Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,241,153 G→T 8.9% pseudogene (265/1323 nt) yjbI → pseudogene, SopA‑related, pentapeptide repeats‑containing

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,241,1530GT 8.9% 1344.3 / 60.6 393pseudogene (265/1323 nt)yjbIpseudogene, SopA‑related, pentapeptide repeats‑containing
Reads supporting (aligned to +/- strand):  ref base G (205/152);  new base T (21/15);  total (226/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 397 total aligned reads displayed.

CTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCC  >  CP009273/4241004‑4241302
                                                                                                                                                     |                                                                                                                                                     
tttttttATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCg                                                                                                                                                       >  2:1827400/2‑150 (MQ=255)
cTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCg                                                                                                                                                       <  1:1363075/150‑1 (MQ=255)
  tttttATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGAt                                                                                                                                                     <  2:2663567/150‑1 (MQ=255)
       atcatcAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAg                                                                                                                                                >  2:2410635/1‑150 (MQ=255)
       atcatcAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAg                                                                                                                                                >  2:2371739/1‑150 (MQ=255)
          atcaAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGaaa                                                                                                                                             >  1:145427/1‑150 (MQ=255)
           tcaAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCTATTTCAGCaaa                                                                                                                                            >  1:298177/1‑150 (MQ=255)
           tcaAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCaaa                                                                                                                                            >  2:3552295/1‑150 (MQ=255)
             aaaTCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCTATTTCAGCaaaaa                                                                                                                                          <  2:1339185/150‑1 (MQ=255)
              aaTCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAat                                                                                                                                         <  1:801364/150‑1 (MQ=255)
              aaTCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAat                                                                                                                                         >  1:5166114/1‑150 (MQ=255)
              aaTCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAat                                                                                                                                         <  1:3550237/150‑1 (MQ=255)
               aTCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAata                                                                                                                                        >  2:1058331/1‑150 (MQ=255)
               aTCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAata                                                                                                                                        <  2:3494289/150‑1 (MQ=255)
                 cTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATAtt                                                                                                                                      <  2:2609420/150‑1 (MQ=255)
                   acaacaTGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCt                                                                                                                                    <  1:696796/150‑1 (MQ=255)
                      acaTGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGa                                                                                                                                 >  2:502509/1‑150 (MQ=255)
                       caTGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGAt                                                                                                                                <  1:1685937/150‑1 (MQ=255)
                        aTGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATa                                                                                                                               <  2:2552625/150‑1 (MQ=255)
                        aTGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATa                                                                                                                               >  2:3029732/1‑150 (MQ=255)
                         tGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCTATTTCAGCAAAAATATTCTTTATAc                                                                                                                              >  1:3807079/1‑150 (MQ=255)
                          gTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAAAATTCTTGATACa                                                                                                                             >  2:1612707/1‑150 (MQ=255)
                              cATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGAGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGttt                                                                                                                         <  2:1124854/150‑2 (MQ=255)
                               aTTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGa                                                                                                                        >  1:4432170/1‑150 (MQ=255)
                               aTTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTATTGATACAGTTGa                                                                                                                        >  1:2881081/1‑150 (MQ=255)
                                     aTGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTtctc                                                                                                                  >  1:4130575/1‑150 (MQ=255)
                                       gTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGc                                                                                                                >  2:5227684/1‑150 (MQ=255)
                                       gTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGc                                                                                                                <  1:2275451/150‑1 (MQ=255)
                                        tAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCa                                                                                                               >  2:2037047/1‑150 (MQ=255)
                                             aaaTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTc                                                                                                          >  2:4456973/1‑150 (MQ=255)
                                             aaaTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTc                                                                                                          >  2:2340389/1‑150 (MQ=255)
                                             aaaTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTc                                                                                                          <  1:2637627/150‑1 (MQ=255)
                                             aaaTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTc                                                                                                          >  1:4204779/1‑150 (MQ=255)
                                              aaTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCa                                                                                                         >  2:4520353/1‑150 (MQ=255)
                                              aaTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCa                                                                                                         >  2:4796911/1‑150 (MQ=255)
                                               aTTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCaa                                                                                                        >  2:1244910/1‑150 (MQ=255)
                                                   gggATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAATTGACTTCTCGCAGAGTCAACTTg                                                                                                    >  1:1503438/1‑150 (MQ=255)
                                                    ggATTGCAATTTTACTACTGCAATAGGTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTgg                                                                                                   <  1:2740084/150‑1 (MQ=255)
                                                     gATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGt                                                                                                  <  1:3685631/150‑1 (MQ=255)
                                                      aTTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTc                                                                                                 >  1:578662/1‑150 (MQ=255)
                                                        tGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCAt                                                                                               >  2:4616993/1‑150 (MQ=255)
                                                          cAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTATTGATACAGTTTACTTCTCGCAGAGTCAACTTGGTCATAg                                                                                             >  1:2027475/1‑150 (MQ=255)
                                                              tttACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAAt                                                                                         <  1:1987825/150‑1 (MQ=255)
                                                               ttACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATTAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAAtt                                                                                        <  2:1702551/150‑1 (MQ=255)
                                                                tactacTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAAttt                                                                                       >  2:849697/1‑150 (MQ=255)
                                                                tactacTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAAttt                                                                                       <  1:641139/150‑1 (MQ=255)
                                                                  ctactGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCTATTTCATCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTc                                                                                     <  2:3683457/150‑1 (MQ=255)
                                                                   tactGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTcg                                                                                    <  1:2604584/150‑1 (MQ=255)
                                                                     ctGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTcgcg                                                                                  >  1:221221/1‑150 (MQ=255)
                                                                         aaTAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATg                                                                              >  1:1626466/1‑150 (MQ=255)
                                                                          aTAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCTATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGt                                                                             >  2:710344/1‑150 (MQ=255)
                                                                            aGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCTCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCa                                                                           >  2:4138090/1‑150 (MQ=255)
                                                                              ttGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGa                                                                         <  1:4346247/150‑1 (MQ=255)
                                                                                gATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCCTAGTAATTTTAGCGAATGTCAGAtt                                                                       >  1:2110581/1‑150 (MQ=255)
                                                                                 aTAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCTATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTa                                                                      <  1:1813829/150‑1 (MQ=255)
                                                                                 aTAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTa                                                                      <  2:2804194/150‑1 (MQ=255)
                                                                                  tAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAg                                                                     <  1:5227684/150‑1 (MQ=255)
                                                                                  tAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAg                                                                     <  1:492097/150‑1 (MQ=255)
                                                                                   aaTGTCATATTTAGNTGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGa                                                                    >  2:2857305/1‑150 (MQ=255)
                                                                                   aaTGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTTATACAGTTGACTTCTCGCAGAGTCAACGTGGTCATAGTAATTTTCGCGAATGTCAGATTAgt                                                                    >  1:912826/1‑149 (MQ=255)
                                                                                     tGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGaaa                                                                  <  2:4233913/150‑1 (MQ=255)
                                                                                       tCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAAtt                                                                <  1:4017791/150‑1 (MQ=255)
                                                                                           atTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCaaa                                                            >  1:3881632/1‑150 (MQ=255)
                                                                                           atTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTAAGCAAAAATATTCTTGATACAGTTGACTTATAGCATAGTCAAAATGGTCATTCAAAATTTAGCGAAAGTCAGATTATAAAATCaaa                                                            >  1:4527036/1‑150 (MQ=255)
                                                                                            tttAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTTGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAAc                                                           >  1:1164615/1‑150 (MQ=255)
                                                                                               aGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTc                                                        >  1:3430084/1‑150 (MQ=255)
                                                                                               aGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTATTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTc                                                        >  1:5083988/1‑150 (MQ=255)
                                                                                                     cGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAAt                                                  <  1:3491248/150‑1 (MQ=255)
                                                                                                      gACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAAtt                                                 <  2:5164120/150‑1 (MQ=255)
                                                                                                       aCGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTg                                                >  1:1089994/1‑150 (MQ=255)
                                                                                                       aCGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTg                                                <  2:4865049/150‑1 (MQ=255)
                                                                                                           ttACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTAt                                            >  2:2889432/1‑150 (MQ=255)
                                                                                                           ttACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACGTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTAt                                            >  1:249536/1‑150 (MQ=255)
                                                                                                                    gtgATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCt                                   >  2:4281989/1‑150 (MQ=255)
                                                                                                                    gtgATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCt                                   >  1:3311045/1‑150 (MQ=255)
                                                                                                                            tATCACAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATTCAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACtt                           <  2:3307621/150‑1 (MQ=255)
                                                                                                                             aTCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACATCGATAAGTGTTATCTTTACGCTTCGCACTTc                          >  2:4713101/1‑150 (MQ=255)
                                                                                                                               cAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCAc                        <  1:4800089/150‑1 (MQ=255)
                                                                                                                               cAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCAc                        >  2:3204560/1‑150 (MQ=255)
                                                                                                                                aaaGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACATCGATAATTGTTATCTGTACGCTACGCACTTCAcc                       >  2:2890952/1‑150 (MQ=255)
                                                                                                                                  aGCGAGTGGTGAATGTGTCGATTTCAGAAAAAATATTCTTGATACAGTTGAATTCTCGCCGAGTCAACTTGGTCATAGTAATTTTAGCGAATGTCAGTTTAGAACTTCAAACTTCGATAATTGTTCTCTTTACGCTTCGCACTTCACcag                     >  2:624860/1‑150 (MQ=255)
                                                                                                                                      aGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTTAATTCTCGCAGAGTCAACTTGGTCATAGTAATTTTATCGAATGTCAGATTATAAATTCAAACTTCGATAAATTTTATCTTTACGCTTCGCACTTCACcagagca                 >  1:1727797/1‑150 (MQ=255)
                                                                                                                                      aGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTTCGCTTCGCACTTCACcagagca                 >  2:310840/1‑150 (MQ=255)
                                                                                                                                      aGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagca                 <  2:4019375/150‑1 (MQ=255)
                                                                                                                                       gtggtgAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagcag                >  2:5312545/1‑150 (MQ=255)
                                                                                                                                       gtggtgAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagcag                >  1:2405536/1‑150 (MQ=255)
                                                                                                                                            gAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGttt           >  1:1024649/1‑150 (MQ=255)
                                                                                                                                            gAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGttt           <  1:935081/150‑1 (MQ=255)
                                                                                                                                            gAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGttt           >  2:1005606/1‑150 (MQ=255)
                                                                                                                                             aaTGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtc          <  2:145427/150‑1 (MQ=255)
                                                                                                                                              aTGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtct         >  2:2722213/1‑150 (MQ=255)
                                                                                                                                               tgtgTCGATTTCAGCAAAAAAATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctg        >  2:3602130/1‑150 (MQ=255)
                                                                                                                                                gtgtCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgt       <  1:2686431/150‑1 (MQ=255)
                                                                                                                                                gtgtCGATTTCAGCAAAAATAATCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTAAGCTTCGCACTTCACCAGAGCAGAGTTtctgt       >  1:4300040/1‑150 (MQ=255)
                                                                                                                                                  gtCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgtct     <  1:2371739/150‑1 (MQ=255)
                                                                                                                                                  gtCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgtct     <  1:1940568/150‑1 (MQ=255)
                                                                                                                                                  gtCGATTTCAGCAAAAATATTATTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTAATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgtct     <  1:3076886/150‑1 (MQ=255)
                                                                                                                                                   tCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgtctg    <  1:3220137/150‑1 (MQ=255)
                                                                                                                                                    cGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGc   >  2:3909930/1‑150 (MQ=255)
                                                                                                                                                    cGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGc   >  2:1511007/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCC  >  CP009273/4241004‑4241302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: