| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,546,672 | G→T | 26.0% | intergenic (‑535/‑138) | yjiC ← / → iraD | uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,546,672 | 0 | G | T | 26.0% | 664.2 / 179.7 | 308 | intergenic (‑535/‑138) | yjiC/iraD | uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor |
| Reads supporting (aligned to +/- strand): ref base G (117/110); new base T (46/35); total (163/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 309 total aligned reads displayed.
GTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCG > CP009273/4546523‑4546817 | gTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTg < 1:2083693/150‑1 (MQ=255) gACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGAc > 2:3854510/1‑150 (MQ=255) cAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTTTACTTTGCTGACAg > 2:1615896/1‑150 (MQ=255) cAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATAATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAg > 2:3114184/1‑150 (MQ=255) aaGTATTTTCATCTACGTAACTATTAGGAATATTAAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAgg < 1:1761628/150‑1 (MQ=255) aGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGa < 1:1482069/150‑1 (MQ=255) aGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGa > 1:4745352/1‑150 (MQ=255) gTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGAt > 2:368871/1‑150 (MQ=255) gTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATATGCAAGTAAGGTTTTATACTTTGATGACAGGAt > 1:2283159/1‑150 (MQ=255) ttttCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATAATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAATGTTTTATACTTTGCTGACAGGATTCa > 1:942057/1‑150 (MQ=255) gTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCa > 2:1705458/1‑150 (MQ=255) tAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAg > 2:4587805/1‑150 (MQ=255) cTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGATTTTGATTATTTTTATAAAATAATTACTTTTTTACTGTAAATTAATTAGATATTAATATGCAAGTAAGGTTTTATAATTTGCTGACAGGATTCAGGCCTGTCTCAGACt > 1:1467668/1‑150 (MQ=255) aTTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATTATTTTTATAAAATAATTACATTTTTAATGAAAATTAAGTAGATATTAATATGCAAGTTAGGTTTTTTAAATTTCTTAAAGGATTCAGGCCTTTATCAGACTg > 1:1022994/1‑150 (MQ=255) tCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACa < 1:1402246/150‑1 (MQ=255) cGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACAt < 1:4797036/150‑1 (MQ=255) gAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATAATTTGCTGACAGGATTCAGGCCTGTCTCATACTGACATgg > 2:4904962/1‑150 (MQ=255) tatTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATg < 2:2150180/150‑1 (MQ=255) atTCAGAATATACTAGCGG‑TTTTTTTTTGTGTTTTATGATTTTTATAAAATAAATAATTTTTTACAGAAAAGTAAGTATATATTAATAGGCAAATAATGTTTTATACATTTCTGACAGGATTAATGCCAGTCTAAGACTGACATTGAAGt > 1:2303928/1‑150 (MQ=255) gAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATg < 2:2618675/150‑1 (MQ=255) atatACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATTACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATAATTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATTTAATGAAc > 2:2418639/1‑150 (MQ=255) taCTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATAAAATCATTACTTTTTTCCTGAAAATTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTTATTAAAGGATTCATGCCTGTCTCAGACAGACATGGATGTAATGaaaaaa > 1:2868244/1‑150 (MQ=255) cTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAg < 2:3029102/150‑1 (MQ=255) cTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAg > 2:4534479/1‑150 (MQ=255) cTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAg < 2:1176673/150‑1 (MQ=255) tAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTANTGAACAAAAgg < 1:2762856/150‑1 (MQ=255) aGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTATATATTCATAGGCAAGTAAGGTTTTATAATTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAggg > 1:22690/1‑150 (MQ=255) aGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAggg < 2:64154/150‑1 (MQ=255) cGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTACTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACATTGCTTACAGGATTAAGGCCTGTATCAGACTGACATGGATGTAATGAAAAAAAGGGaa > 1:2468118/1‑150 (MQ=255) gg‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAAt < 2:5146567/150‑1 (MQ=255) g‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATg < 2:842873/150‑1 (MQ=255) ggttttttttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATg > 2:3802265/3‑150 (MQ=255) tttttttttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATgg < 2:3547533/150‑1 (MQ=255) tttttttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCt < 1:4198267/150‑1 (MQ=255) tttttttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCt < 1:724085/150‑1 (MQ=255) tttttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTAt < 1:3535958/150‑1 (MQ=255) tttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATgg < 1:36888/150‑1 (MQ=255) tGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTAGACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGaa < 2:4743117/150‑1 (MQ=255) aGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGaaaa > 2:4666995/1‑150 (MQ=255) gTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAAt < 1:2153101/150‑1 (MQ=255) tttGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATg > 2:544943/1‑150 (MQ=255) tttGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATg > 2:3677577/1‑150 (MQ=255) tttGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATg > 1:1241149/1‑150 (MQ=255) ttGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGa < 1:2365271/150‑1 (MQ=255) tgatgaTTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAg > 2:2935760/1‑150 (MQ=255) gatgatTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGc < 2:882252/150‑1 (MQ=255) gatgatTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGc < 2:2563293/150‑1 (MQ=255) gatgatTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGc < 1:2577881/150‑1 (MQ=255) atTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATTGCTATGGAAAATGAGCATCa < 1:3870720/150‑1 (MQ=255) tATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACa < 1:4543387/150‑1 (MQ=255) tATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACa > 2:4050964/1‑150 (MQ=255) tCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgt < 2:1328451/150‑1 (MQ=255) cAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgtg < 2:530145/150‑1 (MQ=255) aaaTCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgtgg > 1:1688959/1‑150 (MQ=255) aaTCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgtggt < 2:1974243/150‑1 (MQ=255) aTCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAgtggtg > 1:1367671/1‑150 (MQ=255) cTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGgtg > 2:11092/1‑150 (MQ=255) cTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGgtg < 2:3845650/150‑1 (MQ=255) ttgtCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTc < 1:5113079/147‑1 (MQ=255) tttCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCa < 1:2646927/150‑1 (MQ=255) tttCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCa < 2:4437192/150‑1 (MQ=255) tCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAgg < 1:776624/150‑1 (MQ=255) ccTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAggg < 1:4771519/150‑1 (MQ=255) cTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGc < 1:2936341/150‑1 (MQ=255) aaaaGTCAGTAGATATTCATAGGCAAGTAATGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAg < 1:518989/150‑1 (MQ=255) aaGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGcc < 1:3625970/150‑1 (MQ=255) gTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGc > 2:5234935/1‑150 (MQ=255) tCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCa > 2:2465044/1‑150 (MQ=255) aGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCata > 2:810375/1‑150 (MQ=255) aGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTGATGAACAAAAGGGAATGGCGATGGAAAATGAGCCTCAATACAGGGGTGCCCGGTGTTCAGGGCGAGCCGctgc > 2:5113661/1‑147 (MQ=255) tAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATg < 1:1890665/150‑1 (MQ=255) aGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGt > 2:3385417/1‑150 (MQ=255) aGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGt > 1:1809893/1‑150 (MQ=255) atatTCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTg > 2:4485614/1‑150 (MQ=255) tCATAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTaa < 2:3284845/150‑1 (MQ=255) cATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTaaa < 1:3223153/150‑1 (MQ=255) aTAGGCAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCACGCCGCATATGTTGCTAAAc > 2:2388006/1‑150 (MQ=255) gaGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCCGATGTTGCTAAACg < 2:1532798/149‑1 (MQ=255) cAAGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAg > 1:5277870/1‑150 (MQ=255) cAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAg < 2:2009193/150‑1 (MQ=255) aaGTAAGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAgg > 1:4396213/1‑150 (MQ=255) aaGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAgg > 1:2994192/1‑150 (MQ=255) aGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGa > 2:684164/1‑150 (MQ=255) aGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGa < 2:4796024/150‑1 (MQ=255) gTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAg < 2:2761572/150‑1 (MQ=255) aaGGTTTTATACTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTg > 1:4554533/1‑150 (MQ=255) aaGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTg > 2:192233/1‑150 (MQ=255) ggTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTgcg > 2:4999575/1‑150 (MQ=255) tataCTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCaaaa > 1:3042296/1‑150 (MQ=255) tataCTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCaaaa > 2:2348436/1‑150 (MQ=255) ataCTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAat > 1:465475/1‑150 (MQ=255) ataCTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAat > 2:4824266/1‑150 (MQ=255) ataCTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAat < 1:3253864/150‑1 (MQ=255) taCTTTGCTTACAGGATTCATGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatg > 1:154221/1‑150 (MQ=255) taCTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatg > 1:1321852/1‑150 (MQ=255) cTTTGCTTACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatgat > 2:5166415/1‑150 (MQ=255) cTTTGCTGACAGGATTCAGTCCTGTCTAAGACTGACATGGTTGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCTAAatgat < 1:2503480/150‑1 (MQ=255) cTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatgat > 1:2248243/1‑150 (MQ=255) cTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatgat < 2:942057/150‑1 (MQ=255) tGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCg < 1:4999930/150‑1 (MQ=255) | GTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGG‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCG > CP009273/4546523‑4546817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |