| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,499,530 | G→T | 28.5% | pseudogene (705/785 nt) | insO → | pseudogene, IS911 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,499,530 | 0 | G | T | 28.5% | 645.1 / 208.5 | 319 | pseudogene (705/785 nt) | insO | pseudogene, IS911 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related |
| Reads supporting (aligned to +/- strand): ref base G (101/126); new base T (39/53); total (140/179) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 325 total aligned reads displayed.
AACTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGC > CP009273/4499383‑4499679 | aaCTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGaa > 1:2744658/1‑150 (MQ=255) aCTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAat < 2:3628349/150‑1 (MQ=255) gATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAAtggt > 1:2454371/1‑150 (MQ=255) aTAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAAtggtg < 2:3970349/150‑1 (MQ=255) aTAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAAtggtg < 1:3052035/150‑1 (MQ=255) aGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTa > 1:1720240/1‑150 (MQ=255) cacAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTacc > 2:296136/3‑150 (MQ=255) ccATTGGAGCGCTTCTTCAGGATTCTGAAGAACGATTGGGTGCCATCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCTATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTacca < 1:4525567/150‑1 (MQ=255) cAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTaccac < 1:1923507/150‑1 (MQ=255) gagaGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAAc < 1:1409643/150‑1 (MQ=255) gAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAc < 1:399531/150‑1 (MQ=255) aGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACg > 1:2851136/1‑150 (MQ=255) aGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATACAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACg > 1:1840580/1‑150 (MQ=255) cgcTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGaa > 1:1862735/1‑150 (MQ=255) cgcTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGaa > 2:1759002/1‑150 (MQ=255) gcTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAAt < 1:5114910/150‑1 (MQ=255) ttcttcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCa < 1:360649/150‑1 (MQ=255) ttcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaa < 2:2392077/150‑1 (MQ=255) tcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGaaa < 1:4726812/150‑1 (MQ=255) cAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaaaa > 2:439799/1‑150 (MQ=255) gAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCg < 2:351569/150‑1 (MQ=255) gAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCg < 1:3095988/150‑1 (MQ=255) gTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGAt > 1:2151028/1‑150 (MQ=255) tCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATa < 1:2027491/150‑1 (MQ=255) cTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATAc < 2:4105730/150‑1 (MQ=255) gaagaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTg > 1:3465190/1‑150 (MQ=255) aagaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTgg < 2:5208507/150‑1 (MQ=255) agaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGa > 2:120320/1‑150 (MQ=255) cGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGaaaaa < 1:4165975/150‑1 (MQ=255) gAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAAc < 1:4324969/150‑1 (MQ=255) aaTGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAAct < 1:167016/150‑1 (MQ=255) aTGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAActc > 2:103255/1‑150 (MQ=255) aTGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAActc < 2:5207915/150‑1 (MQ=255) tGGGTGCCTGCGACGGGCTATGTTAGCTTCAGCGATGCTGCTCACTCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATTATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAActct < 1:797141/150‑1 (MQ=255) tGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAActct < 2:590308/150‑1 (MQ=255) gggTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTa < 2:155116/150‑1 (MQ=255) gggTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTa < 1:3661797/150‑1 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAAc < 1:4702055/150‑1 (MQ=255) tGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAAcg < 2:2869932/150‑1 (MQ=255) cGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCa < 1:426064/150‑1 (MQ=255) ggCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt > 1:2819682/1‑150 (MQ=255) cTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGttt < 2:2744658/150‑1 (MQ=255) cTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGttt > 1:3919756/1‑150 (MQ=255) tATGTAAGCTTCGGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtttt < 1:969920/150‑1 (MQ=255) tGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAg < 1:1016801/150‑1 (MQ=255) gTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGt < 1:4437611/150‑1 (MQ=255) tAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGtt < 1:4841254/150‑1 (MQ=255) aGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGa > 1:2875504/1‑150 (MQ=255) cTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGAcc < 2:3734409/150‑1 (MQ=255) gCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACt < 1:1471654/150‑1 (MQ=255) gCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACt > 2:4304634/1‑150 (MQ=255) aGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAc < 2:1326791/150‑1 (MQ=255) aGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAc > 2:505201/1‑150 (MQ=255) cTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGTCCACAACAGACTACCt < 2:4572156/150‑1 (MQ=255) cTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCt < 2:1640308/150‑1 (MQ=255) tCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTg < 1:505448/150‑1 (MQ=255) aCGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGaa > 1:5248118/1‑150 (MQ=255) cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAggg < 1:1582387/150‑1 (MQ=255) cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAggg > 1:128881/1‑150 (MQ=255) aaTAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGa < 1:2346788/150‑1 (MQ=255) aTAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAg > 2:679044/1‑150 (MQ=255) aaCGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGcc > 2:3214573/1‑150 (MQ=255) gACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCgg > 1:567019/1‑150 (MQ=255) gACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCgg > 2:1100210/1‑150 (MQ=255) cTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTc < 2:3055154/150‑1 (MQ=255) cTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTc < 2:1375744/150‑1 (MQ=255) tatCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGcc > 1:3508696/1‑150 (MQ=255) atCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCt > 1:4586957/1‑150 (MQ=255) tCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGTCCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTg < 2:4980709/150‑1 (MQ=255) cGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTgg > 1:319892/1‑150 (MQ=255) cGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTgg > 1:4630101/1‑150 (MQ=255) ttGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCa > 2:847931/1‑150 (MQ=255) tGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAg > 1:3943556/1‑150 (MQ=255) ggATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGt > 2:4701721/1‑150 (MQ=255) ggATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGt < 1:1120829/150‑1 (MQ=255) ggATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGt > 2:2540889/1‑150 (MQ=255) ggATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGt < 1:1748688/150‑1 (MQ=255) gATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGtt > 1:2587957/1‑150 (MQ=255) gATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGtt < 1:2636182/150‑1 (MQ=255) tatTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGc > 2:2160596/1‑150 (MQ=255) atTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCa > 1:71729/1‑150 (MQ=255) ttACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAg < 2:917644/150‑1 (MQ=255) aCAGCGCACTAAGCCCGCACGAAGATACTGGTGGGTTACCACCAAACGACTCAGAAAACCGCTACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACGACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTa < 2:4554566/150‑1 (MQ=255) aCAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTa > 1:3774261/1‑150 (MQ=255) aGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAACCCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGc < 1:4109998/150‑1 (MQ=255) gcgcACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCa > 1:1193031/1‑150 (MQ=255) cACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGga > 1:3579689/1‑150 (MQ=255) cACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGga > 1:2412704/1‑150 (MQ=255) tAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGat > 1:225228/1‑150 (MQ=255) aaGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatc < 2:2608215/150‑1 (MQ=255) aaGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatc < 2:3465190/150‑1 (MQ=255) aGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatca < 1:439799/150‑1 (MQ=255) aGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatca < 2:190339/150‑1 (MQ=255) gACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatcat < 1:3823678/150‑1 (MQ=255) aCCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatcatc < 2:4833273/150‑1 (MQ=255) cGCACTAATATAATGGTGGGTTACCACCAAACGCATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:1836468/150‑1 (MQ=255) gCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAg > 1:1520917/1‑150 (MQ=255) gCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGTCCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAg > 1:670716/1‑150 (MQ=255) gAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGTCCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGc > 1:2127131/1‑150 (MQ=255) gAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGc > 1:169125/1‑150 (MQ=255) | AACTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGC > CP009273/4499383‑4499679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |