| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,097,943 | T→A | 66.5% | N19Y (AAT→TAT) | csgE ← | curlin secretion specificity factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,097,943 | 0 | T | A | 66.5% | 415.7 / inf | 346 | N19Y (AAT→TAT) | csgE | curlin secretion specificity factor |
| Reads supporting (aligned to +/- strand): ref base T (61/55); new base A (118/111); total (180/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01 | |||||||||||
Only 100 of 347 total aligned reads displayed.
CGTGCACTGGGCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATGCGTTTT > CP009273/1097795‑1098091 | tGCACTGGGCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATAccc > 1:2108379/1‑150 (MQ=255) gCACTGGGCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCt > 2:1916581/1‑150 (MQ=255) aCTGGGCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTgc > 1:1712043/1‑150 (MQ=255) gggCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTgcggc > 1:3544700/1‑150 (MQ=255) ggCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTgcggcg > 2:1628228/1‑150 (MQ=255) ggCCTTTCATTAATCGTTAAGATACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGAAAAAATCAAGGCCAAAAGAAGAAACAGTATGGTCAGTTATCAATCCCGGGAATACTAACAAAAATGCGTGAAGATTCCCTgcggcg > 2:734305/1‑150 (MQ=255) gCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGa > 1:1444891/1‑150 (MQ=255) aTTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGaaa < 2:171692/150‑1 (MQ=255) aTCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCt > 2:3069770/1‑150 (MQ=255) aTCGTTAAGTTA‑CCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTg < 1:17475/150‑1 (MQ=255) tCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTg > 2:3794254/1‑150 (MQ=255) gTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTgcc < 1:2938170/150‑1 (MQ=255) ttAAGTTACCCGTATAGTCACTGTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTgccg < 1:3760284/150‑1 (MQ=255) aaGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTgccgcc > 2:2561801/1‑150 (MQ=255) gTTACCCGTATATTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGACATTCTGCCGCcac > 2:1573706/1‑150 (MQ=255) aCCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAAt > 2:3396690/1‑150 (MQ=255) cccGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATc < 1:660042/150‑1 (MQ=255) ccGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATcc < 1:2672360/150‑1 (MQ=255) ccGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATcc < 1:4073457/150‑1 (MQ=255) cGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCa < 2:1135102/150‑1 (MQ=255) gTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAg > 1:1915607/1‑150 (MQ=255) gTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAg > 2:4586111/1‑150 (MQ=255) aGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTa > 1:4290164/1‑150 (MQ=255) aCTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATATATGAAACAGAATGGTCAGTTAGCAATCCCGGTACTTCTACATCAACGGCGTGAAGAAACCCTGCGGCGAACAGAAATTCTTCATCCACAAACCAGCGaaaaaa > 2:182013/1‑148 (MQ=255) tttCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAAc < 2:4053401/150‑1 (MQ=255) tttCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAAc < 1:1563264/150‑1 (MQ=255) ttCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACg > 2:2300780/1‑150 (MQ=255) ttCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACg > 1:5003336/1‑150 (MQ=255) tCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGt > 1:4730942/1‑150 (MQ=255) cccATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGtt < 2:3890107/150‑1 (MQ=255) ccATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGttt > 2:2420278/1‑150 (MQ=255) ccATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGttt < 2:1518322/150‑1 (MQ=255) cATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTc < 1:221159/150‑1 (MQ=255) cATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTc > 2:5158478/1‑150 (MQ=255) aTTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCa < 1:2247403/150‑1 (MQ=255) aTTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCa > 2:1081221/1‑150 (MQ=255) ttATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATg > 1:63624/1‑150 (MQ=255) ttATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATg < 2:4296711/150‑1 (MQ=255) tATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATgg > 2:2479157/1‑150 (MQ=255) tATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATgg < 2:3472080/150‑1 (MQ=255) tCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCt > 2:1491588/1‑150 (MQ=255) cACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCtt > 1:2502239/1‑150 (MQ=255) cACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCtt > 1:3871185/1‑150 (MQ=255) cACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCtt > 1:2891333/1‑150 (MQ=255) aCTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCttt < 1:3794254/150‑1 (MQ=255) aCTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCttt < 2:2881296/150‑1 (MQ=255) cTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATACCGTTTCATGGCTTTa < 1:3220600/150‑1 (MQ=255) cTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTa > 1:2962522/1‑150 (MQ=255) aaaGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATc > 1:2728189/1‑150 (MQ=255) aaaGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATc < 1:4419178/150‑1 (MQ=255) aGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGc < 1:797690/150‑1 (MQ=255) ggCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGcc > 1:5170344/1‑150 (MQ=255) gCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCt > 1:5308114/1‑150 (MQ=255) ggTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAgg > 2:2139193/1‑150 (MQ=255) ggTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAgg > 2:636031/1‑150 (MQ=255) aaaaTCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTAt > 1:2789260/1‑150 (MQ=255) aaTCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCg > 1:2061169/1‑150 (MQ=255) aTCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGt > 1:3270666/1‑150 (MQ=255) cATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGttt < 1:3607194/150‑1 (MQ=255) tGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGc < 1:1281706/150‑1 (MQ=255) tGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGc > 1:5220034/1‑150 (MQ=255) gCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGccc > 2:1284688/1‑150 (MQ=255) ccAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGTGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCa < 1:3363428/150‑1 (MQ=255) cAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAg > 1:3097314/1‑150 (MQ=255) cAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAg < 1:4806844/150‑1 (MQ=255) aaTAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAgg > 1:3889458/1‑150 (MQ=255) aTAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGa > 2:4443630/1‑150 (MQ=255) aTAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGa < 1:231549/150‑1 (MQ=255) aTGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAAcc > 2:4772036/1‑150 (MQ=255) tGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCg < 1:1065042/150‑1 (MQ=255) cAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTtgt > 1:4620152/1‑150 (MQ=255) aGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTtgtg > 1:4990135/1‑150 (MQ=255) aTGGTCAGTTTGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTcc < 2:3544700/150‑1 (MQ=255) aTGGTCAGTTAGCAATCCCGGGACTTCTTCCTCAACGTCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCTCAACAATCCAGCGTAAATAACGTTTGATGGATTTATCGCATGTGGTTATCGTTTGCCCAGGAAACCGCTTGTGTcc < 2:4388148/150‑1 (MQ=255) gTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGt > 1:5098315/1‑150 (MQ=255) aGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGtttt > 2:2074458/1‑150 (MQ=255) gTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGttttt > 1:1424620/1‑150 (MQ=255) gTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGttttt > 2:5038732/1‑150 (MQ=255) tAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTa > 2:4126324/1‑150 (MQ=255) gCAATCCCGGGACTTCTACCTCACCGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACg < 2:2718535/150‑1 (MQ=255) gCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACg < 2:28013/150‑1 (MQ=255) cccGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTAt > 1:1150446/1‑150 (MQ=255) ccGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTAtc < 2:3250003/150‑1 (MQ=255) cGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTAtct < 1:4106159/150‑1 (MQ=255) cGGGACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTGTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTAtct < 2:4242846/150‑1 (MQ=255) gggACTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTAtctt < 1:980856/150‑1 (MQ=255) aCTTCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTGTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATcttctt < 2:4891575/150‑1 (MQ=255) ttCTACCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGa > 2:3014448/1‑150 (MQ=255) aCCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAg > 1:165734/1‑150 (MQ=255) aCCTCAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAg > 2:2008749/1‑150 (MQ=255) cAACGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATta < 2:4970636/150‑1 (MQ=255) aaCGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATtat < 2:2687636/150‑1 (MQ=255) aaCGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATtat < 2:2085790/150‑1 (MQ=255) aaCGGCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATtat < 2:3519931/150‑1 (MQ=255) ggCGTGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATaaa < 2:4998298/150‑1 (MQ=255) tGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATg < 1:1972080/150‑1 (MQ=255) tGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATg < 2:5320843/150‑1 (MQ=255) tGAAGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATg < 1:4941408/150‑1 (MQ=255) aaGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATGCg > 1:2168070/1‑150 (MQ=255) aGATACCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATGCGt > 1:3016329/1‑150 (MQ=255) | CGTGCACTGGGCCTTTCATTAATCGTTAAGTTACCCGTATAGTCACTTTCCCATTTATCACTAAAGGCTCGGTAAAAATCATGGCCAATAGATGAAACAGTATGGTCAGTTAGCAATCCCGGGACTTCTACCTCAACGGCGTGAAGATTCCCTGCGGCGAACAGAAATTCTGCCGCCACAATCCAGCGTAAATAACGTTTCATGGCTTTATCGCCTGAGGTTATCGTTTGCCCAGGAAACCGCTTGTGTCCGGTTTTTTACGGCTATCTTCTTGAAAAGATTATAAAGATGCGTTTT > CP009273/1097795‑1098091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |