| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 407,711 | G→T | 12.2% | A76E (GCG→GAG) | araJ ← | arabinose‑inducible putative transporter, MFS family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 407,711 | 0 | G | T | 12.2% | 1035.7 / 76.2 | 321 | A76E (GCG→GAG) | araJ | arabinose‑inducible putative transporter, MFS family |
| Reads supporting (aligned to +/- strand): ref base G (134/147); new base T (18/21); total (152/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
Only 100 of 326 total aligned reads displayed.
TGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGT > CP009273/407562‑407859 | tGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACg < 1:3501323/150‑1 (MQ=255)tGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACg > 1:1250184/1‑150 (MQ=255)tGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACg > 1:1834429/1‑150 (MQ=255)tGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACg > 1:2000024/1‑150 (MQ=255)tGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACg < 1:2510977/150‑1 (MQ=255) aCTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGcc < 1:4797041/150‑1 (MQ=255) cTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGcca > 2:4213269/1‑150 (MQ=255) gggTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGaaa < 2:540399/150‑1 (MQ=255) ggTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAaac < 1:3146012/150‑1 (MQ=255) ggTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAaac < 1:3716286/150‑1 (MQ=255) gTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAaaca < 2:2312146/150‑1 (MQ=255) gATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAAcaacaa < 1:709525/150‑1 (MQ=255) gATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAAcaacaa < 1:4024481/150‑1 (MQ=255) aTAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAg < 2:3687776/150‑1 (MQ=255) tAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGa > 1:678176/1‑150 (MQ=255) ttGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGtt < 1:496553/150‑1 (MQ=255) gATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtg < 2:763115/150‑1 (MQ=255) gATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtg < 2:2879798/150‑1 (MQ=255) tAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtgag < 1:3990335/150‑1 (MQ=255) tAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtgag > 1:4116707/1‑150 (MQ=255) aaCACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCACTGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTGGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtgagt < 2:3010647/150‑1 (MQ=255) aaCACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAACCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtgagt < 1:3393440/150‑1 (MQ=255) acGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTtgagtgag < 1:2797373/150‑1 (MQ=255) gATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTa < 1:2245289/150‑1 (MQ=255) gATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTa > 1:4634124/1‑150 (MQ=255) gATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTa > 2:69530/1‑150 (MQ=255) aTCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAg < 1:2902540/150‑1 (MQ=255) tCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGc < 1:3941953/150‑1 (MQ=255) cGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCg > 2:5265295/1‑150 (MQ=255) gACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGa > 1:5110073/1‑150 (MQ=255) aCGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGaa > 2:1988902/1‑150 (MQ=255) cGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGaca > 1:1557097/1‑148 (MQ=255) cGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGaaa > 1:2933697/1‑150 (MQ=255) cAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAaga < 1:2294847/150‑1 (MQ=255) cAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAaga > 2:1125766/1‑150 (MQ=255) aaaaaaTGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAagag > 1:3431530/1‑150 (MQ=255) aaaTGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGc > 2:4794994/1‑150 (MQ=255) aaaTGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGc > 1:569685/1‑150 (MQ=255) aaTGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACTTGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCg < 2:2847069/150‑1 (MQ=255) aaTGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCg < 2:192454/150‑1 (MQ=255) aaTGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCg < 2:258738/150‑1 (MQ=255) tGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACCTGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCgat < 2:4013209/150‑1 (MQ=255) tGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCgat < 1:2641338/150‑1 (MQ=255) ccATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGAtt > 1:3778385/1‑150 (MQ=255) cATGCGGAAAGCCGGAGACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACACGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTg < 2:1613258/150‑1 (MQ=255) aTGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTgg > 2:1436557/1‑150 (MQ=255) tGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGgc < 2:3756039/150‑1 (MQ=255) gCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACACGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGgcg < 1:3860944/150‑1 (MQ=255) gCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGgcg < 1:749426/150‑1 (MQ=255) ggAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCa > 1:589662/1‑150 (MQ=255) ggAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCa < 1:5044280/150‑1 (MQ=255) aaaGCCGGATACCAGCCGACCACTGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCAcc < 2:1385784/150‑1 (MQ=255) aaGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCg > 2:4622555/1‑150 (MQ=255) aaGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCg > 2:1522269/1‑150 (MQ=255) cctgATACCAGCCGAACAATGGCGAGCATCTGGTAAGACTAAGAGAGCGTGAACTTGGCGTTGCCAATGACGCACAACTCAACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGacc < 1:4526348/147‑1 (MQ=255) ggATACCAGCCGACCACTGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGaccac < 1:5238892/150‑1 (MQ=255) ggATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGaccac > 2:4659620/1‑150 (MQ=255) gATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGaccacc < 1:215078/150‑1 (MQ=255) aTACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGaccacca > 2:3183911/1‑150 (MQ=255) gCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCa < 1:3280592/150‑1 (MQ=255) gCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCa < 1:5121611/150‑1 (MQ=255) cAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCAACAGAAACAACAAGATATGTTTGAGTGAGTAGCTGCTTGAAAAGAGTTCTATGATTGGCGCACCGACCACCACCCCCAGTTCat < 1:173546/150‑1 (MQ=255) tGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCataat > 2:4955692/1‑150 (MQ=255) tGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCataat < 1:338388/150‑1 (MQ=255) ggCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCataata > 1:4678251/1‑150 (MQ=255) cGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACg > 2:3379588/1‑150 (MQ=255) aGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACgag < 2:3241824/150‑1 (MQ=255) aTCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATc < 2:43323/150‑1 (MQ=255) aTCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATc < 2:3839784/150‑1 (MQ=255) tCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCa < 1:4438052/150‑1 (MQ=255) tCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCa < 2:1829917/150‑1 (MQ=255) cAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCat > 2:5084488/1‑150 (MQ=255) ggTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCatat < 2:4116707/150‑1 (MQ=255) ggTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCatat < 2:2947395/150‑1 (MQ=255) aaGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGcc < 2:4887987/150‑1 (MQ=255) aaGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGcc > 1:844204/1‑150 (MQ=255) gAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCcggcg < 2:4068821/150‑1 (MQ=255) gagagCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCa > 1:4173622/1‑150 (MQ=255) cGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAAt < 1:2088524/150‑1 (MQ=255) cGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAAt > 2:2144302/1‑150 (MQ=255) gTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATc > 2:1175716/1‑150 (MQ=255) gTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATc < 1:545664/150‑1 (MQ=255) tGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCg < 2:3538590/150‑1 (MQ=255) tGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCg < 2:3421860/150‑1 (MQ=255) tGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCg < 2:2657654/150‑1 (MQ=255) cATGGCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAAt < 2:4710664/150‑1 (MQ=255) aTGGCGTTGCTAATGACGCACAACGCCACCAGAAACAACAACATACGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAAtt < 1:987702/150‑1 (MQ=255) aTGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAACtt > 2:2485827/1‑150 (MQ=255) tGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTc > 2:1909388/1‑150 (MQ=255) ggCGTTGCCAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTcc < 1:1190174/150‑1 (MQ=255) ggCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATAcc > 2:4291465/1‑150 (MQ=255) gCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCt < 1:1147331/150‑1 (MQ=255) gTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTAc < 2:4459039/150‑1 (MQ=255) gTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTAc < 2:2793265/150‑1 (MQ=255) gTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTAc < 2:3304317/150‑1 (MQ=255) cAATGACGCACAACTCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTAt < 1:4292899/150‑1 (MQ=255) cAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTAt < 2:3930358/150‑1 (MQ=255) caACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTc > 1:4039148/1‑150 (MQ=255) aaCGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTcc > 1:1044902/1‑150 (MQ=255) cGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGt > 1:1605481/1‑150 (MQ=255) | TGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGCGTGAACATGGCGTTGCCAATGACGCACAACGCCACCAGAAACAACAAGATATGTTTGAGTGAGTAGCGGCTGGAAAAGAGTGCGATGATTGGCGCACCGACCACCACCCCCAGTGCATAATACGAGATCATATGCCCGGCGGCAGGAATCGAAATTCCTACGTTATGCGCCAGCTCCGT > CP009273/407562‑407859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |