| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 837,132 | C→T | 100% | intergenic (‑145/+120) | fiu ← / ← mcbA | catecholate siderophore receptor Fiu/colanic acid mucoidy stimulation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 837,132 | 0 | C | T | 99.3% | 963.4 / ‑2.8 | 296 | intergenic (‑145/+120) | fiu/mcbA | catecholate siderophore receptor Fiu/colanic acid mucoidy stimulation protein |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (139/154); total (140/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
| Rejected as polymorphism: Polymorphic base substitution creates a homopolymer stretch. | |||||||||||
Only 100 of 297 total aligned reads displayed.
CATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTCTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAGTACC > CP009273/836985‑837275 | cATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTa > 1:2327513/1‑150 (MQ=255) aTTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTAt > 1:866742/1‑150 (MQ=255) ttttGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATc > 1:2110785/1‑150 (MQ=255) ttttGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATc < 1:4435338/150‑1 (MQ=255) tttGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCa > 2:3656939/1‑150 (MQ=255) aGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTTTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAt > 1:357756/1‑150 (MQ=255) aGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAt > 1:1715042/1‑150 (MQ=255) aGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAt > 1:67427/1‑150 (MQ=255) aGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAt > 1:2423601/1‑150 (MQ=255) aGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAt > 2:2952525/1‑150 (MQ=255) ggTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAtt < 2:4620311/150‑1 (MQ=255) ggTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAtt < 2:106607/150‑1 (MQ=255) ggTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCAtt < 2:4185908/150‑1 (MQ=255) gTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTg > 1:1680921/1‑150 (MQ=255) gTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTg > 2:2311608/1‑150 (MQ=255) gTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTg > 1:2168355/1‑150 (MQ=255) tGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTgc > 1:5082059/1‑150 (MQ=255) tttttCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGa < 1:4174541/150‑1 (MQ=255) tttCTAAAATGTTGAAAAATTCACAGCCACGAGAAAGCCACTCTGCGGATGCGATGCCACTGAAAATCCCGTGATAGTGCTCGTGAAAGTGATAAAAATATTGAAAACCATTATCACTAGGAGCGATTATTTAACACCCAAAGCTCGaaa > 2:158236/1‑150 (MQ=255) tCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGaaaaa > 1:4420164/1‑150 (MQ=255) tCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGaaaaa < 1:4809344/150‑1 (MQ=255) cTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAg < 2:1916643/150‑1 (MQ=255) ttATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGa < 1:3014057/150‑1 (MQ=255) ttATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGa < 2:384028/150‑1 (MQ=255) ttATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGa < 2:5174715/150‑1 (MQ=255) atGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATa < 2:2479293/150‑1 (MQ=255) atGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATa > 2:4044487/1‑150 (MQ=255) tGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATAc < 1:1885595/150‑1 (MQ=255) ttGTAATTTTCTCTGCCAAGAGATAGGCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTAGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGATCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACat < 2:4532402/150‑1 (MQ=255) aTTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACatttatt > 1:2487562/1‑150 (MQ=255) aTTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACatttatt < 1:3739544/150‑1 (MQ=255) aTTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACatttatt > 2:1729857/1‑150 (MQ=255) ttttCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACatttattt < 1:4611143/150‑1 (MQ=255) ttttCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACatttattt < 1:2639263/150‑1 (MQ=255) aCTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACAtt < 1:185776/150‑1 (MQ=255) aCTGCCACGAGAAAGCCTCACTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGAGCGAAAAAGAAATACATTTATTTACAtt > 2:3892195/1‑150 (MQ=255) cTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTg < 2:584822/150‑1 (MQ=255) tGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGa < 2:3124848/150‑1 (MQ=255) gCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAg < 2:2045066/150‑1 (MQ=255) ccACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGt > 1:4260903/1‑150 (MQ=255) cACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGtt < 2:4958648/150‑1 (MQ=255) cGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCa > 1:4027316/1‑150 (MQ=255) cGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCa > 2:3083326/1‑150 (MQ=255) agaAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCata < 2:4229516/150‑1 (MQ=255) agaAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCata < 2:3925226/150‑1 (MQ=255) gaAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCatat > 1:2748427/1‑150 (MQ=255) gaAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCatat < 1:543224/150‑1 (MQ=255) aaGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATAttt < 1:560022/150‑1 (MQ=255) ccTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAACAAGAAATACATTTAGTTACATTGAGTTCATATTTGAt > 2:4770301/1‑150 (MQ=255) ccTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGAt < 1:1164300/150‑1 (MQ=255) ctctctGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATg < 2:5276108/150‑1 (MQ=255) ctctGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGtt < 2:2752158/150‑1 (MQ=255) tGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGttttt > 1:4475426/1‑150 (MQ=255) gCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGtttttt < 1:4370824/150‑1 (MQ=255) cGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTg < 2:4710361/150‑1 (MQ=255) atgcgatgcCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGAtt > 2:3408555/1‑150 (MQ=255) atgcgatgcCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGAtt < 1:3508081/150‑1 (MQ=255) gcgatgcCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTAc < 2:803411/150‑1 (MQ=255) cgatgcCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACa < 1:5028178/150‑1 (MQ=255) gcCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAAc > 1:1080175/1‑150 (MQ=255) cACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAg < 1:3863843/150‑1 (MQ=255) tGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACg < 1:4679352/150‑1 (MQ=255) aaTCCCGTGATAGTGCTCGTGATAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGaaaa < 1:2080619/150‑1 (MQ=255) tCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACt < 1:1274532/150‑1 (MQ=255) tCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACt < 1:2025793/150‑1 (MQ=255) tCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACt < 1:4528256/150‑1 (MQ=255) gATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATcc > 1:1994537/1‑150 (MQ=255) gCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGc > 1:286122/1‑150 (MQ=255) cTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCg > 2:2089869/1‑150 (MQ=255) tCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCAAGAGGCGa > 2:201274/1‑150 (MQ=255) gTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAAt < 1:3904554/150‑1 (MQ=255) gTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAAt < 1:4756299/150‑1 (MQ=255) aaaGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCa < 1:3290161/150‑1 (MQ=255) aaGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAg > 1:3993447/1‑150 (MQ=255) gTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGtt < 1:1505299/150‑1 (MQ=255) gATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTAc > 1:3216728/1‑150 (MQ=255) ataataATTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACg > 1:2932914/1‑150 (MQ=255) ataatTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTtg > 2:3203647/1‑150 (MQ=255) ataatTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTtg < 2:3336780/150‑1 (MQ=255) ataatTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTAAGTtg > 2:3605927/1‑150 (MQ=255) atTTTGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTtggtg > 1:1169185/1‑150 (MQ=255) atTTTGATAAGAATTATCACTTGGAGAGATTTTTTATCACACATTGCGCGAAAAAGAAATACATTTATTTACATTGTGTTCTTATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTtggtg < 1:526472/150‑1 (MQ=255) tGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGt > 1:2794072/1‑150 (MQ=255) tGATAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGt > 2:2563709/1‑150 (MQ=255) aTAAGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGGTGGTGGGGTTa > 2:5214078/1‑150 (MQ=255) tAAGCATTATCACTTGGAGCGATTTTATATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTAt < 2:1374207/150‑1 (MQ=255) aaGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGACTGCAGTTACGTTGGTGGGGTTAtt > 2:861244/1‑150 (MQ=255) aGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACATACGAAAACTGCATCAAGAGGCGAATGCAGTTACGTTGGTGGGGTTAttt > 1:1568521/1‑150 (MQ=255) aGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTAttt > 2:430063/1‑150 (MQ=255) aGCATTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTAttt < 2:1822286/150‑1 (MQ=255) aTTATCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACATACGAAAACTGCATCCAGAGGCGAATGAAGTTACGTTGGTGGGGTTATTTGTa > 2:119320/1‑150 (MQ=255) tCACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATg > 1:2440446/1‑150 (MQ=255) cACTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTGACGTTGGTGGGGTTATTTGTAGATgg > 2:962526/1‑150 (MQ=255) cTTGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGtt < 2:2185419/150‑1 (MQ=255) tGGAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGc < 2:1874239/150‑1 (MQ=255) gAGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAg < 1:967202/150‑1 (MQ=255) agagATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAGt < 1:3515602/147‑1 (MQ=255) aGCGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAGt < 1:1527144/150‑1 (MQ=255) cGATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAGTAc > 1:4957268/1‑150 (MQ=255) gATTTTTTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAGTAcc < 1:3314183/150‑1 (MQ=255) | CATTTTGCAGGTGACTTTTTCTTATATGTTGAAATTTTCACTGCCACGAGAAAGCCTCTCTGCGGATGCGATGCCACTGTTAATCCCGTGATAGTGCTCGTGAAAGTGATAATAATTTTGATAAGCATTATCACTTGGAGCGATTTTCTATCACCCATTGCGCGAAAAAGAAATACATTTATTTACATTGAGTTCATATTTGATGTTTTTTGATTACAAAACAGACGAAAACTGCATCCAGAGGCGAATGCAGTTACGTTGGTGGGGTTATTTGTAGATGGTTGCAGTACC > CP009273/836985‑837275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |