| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,588,180 | G→T | 100% | S360* (TCA→TAA) | opgB ← | phosphoglycerol transferases I and II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,588,180 | 0 | G | T | 98.7% | 981.1 / 2.1 | 309 | S360* (TCA→TAA) | opgB | phosphoglycerol transferases I and II |
| Reads supporting (aligned to +/- strand): ref base G (4/0); new base T (142/163); total (146/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 309 total aligned reads displayed.
TGCTTATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACTTTTTCCACGCT > CP009273/4588033‑4588326 | tGCTTATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTAc > 2:3750769/1‑150 (MQ=255)tGCTTATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTAc > 1:1825346/1‑150 (MQ=255) gCTTATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACt > 1:76089/1‑150 (MQ=255) cTTATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTg > 2:2357780/1‑150 (MQ=255) tATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGAt < 2:4651677/150‑1 (MQ=255) tATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGAt > 2:1155726/1‑150 (MQ=255) ttGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTc < 2:3003398/150‑1 (MQ=255) gTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGttt > 2:1286411/1‑150 (MQ=255) tATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTa < 1:993087/150‑1 (MQ=255) tATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTa < 1:3117252/150‑1 (MQ=255) aTTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTAc > 1:1304449/1‑150 (MQ=255) aTTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTAc > 1:3911919/1‑150 (MQ=255) tttCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTAcc < 2:2759119/150‑1 (MQ=255) tttCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTAcc < 2:4563847/150‑1 (MQ=255) ccACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTc < 2:4241526/150‑1 (MQ=255) ccACGCAGTGTTGTTCTTCGCTAAATGGTCAGATGTGACGACGATGACGGTATCTTTAAACCACGGTGACTCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTTGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTc < 1:1589336/150‑1 (MQ=255) tgCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCaaa > 1:2620286/2‑150 (MQ=255) gCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCaaaa > 1:1733687/1‑150 (MQ=255) ccGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAAt < 1:3848248/150‑1 (MQ=255) cGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATc < 2:1406734/150‑1 (MQ=255) cGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATc > 1:3085728/1‑150 (MQ=255) gttgttCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCata > 1:2935023/1‑150 (MQ=255) ttgttCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCatat < 2:2701866/150‑1 (MQ=255) gttCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATAttt < 1:2402649/150‑1 (MQ=255) tCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATAttttt > 1:4907554/1‑150 (MQ=255) cATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATAtttttt < 1:4231356/150‑1 (MQ=255) cATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATAtttttt < 1:1775539/150‑1 (MQ=255) aTCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTg > 1:2850211/1‑150 (MQ=255) gCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCgg > 2:3134618/1‑150 (MQ=255) gCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCgg > 1:693975/1‑150 (MQ=255) tAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGtt > 1:648129/1‑150 (MQ=255) tGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAg < 2:4507352/150‑1 (MQ=255) gTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGt < 1:2208673/150‑1 (MQ=255) tCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTa > 1:2501050/1‑150 (MQ=255) tCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTa < 2:1616223/150‑1 (MQ=255) cAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAc < 1:1969785/150‑1 (MQ=255) agaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACg > 1:608739/1‑150 (MQ=255) gaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACga > 1:2056530/1‑150 (MQ=255) aagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgag > 2:5175737/1‑150 (MQ=255) gagaCGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagag < 1:2024646/150‑1 (MQ=255) agaCGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagaga > 1:3735404/1‑150 (MQ=255) gaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAcc < 1:4025724/150‑1 (MQ=255) aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc > 2:310202/1‑150 (MQ=255) cGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCg > 1:4429795/1‑150 (MQ=255) ggTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTTCAGGTACGAGAGATAAAACCATCCgg > 1:4113981/1‑150 (MQ=255) ggTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCgg > 1:74198/1‑150 (MQ=255) gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCggg > 2:2806462/1‑150 (MQ=255) gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCggg > 1:2240781/1‑150 (MQ=255) aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTg < 2:3236144/150‑1 (MQ=255) aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTg < 2:4908006/150‑1 (MQ=255) aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTg > 2:1696611/1‑150 (MQ=255) aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTg < 2:3927318/150‑1 (MQ=255) aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTg > 1:2159670/1‑150 (MQ=255) aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCAACCGGGTg > 1:3285527/1‑150 (MQ=255) ttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATgg > 1:4489233/1‑150 (MQ=255) aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTa > 2:4339004/1‑150 (MQ=255) aCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTAt < 1:5101569/150‑1 (MQ=255) aCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTAt < 1:3659208/150‑1 (MQ=255) ccACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATc < 1:5248596/150‑1 (MQ=255) cACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCg < 2:1546737/150‑1 (MQ=255) aCGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGa < 2:480079/150‑1 (MQ=255) cGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGAc < 2:2583437/150‑1 (MQ=255) ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACt < 1:4154442/150‑1 (MQ=255) gACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTc > 1:1192043/1‑150 (MQ=255) aCGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCa < 1:4276293/150‑1 (MQ=255) tttGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGt < 1:1150579/150‑1 (MQ=255) tGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTaa < 1:3638949/150‑1 (MQ=255) tgttgATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTg < 2:5319298/150‑1 (MQ=255) gttgATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTga < 2:730864/150‑1 (MQ=255) ttgATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTgag < 1:1041131/150‑1 (MQ=255) gATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGaa > 2:4771339/1‑150 (MQ=255) aTAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAAt < 2:4473239/150‑1 (MQ=255) tAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATc > 2:4271361/1‑150 (MQ=255) cGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTg > 1:4197487/1‑150 (MQ=255) cgcgATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGAcc > 2:2020663/1‑150 (MQ=255) gcgATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCt < 1:3750617/150‑1 (MQ=255) cgATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTg > 2:2208328/1‑150 (MQ=255) cgATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTg < 2:4123798/150‑1 (MQ=255) gATGTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGTTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCtta > 1:3021913/1‑148 (MQ=255) gTTCTCCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCg < 2:638883/150‑1 (MQ=255) tctcCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCggg < 1:4739758/150‑1 (MQ=255) tcCTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGaa < 2:243095/150‑1 (MQ=255) ccTGGCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGaaa > 2:763238/1‑150 (MQ=255) cTGGCTGCAACTTACCGCGCTGAATTACTGAGTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAg < 1:2088713/150‑1 (MQ=255) ggCTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGct < 1:326156/150‑1 (MQ=255) cTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGctct < 2:5260669/150‑1 (MQ=255) cTGCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGctct < 2:1106009/150‑1 (MQ=255) gCAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTATGCGGATACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCTCTGACCTGAGCGGGAAAGCTCTTc > 1:2292497/1‑150 (MQ=255) cAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCa < 2:2278191/150‑1 (MQ=255) cAACTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCa > 2:3972370/1‑150 (MQ=255) cTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAAc < 1:354794/150‑1 (MQ=255) cTTACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAAc > 1:2911103/1‑150 (MQ=255) ttACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACt > 2:5056633/1‑150 (MQ=255) ttACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACt > 1:4171042/1‑150 (MQ=255) ttACCGCGCTGAATTACTGATTAGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACt < 2:3627484/150‑1 (MQ=255) tACCGCGCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACtt < 2:2505081/150‑1 (MQ=255) cgcgCTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGTGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACttttt > 2:1785345/1‑150 (MQ=255) gcTGAATTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACTTTTTCCa < 1:1278295/150‑1 (MQ=255) aaTTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACTTTTTCCACGCt > 1:1469013/1‑150 (MQ=255) aaTTACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACTTTTTCCACGCt > 2:4138597/1‑150 (MQ=255) | TGCTTATTGAGGTATTTCCACGCCGTGTTGTTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGTGATGGGTATCGACTGTCAGGGTAAACAGTGAGAATCGCTGACCTGAGCGGGAAAGCTCTTCAAACTTTTTCCACGCT > CP009273/4588033‑4588326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |