| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,445,440 | C→A | 11.2% | intergenic (‑14/‑162) | fbp ← / → mpl | fructose‑1,6‑bisphosphatase I/UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,445,440 | 0 | C | A | 11.2% | 901.6 / 8.7 | 310 | intergenic (‑14/‑162) | fbp/mpl | fructose‑1,6‑bisphosphatase I/UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| Reads supporting (aligned to +/- strand): ref base C (158/101); new base A (2/49); total (160/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 316 total aligned reads displayed.
CCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAA > CP009273/4445291‑4445589 | ccAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTATTTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGc > 2:1586474/1‑150 (MQ=255)ccAGTCCTGCTTTGTTGATATCGCGATGGATAATCTAGGCGCCCAGTTTTATAGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAAATCACCTAACGAATACATAAAACTATCCCTGc > 1:5118829/1‑150 (MQ=255) ccTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGATTTCATAAAACTTTCCCTGCAATGt > 2:4435069/1‑150 (MQ=255) cTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTAt > 1:2394416/1‑150 (MQ=255) cTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTAt < 1:852029/150‑1 (MQ=255) tttGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATg < 2:1393895/150‑1 (MQ=255) tgttgATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACTGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTAGGGa > 2:3489355/1‑150 (MQ=255) tgATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTa < 1:2724100/150‑1 (MQ=255) atatCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTaaa < 2:4719012/150‑1 (MQ=255) atCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGATAACTCGTGCTGCTTTTCGACAATAAATTCACCTACCGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGc < 1:871112/150‑1 (MQ=255) atCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGc < 2:1619570/150‑1 (MQ=255) atCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGc < 2:1242297/150‑1 (MQ=255) atCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGc > 2:1049438/1‑150 (MQ=255) atCGCGATGGATAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCTCCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGc > 2:459273/1‑150 (MQ=255) gATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCg > 1:1747409/1‑150 (MQ=255) gATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCg > 2:598349/1‑150 (MQ=255) aTAATCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCTGTGAGCTCCCCGGTAGCATTAGAAAACTCGTGCTGCTTTTCGACAATAAATACACCTAACGTTTTCATAAAACTTTCCCTGCAATTTTTTTGGAGTAAAGCGACCGcaaca < 2:629751/150‑1 (MQ=255) tAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGcaacaa > 2:756659/1‑150 (MQ=255) tAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGcaacaa > 1:1625145/1‑150 (MQ=255) tAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGcaacaa > 1:4237331/1‑150 (MQ=255) aaTCTTGGCGCCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGcaacact > 2:4463558/1‑148 (MQ=255) ggCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTACATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAAc < 2:2608657/150‑1 (MQ=255) gcgcCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAATTTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACa < 2:5217577/150‑1 (MQ=255) gcgcCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACa > 2:2996281/1‑150 (MQ=255) cgcCCAGTGTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACaa > 2:3553920/1‑150 (MQ=255) gcCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACaaa > 1:3712280/1‑150 (MQ=255) aGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAaataat > 1:2025343/1‑150 (MQ=255) aGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAaataat > 2:1277026/1‑150 (MQ=255) tttttttTGCCTACAGAATTGCTGTGAGATCACCGTTTGAATTAGAAAAATCTTGTTGATTTTCTAAAATAAATTAACATAACTTTTTAATAAAACTTTCCCTGATTTGTTTTTGGATTAAAGCGACCGCAACAATCTTAACAAATAAtc < 2:2264159/149‑1 (MQ=255) ttttttTGCCGACAGCAAAGCTGTGAGCTCACCGGTAGCATGATAAAACTCGTGTTGATTTTCTAAAATAATTTCACATAACTTTTTCATAAAACTTTCCCTTCATTGTTTATGTATAAAAGCGACCGCAACAATCTTAACAAATAAtct < 1:4690308/150‑1 (MQ=255) aTTGCCGACAGAAAAGCAGTGAGCTCACCGGTAGATTTATAAAACTCGTGCTGCTTTTCTACAATAAATAAACCTAACTTTTTCATAAAACTTTCCCTGAAATTTTTATGGATTAAAGCGACCGCAACAATCTTAACAAATAATCTCAAt < 1:3014710/150‑1 (MQ=255) ggCCGACAGAAAAGCTGTGAGCTCACGGTTAGCTTGATAAAACTCGTGCTGCTTTTCGAAAATAATTTCACCTAACGTTTTAATAAAACTTTCCCGGAATTGTTTTTGGTTTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGt < 1:5206295/149‑1 (MQ=255) gCCTACAGCAAAGCAGTTAGCTCACCGGTAGAATGAGAAAACTCGTGCTGATTTTCGACAATAAATTCACATAACGTTTTCATAAAAATTTCCCTGAAATGTTTTTGTTTTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGtt < 2:5107742/150‑1 (MQ=255) gACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTgcg > 1:4400254/1‑150 (MQ=255) cAGAAATGCTGTGAGCTCACGGGTAGAATTACAAAACTCGTGCTGCTTTTCGAAAATAAATTCACCTAACGTTTTAATAAAACTTTCCCTGAATTTTTTTTGGATAAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCt < 1:2782463/150‑1 (MQ=255) agaaaaGCTGTGAGCCCACGGGTAGCATGATAAAACTGGTGCTGCTTTTCGAAAATAATTTCACATAACTTTTTAATAAAATTTTCCCTGAATTTTTTTTGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTc < 1:1960862/147‑1 (MQ=255) aGCAATGCAGTGAGCTCACGGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTACCGTTTTCATAAAACTTTCCCTGCATTTTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTc < 2:2810515/150‑1 (MQ=255) aGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGAGCTGCTGTTCGACAAAAAATTCAACTAACGTTTTCATAAAACTTTCCCTGAAATGTTTATGGAGTAAAGCGACCGCACCAATCTTAACAAATAATCTCAATGtatcgatc > 1:2142170/1‑143 (MQ=255) gCAAAGCAGTGAGCTCACCGGTAGCATGATAAAACTCGTGCTGCTTTTCGAAAATAAATTCAACTAACGTTTTCATAAAACTTTCCCTGCAATGTTTTTGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCa < 2:2174388/150‑1 (MQ=255) aaaGCTGGGAGCTCACCGGTAGCATGACAAAACTGGTGCTGCTTTTCTAAAATAATTTCACCTAACGTTTTAATAAAAATTTCCCTGAAATTTTTTTGTAGAAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAgg < 1:2443450/150‑1 (MQ=255) aaaGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAgg > 1:4332895/1‑150 (MQ=255) aGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTg > 2:1682397/1‑150 (MQ=255) gCAGTGAGCTCACCGGTAGCATGATAAAACTCGTGCTGATTTTCGACAATAAATTCACCTACCGTTTTCAAAAAACTTTCCCTGAAATTTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGa < 1:2202782/150‑1 (MQ=255) cAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGaa > 1:4549869/1‑150 (MQ=255) aGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAAt > 1:5004566/1‑150 (MQ=255) aGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAAt > 1:2958725/1‑150 (MQ=255) gTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATc < 2:4781827/150‑1 (MQ=255) cTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGcc > 1:2693957/1‑150 (MQ=255) cACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAg > 1:3357395/1‑150 (MQ=255) cGGTAGAATGAGAAAACTCGTGCTGCTTTTCGAAAATAAATTCACCTACCGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCaa < 2:187706/150‑1 (MQ=255) tgTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCaaa > 1:260189/2‑150 (MQ=255) ggTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCaaa > 1:347977/1‑150 (MQ=255) aaTGATAAAACTCGTGATGCTTTTCTAAAATAAATTCACCTAACTTTTACAAAAAATTTTCCCTGAAATTTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACg < 1:3916744/149‑1 (MQ=255) aTGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACgg > 2:427909/1‑150 (MQ=255) gagaAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGAt > 1:786750/1‑150 (MQ=255) gagaAAACACGTGCTGCTTTTCGAAAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCATTGTTTATGTAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGAt < 2:2673210/150‑1 (MQ=255) agaAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGAtt > 1:2543415/1‑150 (MQ=255) gaAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTa > 1:116967/1‑150 (MQ=255) atctggTGCTGGTTTTCGAAAATATATTCCCCTACCTTTTACATAAAACTTTCCCTGAATTTTTTTTGGATTAACGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATcc < 1:1390577/145‑1 (MQ=255) aaCTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATca > 1:3174963/1‑149 (MQ=255) aCTCGTGCTGATTTTCCACAATAAATACACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTTTGGAGTAACGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCt < 2:4920626/150‑1 (MQ=255) tgctgcTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAAt > 2:3904397/1‑150 (MQ=255) ctgctTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGc > 2:2523129/1‑150 (MQ=255) ttctTTTCTACAATAAATAACCCTAACTTTTTAATAAAACTTTCCCTGATCTGTTTATGGAGAAAAGCGACCGCAACAATCTTAACAAATAATATCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGCTTATCCTGAAATGCg < 2:4387607/148‑1 (MQ=255) ggctTTTCGACAATAACTACACCTACCTTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCg < 1:1491920/149‑1 (MQ=255) gctTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGt > 2:1532538/1‑150 (MQ=255) gctTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGt < 2:2025337/150‑1 (MQ=255) ttttCGACATTAAATTCACCTAACGTTTTAATAAAACTTTCCCTGAATTTTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGttt < 1:3251714/150‑1 (MQ=255) ttttCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGttt < 2:2126525/150‑1 (MQ=255) ttttCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGttt > 2:2408251/1‑150 (MQ=255) tttCGACAATAAATTCCCCTAACGTTTCCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTtc < 2:2732226/150‑1 (MQ=255) tttCGACAATAAATACACCTAACTTTTTAATAAAAATTTCCCTGCAATGTTTTTGTTTAAACGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTtc < 1:1902778/150‑1 (MQ=255) aCAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACt > 2:917536/1‑150 (MQ=255) aaaTTCAACTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGccc < 2:3053915/150‑1 (MQ=255) aTTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGa > 1:4868318/1‑150 (MQ=255) ttCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGAc > 2:891417/1‑150 (MQ=255) ttCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGAc < 1:3061909/150‑1 (MQ=255) tCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCATGAAATGCGTTTCTCTCTTGCACGACa > 2:3311101/1‑150 (MQ=255) cACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACat > 2:2882972/1‑150 (MQ=255) cTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATg > 2:3643811/1‑150 (MQ=255) cTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATg < 2:3146512/150‑1 (MQ=255) tAATGTTTTAATAAAAATTTCCCTTAATTTTTTTTGGTTTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGc < 1:1873384/150‑1 (MQ=255) atctttttCAAAAATCTTTCCCTGCAGTTTTTTTGTTGTAAAGCGACCGCAACAATCTTAACAAATAATCTCACTGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCg < 1:606261/146‑1 (MQ=255) aaCGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCg > 1:1275216/1‑150 (MQ=255) aaCGTTTACATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCg < 2:3816640/150‑1 (MQ=255) cGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTa > 1:3407738/1‑150 (MQ=255) tttttCATAAAACTTGCCCTGCATTGTTTTTGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTaa < 1:1001332/149‑1 (MQ=255) gtattCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTTCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTaa > 2:4556732/4‑150 (MQ=255) gTTTTCATAAAACTTTCCCTGAAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCTCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCTACATATGCGTaa > 1:5060742/1‑150 (MQ=255) tttCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTaaaa > 1:4821145/1‑150 (MQ=255) ttCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAAt > 2:691407/1‑150 (MQ=255) tCATAAAACTTTCCCTGCATTGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATg < 1:3824081/150‑1 (MQ=255) tAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGc < 2:3414502/150‑1 (MQ=255) aaaaCTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCg > 2:4201059/1‑150 (MQ=255) aaaCTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCgg > 1:4655519/1‑150 (MQ=255) tttCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGa < 2:4011346/150‑1 (MQ=255) ttCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGAt > 1:2916503/1‑150 (MQ=255) ttCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGAt < 2:3217582/150‑1 (MQ=255) ttCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGAt > 2:3729918/1‑150 (MQ=255) ttCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGAt < 1:756659/150‑1 (MQ=255) | CCAGTCCTGCTTTGTTGATATCGCGATGGATAATCTTGGCGCCCAGTTTTATTGCCGACAGCAAAGCAGTGAGCTCACCGGTAGCATGAGAAAACTCGTGCTGCTTTTCGACAATAAATTCACCTAACGTTTTCATAAAACTTTCCCTGCAATGTTTATGGAGTAAAGCGACCGCAACAATCTTAACAAATAATCTCAATGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAA > CP009273/4445291‑4445589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |