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGACGACGGCTGGGAACCGGATCTGGATGTTAACGGGGGTGATGACAAAGCCTGGCTGACTCACCGTc > 2:1669118/1‑150 (MQ=255) tGGGCCGACCTGTTTATCCTCTCGGGTAAAGTGGCGCAAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAAt > 2:3656245/1‑150 (MQ=255) gggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATc < 2:1341937/150‑1 (MQ=255) ggCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATcc < 1:4580057/150‑1 (MQ=255) gCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCg > 1:1196708/1‑150 (MQ=255) ccGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCgg > 2:261414/1‑150 (MQ=255) cGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGTCTGACTCACCGTAATCCGGa > 1:5241588/1‑150 (MQ=255) cGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGa > 2:1453551/1‑150 (MQ=255) gACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGaa < 2:3347197/150‑1 (MQ=255) aCCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTACTCCGGAAg > 2:1189664/1‑150 (MQ=255) ccTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAgc < 1:3646331/150‑1 (MQ=255) cTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGCTGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAgcg > 1:2019845/1‑150 (MQ=255) tGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAgcgc < 1:1306639/150‑1 (MQ=255) gTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCt > 1:2079066/1‑150 (MQ=255) gTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCt < 1:2704805/150‑1 (MQ=255) aTCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCTCCGTCATCCGGAAGCGCTGGCg > 2:3029310/1‑150 (MQ=255) tCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGGCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGa > 1:4793301/1‑150 (MQ=255) cTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGaaa > 1:3314904/1‑150 (MQ=255) gggTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCAcc > 2:2403615/1‑150 (MQ=255) ggCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCAGGAAGCGCTGGCGAAAGCACCGCTGGGTGc > 2:4810256/1‑150 (MQ=255) gcgcTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCa < 1:4755092/150‑1 (MQ=255) cTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAAcc < 2:4355206/150‑1 (MQ=255) tAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCg > 1:2601781/1‑150 (MQ=255) aGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCga < 1:4308167/150‑1 (MQ=255) aaaaCTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCgaga > 2:2938134/1‑150 (MQ=255) tCCGGCTTCCGTACCTTCGGGTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGt < 2:255440/150‑1 (MQ=255) cGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCt > 2:4153943/1‑150 (MQ=255) ggCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTg > 1:816591/1‑150 (MQ=255) ggCTTCCGTACCTTCGGTTTTGGTGCCGGACGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTTGCTGACTCACCGTAATCCTGAAGCGCTGTCGAAAGCACCGCTGGGTGCAACCTAGATGGGTATg > 1:741706/1‑150 (MQ=255) tCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGAttt < 1:2337755/150‑1 (MQ=255) ccGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTa > 2:4971530/1‑150 (MQ=255) cGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTAc < 1:4536955/150‑1 (MQ=255) gTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACg > 2:5279580/1‑150 (MQ=255) gTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACg > 1:1858259/1‑150 (MQ=255) ccTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTa > 2:3842539/1‑150 (MQ=255) cTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTaa > 1:41691/1‑150 (MQ=255) cGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAAccc < 1:1079767/150‑1 (MQ=255) ggTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCg > 2:1653864/1‑150 (MQ=255) ttGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAg < 1:4648133/150‑1 (MQ=255) tGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAgg < 2:1434282/150‑1 (MQ=255) gTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAATAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGcc < 1:1345833/150‑1 (MQ=255) tGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGccc > 1:3442105/1‑150 (MQ=255) tGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGccc < 1:4863556/150‑1 (MQ=255) ggTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGAt > 1:3950492/1‑150 (MQ=255) gTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATc > 2:1807112/1‑150 (MQ=255) gTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATcaca < 1:1644944/150‑1 (MQ=255) gTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATcaca > 1:2415207/1‑150 (MQ=255) gTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATcaca < 1:2740381/150‑1 (MQ=255) gAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAgc > 2:4227870/1‑150 (MQ=255) gAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAgc < 1:80339/150‑1 (MQ=255) gACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAgcggc < 2:3709911/150‑1 (MQ=255) gTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGaa > 1:607293/1‑150 (MQ=255) tCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAAc < 1:3837752/150‑1 (MQ=255) cTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAAcc < 2:2191371/150‑1 (MQ=255) cTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAAcc > 1:4233607/1‑150 (MQ=255) ggAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCt < 1:3174797/150‑1 (MQ=255) aaCCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCttt < 1:44783/150‑1 (MQ=255) aaCCGGATCTGGATGTTAACTGGGGTGAAGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCttt < 2:3517775/150‑1 (MQ=255) aTCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCgg < 1:5119134/150‑1 (MQ=255) cTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgca < 1:1017528/150‑1 (MQ=255) tGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgcag > 1:867349/1‑150 (MQ=255) ggATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgcagc > 1:2976348/1‑150 (MQ=255) ggATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGgcagc > 2:1772555/1‑150 (MQ=255) tGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCagcagc > 1:2565839/1‑150 (MQ=255) tGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTATGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCagcagc < 2:1542295/150‑1 (MQ=255) tGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAAACGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCagcagc > 2:3946910/1‑150 (MQ=255) gTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCt < 2:2165545/150‑1 (MQ=255) ttAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTa < 1:1490749/150‑1 (MQ=255) ttAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTa < 1:2947407/150‑1 (MQ=255) tAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTAt > 2:768464/1‑150 (MQ=255) aCTGGGGTGCTGAAAAAGCCTGGCTGACTCACCGGAATCCGGTAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTTCGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATcc < 1:2701274/150‑1 (MQ=255) aCTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATcc < 2:4614014/150‑1 (MQ=255) cTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcg < 2:735633/150‑1 (MQ=255) cTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcg > 1:3717009/1‑150 (MQ=255) cTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcg < 1:996720/150‑1 (MQ=255) tGGGGTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcgc > 1:771414/1‑150 (MQ=255) ggggTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcgcg > 2:3186530/1‑150 (MQ=255) ggggTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGACTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcgcg < 1:1510284/150‑1 (MQ=255) ggTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCcgcgcg < 2:3297860/150‑1 (MQ=255) gTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGa > 1:2505659/1‑150 (MQ=255) gTGATGAAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGa > 1:3792480/1‑150 (MQ=255) atgaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCt < 2:1789413/150‑1 (MQ=255) atgaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCt > 1:655674/1‑150 (MQ=255) tgaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCtt > 2:1991978/1‑150 (MQ=255) gaAAAAGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTc < 2:2771019/150‑1 (MQ=255) aaaaGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCgg > 1:2639859/1‑150 (MQ=255) aGCCTGGCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCaa > 1:3740544/1‑150 (MQ=255) gCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATggg < 2:3094657/150‑1 (MQ=255) gCTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATggg > 1:1430347/1‑150 (MQ=255) cTGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGc < 2:2079066/150‑1 (MQ=255) tGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCa > 1:3051114/1‑150 (MQ=255) tGACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCa > 2:2507273/1‑150 (MQ=255) gACTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCAt < 1:1453551/150‑1 (MQ=255) aCTCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATg < 1:303102/150‑1 (MQ=255) tCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGaa > 1:2971801/1‑150 (MQ=255) tCACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGaa < 2:816591/150‑1 (MQ=255) cACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAac < 1:497645/150‑1 (MQ=255) cACCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAac < 1:5171753/150‑1 (MQ=255) aCCGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAacg > 2:3204256/1‑150 (MQ=255) cGTAATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAacgac < 1:3490780/150‑1 (MQ=255) | CCTGGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGAC > CP009273/4124235‑4124530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |