| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,185,155 | G→T | 25.5% | I291I (ATC→ATA) | thiC ← | phosphomethylpyrimidine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,185,155 | 0 | G | T | 25.5% | 561.4 / 152.5 | 270 | I291I (ATC→ATA) | thiC | phosphomethylpyrimidine synthase |
| Reads supporting (aligned to +/- strand): ref base G (120/80); new base T (35/34); total (155/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.83e-01 | |||||||||||
Only 100 of 271 total aligned reads displayed.
ACATAGCGCAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAAGAGGTGACCGCCGA > CP009273/4185006‑4185301 | aGCGCAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCg < 1:1253284/150‑1 (MQ=255) aGCGCAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCg < 1:4510623/150‑1 (MQ=255) gcgcAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCgg > 1:3093967/1‑150 (MQ=255) cgcAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGc < 2:5110068/150‑1 (MQ=255) cgcAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGc > 2:3710783/1‑150 (MQ=255) cgcAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGAGCGGCACTGTACCGATCGGc > 2:3992639/1‑150 (MQ=255) gcagcaGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCa < 2:5311706/150‑1 (MQ=255) gcagcaGTACGCCCGCATGGAAAGAGAAGTAATCCACACCTTGCACGGCCTGTTCCAGCTGAGTGTCGCGGAACGCTTCCAAGGTAAGATCTTCGGCGAACCCGTTAACCATATCCAGCGCCAGGTAGATCGGCACTGAACCTATCGGCa > 2:2631364/1‑150 (MQ=255) agcagTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCAcc > 1:4759540/1‑150 (MQ=255) cagTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCgg > 2:1226776/1‑150 (MQ=255) agTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCggg > 2:586940/1‑150 (MQ=255) tACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCt < 1:2702419/150‑1 (MQ=255) gCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGtt < 2:1220736/150‑1 (MQ=255) cccGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTa < 1:3599007/150‑1 (MQ=255) ccGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTAc > 2:4185795/1‑150 (MQ=255) cGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACg > 1:3258330/1‑150 (MQ=255) tGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCaaa < 1:1673656/150‑1 (MQ=255) gATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAAt > 2:69247/1‑150 (MQ=255) aTAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATc > 2:1719205/1‑150 (MQ=255) tAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATcc > 1:2749390/1‑150 (MQ=255) tAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATcc < 2:3522201/150‑1 (MQ=255) aGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCa < 2:2169130/150‑1 (MQ=255) gTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATATTCGGAGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCAc > 2:1665977/1‑150 (MQ=255) tGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACt < 2:1865653/150‑1 (MQ=255) aaGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTcg > 2:488546/1‑150 (MQ=255) aaGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTcg > 2:2835195/1‑150 (MQ=255) gTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTcgcg > 2:7695/1‑150 (MQ=255) aaTCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCggg < 1:4235110/150‑1 (MQ=255) aaTCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCggg > 2:4836685/1‑150 (MQ=255) ccACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGttt < 1:2153595/150‑1 (MQ=255) ccACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGttt > 2:2246647/1‑150 (MQ=255) cacaCCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTc > 1:229376/1‑150 (MQ=255) cacaCCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTc < 1:397579/150‑1 (MQ=255) cacaCCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTc > 1:2933383/1‑150 (MQ=255) cacaCCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTc > 1:4959019/1‑150 (MQ=255) ccTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGa < 1:2106017/150‑1 (MQ=255) tGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAata > 2:2036419/1‑150 (MQ=255) gCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAatat < 2:2603460/150‑1 (MQ=255) cTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAAtata < 1:5328689/150‑1 (MQ=255) tCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAg < 2:1495440/150‑1 (MQ=255) cGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCNAAATCCACTCGCGGGTTTCGTGAATATAGc > 2:2523802/1‑150 (MQ=255) cGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGc < 1:3675786/150‑1 (MQ=255) gCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGa > 1:1886637/1‑150 (MQ=255) ccTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGAc < 1:3386378/150‑1 (MQ=255) cTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGAcc < 1:3535768/150‑1 (MQ=255) cTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCCCTCGCGGGTTTCGTGAATATAGCGAcc < 1:909134/150‑1 (MQ=255) cTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGAcc > 2:879443/1‑150 (MQ=255) cTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGAcc < 1:1407941/150‑1 (MQ=255) tGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCg > 2:3941823/1‑150 (MQ=255) cagcGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGgagag > 2:64665/1‑150 (MQ=255) agcGTGGCGCGGAACGCTTCCCAGGTAAGTTCTTCGGCGATCCCGTTACCCTTCTCCAGCGCCGGGTAGATCGGCACTGTACCGTTCGGCACCGGGCTGTTACGCAAAATCCACTCGGGGGTTTCGTGAATATAGCGACCGGTGgagagt < 2:2823164/150‑2 (MQ=255) gtgtCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATcc < 2:4373127/150‑1 (MQ=255) tgtCGCGGAACGCTTCCCCGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCa < 2:3365655/150‑1 (MQ=255) gcgGAACGCTTCCCTGTTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTATATCGGCACTGTACCGATCGGCACCGGGCTGTTACGAAAAATCCACTCGCGGGTTTCGTGAATATCGCGACCGGTGGAGAGATCCATCAc < 2:1100494/150‑1 (MQ=255) ggAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCg > 1:4321131/1‑150 (MQ=255) ggAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCg > 2:3247626/1‑150 (MQ=255) cGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATc > 1:818278/1‑150 (MQ=255) gCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATcc > 1:75457/1‑150 (MQ=255) gCTTCCCAGGTAAGATCGTCGGCGATCCCGTTCCCCTTCTCCAGGGCCGGGTAGATCGGCACTGTACCTAGGGGCACGGGGCTGTTAGGCAATCTCCACTCGGGGGTTTCGTGATTTTAGCGACCGGTGGAGAGATCCATCACCGTATcc < 2:2952100/150‑1 (MQ=255) ccAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTcc > 2:4969741/1‑150 (MQ=255) aGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTcccc < 2:5158844/150‑1 (MQ=255) ggTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCa > 2:299520/1‑150 (MQ=255) aaGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAgcg > 1:5222203/1‑150 (MQ=255) aGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAgcgc > 2:3623325/1‑150 (MQ=255) ttCGGCGATCCCGTTAACCTACCCCCGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGa < 2:4980873/150‑1 (MQ=255) cGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGAcc > 2:347793/1‑150 (MQ=255) gCGATCCCGTTACCCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCAt < 1:204287/150‑1 (MQ=255) gATCCCTTTAACCTTCTCCAGCGCCTGGTCGATCGGCACTGTCCCGATCGGCACGGGGCTGTTACGCAAAAGCCACTCGCGGGTTTCGTGAATATCGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATAc < 1:1987608/150‑1 (MQ=255) gATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATAc > 1:2416361/1‑150 (MQ=255) gATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATAc > 1:5125963/1‑150 (MQ=255) gATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATAc > 1:158950/1‑150 (MQ=255) cccGTTAACCTTCTCCCGCGCCTGGTAGATCGGCACTGTACCGATCGGCACAGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGAGAATATCGCGACCGGTGGAGAGATCCATCACCGAATCCGCTCCCCAGCGCGTGGACCATACCAg > 2:2344537/1‑150 (MQ=255) cccGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAg < 2:4737139/150‑1 (MQ=255) gTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCtt > 2:317477/1‑150 (MQ=255) ttAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCttt > 1:1716016/1‑150 (MQ=255) aaCCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTc > 1:2810354/1‑150 (MQ=255) aaCCTTCCCCAGCGCCTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTCCGAAAAATCCCCTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTc < 1:3765252/150‑1 (MQ=255) aCCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTcc > 1:2896717/1‑150 (MQ=255) tctcCCGCGCCTGGTTGATCGGCAGTGTACCGATCGGCACGGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCActt < 1:1076046/150‑1 (MQ=255) tctcCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCActt > 2:3920426/1‑150 (MQ=255) ctcCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCGGCTTTTCCActtc > 1:5115555/1‑150 (MQ=255) ccAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCActtctt > 2:2082402/1‑150 (MQ=255) aGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGTGCGTGGACCATACCAGCTTTTCCActtcttct > 1:2216861/1‑150 (MQ=255) aGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCActtcttct > 2:5329831/1‑150 (MQ=255) gcgcCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTACGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCActtcttctt < 2:3631659/150‑1 (MQ=255) ccTGGTAGATCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGa > 2:2739542/1‑150 (MQ=255) tggaataTCGGAACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGCGTTTAGTGAATATAGCGACCGGTGGAGAGATCAAACACCGTATCCGCTCCACAGCGCGTGGACCAAACAAGCTTATCAACTTCTTCTTCGAtc > 2:5032413/7‑149 (MQ=255) tGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATg > 2:4041601/1‑150 (MQ=255) tGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATg > 1:411249/1‑150 (MQ=255) ggTTGATCGGCAGTTTACCGTTCGGCACGGGGTTTTTACGCAAAATCCACTGGGGGGTTTGGTTAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATgg < 1:2832123/150‑1 (MQ=255) ggTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATgg > 1:1172646/1‑150 (MQ=255) gTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGa > 2:205840/1‑150 (MQ=255) tAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGaa > 1:97782/1‑150 (MQ=255) tAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGaa > 2:2205446/1‑150 (MQ=255) aGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAag < 2:3084851/150‑1 (MQ=255) aTCGGCACTGTACCTATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAagag < 1:4876397/150‑1 (MQ=255) aTCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAagag > 1:800291/1‑150 (MQ=255) gCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAAGAGGTGa < 2:4544529/150‑1 (MQ=255) tACCGATCGGCACGGGGCTGTTACGCAAAATCCCCTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAAGAGGTGAccgccg < 1:954902/150‑1 (MQ=255) aCCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAAGAGGTGACCGCCGa < 1:3838949/150‑1 (MQ=255) | ACATAGCGCAGCAGTACGCCCGCATGGATAGTGAAGTAATCCACACCTTGCTCGGCCTGTTCCAGCAGCGTGTCGCGGAACGCTTCCCAGGTAAGATCTTCGGCGATCCCGTTAACCTTCTCCAGCGCCTGGTAGATCGGCACTGTACCGATCGGCACCGGGCTGTTACGCAAAATCCACTCGCGGGTTTCGTGAATATAGCGACCGGTGGAGAGATCCATCACCGTATCCGCTCCCCAGCGCGTGGACCATACCAGCTTTTCCACTTCTTCTTCGATGGAAGAGGTGACCGCCGA > CP009273/4185006‑4185301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |